Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_024382.1
Length=137090
Score E
Sequences producing significant alignments: (Bits) Value
seq547 118 9e-22
>seq547
Length=10008264
Score = 118 bits (130), Expect = 9e-22
Identities = 500/774 (65%), Gaps = 82/774 (11%)
Strand=Plus/Minus
Query 1040 GTCTAGTTGTTCTGGTTTCTTGTAAATATGCCCACAGCTCTAGCTTCTGGTCTGAAAAAG 1099
|||||||||||| | |||| | | || |||| ||||||| ||||| |||||
Sbjct 1763463 GTCTAGTTGTTCCCATCTCTTCCTGGTGTATCCGCAGCCCTAGCTTGGGGTCT-AAAAAT 1763405
Query 1100 AGTAGGTTTCTCTTGAGAGTTAA-GGAAGGCATTTTAAAGAAAAGGCTTAGaaaaaaaaT 1158
|||||| ||| | | | || ||||||||||||||||||| ||| | || || ||||
Sbjct 1763404 AGTAGGCCTCTTCTAGGGGCAAACGGAAGGCATTTTAAAGAAATGGCCTGGAGAAGAAAT 1763345
Query 1159 CTGGT-GGGCACTTACATATTCTTCCATAAGTT--TTGAAAATGAGAACTGTAGTTCTGT 1215
||| |||||||||| || |||| || |||| || | ||| | | ||| |||
Sbjct 1763344 CTGTAAGGGCACTTACGTAGTCTTGCAAAAGTCCCTTAGACATGGG--CCGTAATTCCAA 1763287
Query 1216 GATTACAGCTGATTGTATGTCCCGTGGT---AGTGGATGGCCG---------TGGGAGGA 1263
||||| | | | | ||| | |||| ||| ||||| | |||||||
Sbjct 1763286 GATTAT---TTTTCGGACGTCACTTGGTTGTAGTCGATGGGTGGGTGCCATATGGGAGGG 1763230
Query 1264 GAGCAAGGCTCCGGAACAGCAGAGCAGGAACAGGGCAAGCCCTGAAGATTTTGTAAAAAT 1323
||||||| | | ||||||||||| |||||||||| || | | | || | |||
Sbjct 1763229 CAGCAAGGTTTCCATGCAGCAGAGCAGAAACAGGGCAAACCTGGCGGGTCCTGGAGAAAA 1763170
Query 1324 AGAGTAATGC------CCACACACCCCCACCTGCCCCATACCTTAACCTGCCCAAGCTTT 1377
| | | |||| |||| || || ||||| | || ||| || |
Sbjct 1763169 AAAATGATGCTGTGGGCCACGTGGCCAGAC--GCCCCCTGCCCA------CCCCAGTTGC 1763118
Query 1378 CACCACCGAAGCTGTGCCGGA-------CTG----AGCCCCATCCAGTCTTTCTCTTTGT 1426
||||||||||| || || ||| |||||| ||||| | | ||| | |
Sbjct 1763117 AACCACCGAAGCCGTTGTTGAGCAACCACTGGCCAAGCCCC-TCCAGAGTCT-TCTCTAT 1763060
Query 1427 CTAGGGAAACTCGACCGCACCCACCAGCATCAATGGCTGTAGGACCTATCGATACCTGAG 1486
| | | || |||| | | || | | || ||| ||| | | ||||||
Sbjct 1763059 CCAACGGGACGAGACCACGCTCATGA--AACA--GGCATCAGGGCACAGTAGTACCTGCA 1763004
Query 1487 GGGGATACTATAGCAGGAGAGAGCG---AGGCCGCCGCTTTGGCAACAGCTGCTAGAGTG 1543
|||| | || || |||||||| ||| | | ||| |||||||||| ||||||
Sbjct 1763003 TGGGAGAGCATGGC--GAGAGAGCACACAGGGC-CTGCTCCGGCAACAGCTTCTAGAGCT 1762947
Query 1544 AGATGTGCTCGCTATACTTTTAGGGAACTGTATATAAAGGGCTAGTTGTAAGG---AGGA 1600
|||||||||||| || | |||| | ||||||||||| |||||| ||| | ||
Sbjct 1762946 AGATGTGCTCGCCATGGCCTCTGGGAGAT--ATATAAAGGGCCAGTTGTGAGGGAAAAGA 1762889
Query 1601 GCACTAAAAGTACCGCCCACGGTAAAGTCATTACTCAG-----------AAAACA-TTTC 1648
|| | || || ||||||| || ||| ||||| ||||| |||||| ||||
Sbjct 1762888 GCGATCAACGTCCCGCCCATGGCAAAATCATTGCTCAGCTTTTCTCCAGAAAACACTTTC 1762829
Query 1649 AAATTTATGCCATCTGATCTTGGATAAAAGCAAGGCTCGAAGGAAATG---AAGTTACCC 1705
|| || |||| || ||| | ||||| | || |||||||||| | |||||||
Sbjct 1762828 AATATTCTGCCCCACGAGGCTGGGTGAAAGCGGGACTGGAAGGAAATGCTGAGGTTACCC 1762769
Query 1706 TTAAGATGGGCAGATGCTTGACGCACTGCATATACACACCGG---GCACCCACA 1756
| ||| ||||||||||| |||| || | || | |||||| || |||| ||||
Sbjct 1762768 TCAAGGTGGGCAGATGCCTGACTCAGTACAGACACACACAGGAAAGCACACACA 1762715
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 438551892122000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |