Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 159 2e-34
seq566 125 5e-24
seq424 91.5 1e-13
>seq1153
Length=1501042
Score = 159 bits (176), Expect = 2e-34
Identities = 172/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||||||| | |||||||||||| | ||| ||||||||| ||||| ||||| ||
Sbjct 1169597 CCCCCCCTCAAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1169538
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| || || ||||| ||||||| | |||||||| | ||
Sbjct 1169537 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1169478
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| ||||||||||| | || || |||||| | || | ||| ||| ||| ||
Sbjct 1169477 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1169418
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| ||||| |||||||| || ||||||||||||
Sbjct 1169417 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 1169370
Score = 152 bits (168), Expect = 3e-32
Identities = 173/230 (75%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| |||||||| | |||||||||||| | ||| ||||||||| ||||| ||||| ||
Sbjct 1171026 CCCCCCCTCAAGCGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1170967
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| ||||| |||| ||||| || || ||||| ||||||| | |||||||| | ||
Sbjct 1170966 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1170907
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGA 34928
| ||||||||||| | || || ||||| || || || | ||| ||| ||| |
Sbjct 1170906 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCCA 1170849
Query 34929 CATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
| || | ||| |||||||| ||||| | |||||| || ||||||||||||
Sbjct 1170848 CCTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 1170799
Score = 145 bits (160), Expect = 5e-30
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1169354 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169295
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || ||||| ||||||| | |||||||| | || | |||||||||||
Sbjct 1169294 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1169235
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || |||||| | || | ||| ||| ||| || || | ||| ||||||
Sbjct 1169234 TGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 1169175
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| ||||| |||||||| || ||||||||||||
Sbjct 1169174 TTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 1169142
Score = 134 bits (148), Expect = 9e-27
Identities = 160/215 (74%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1169126 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169067
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || ||||| ||||||| | |||||||| | || | ||||| || ||
Sbjct 1169066 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCTTTTTCC 1169007
Query 34886 TTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGG 34943
| || || |||||| || || || | ||| ||| ||| || || | ||| ||||
Sbjct 1169006 TGGATCTTCCCTTTGAC--ATTCTCAATGGTGTCACTGGGCTCCACCTCCAGGGTGATGG 1168949
Query 34944 TCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| ||||| | |||||| || ||||||||||||
Sbjct 1168948 TCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 1168914
Score = 98.7 bits (108), Expect = 6e-16
Identities = 93/119 (78%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||||||| | ||| ||||||||| ||||| ||||| || ||| ||||| ||||
Sbjct 1170783 AGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1170724
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| ||||||| | |||||||| | || | |||||||||||
Sbjct 1170723 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTC 1170665
>seq566
Length=2972453
Score = 125 bits (138), Expect = 5e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | |||||||||||| | ||| ||| ||||| ||||| || || ||
Sbjct 801241 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 801300
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| || | ||||||||| | ||
Sbjct 801301 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 801360
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | || || || ||| | | || | ||| ||| ||| ||
Sbjct 801361 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 801420
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || ||||| |||||
Sbjct 801421 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCAT 801467
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||||| | || ||||| || | ||| ||| ||||| ||||| || || ||
Sbjct 801013 CCACCCCTCAGACGAAGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAA 801072
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
|| |||| |||| ||||| ||||| || || ||||| || | |||||||| | ||
Sbjct 801073 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGG 801132
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || || || || | || || || ||| | | || | ||| ||| ||| ||
Sbjct 801133 ATGCCTTCTTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 801192
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| | ||| |||||||| || || |||||||| || |||||||||||
Sbjct 801193 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
>seq424
Length=11562000
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/212 (70%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|||||||||| | |||| ||| ||||| || || ||||| || | || | | ||
Sbjct 7322007 AGGACCAGGTTCAAGGTGGACTCTTTCTGGATATTGTAGTCTGAGAAAGTGTGGCCGTCC 7321948
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
||||| || || || | | ||||| || | ||||| |||| | |||||||||||
Sbjct 7321947 TCCAGCTGTTTGCCCACACAAATCAGACGCCGTTGGTCAAGCGGGATGCCCTCCTTGTCT 7321888
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| |||||| | || | ||||||| ||| || |||| ||| ||||||
Sbjct 7321887 TGGATTTTGGCTTTGACCTTCTCCATGGTATCATTGGTCTCAACGTCAAGGGTGATGGTC 7321828
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| ||| | ||||| ||||| ||||||||
Sbjct 7321827 TTGCCCAT--CCGTCTTCACAAATATCTGCAT 7321798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325686929285501
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