Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq566 95.1 3e-14
seq1477 91.5 3e-13
>seq566
Length=2972453
Score = 95.1 bits (104), Expect = 3e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| |||||
Sbjct 801224 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 801165
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || |||||||| || || ||| || || || |||||
Sbjct 801164 GTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 801105
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| ||||| | ||| | | ||||||||| |||||||||||||
Sbjct 801104 GCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 801045
Query 206365 ACTCTTCACCTTGTT 206379
||||| || || |||
Sbjct 801044 ACTCTCCATCTGGTT 801030
Score = 84.2 bits (92), Expect = 5e-11
Identities = 135/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || || || || ||||| |||| ||||| |||||| |||||
Sbjct 801452 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 801393
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| || || || || || || || ||| || || || |||||
Sbjct 801392 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTT 801333
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || |||||| |||| ||||| | ||| | | ||||||||| |||||||||||||
Sbjct 801332 GCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 801273
Query 206365 ACTCTTCACCTTGT 206378
|| || ||||| ||
Sbjct 801272 ACCCTGCACCTGGT 801259
>seq1477
Length=8748460
Score = 91.5 bits (100), Expect = 3e-13
Identities = 153/215 (71%), Gaps = 11/215 (5%)
Strand=Plus/Minus
Query 206178 ATTTTGC-AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAG 206236
|||||| ||||| || |||||||| || |||| | | || || ||| || || |||
Sbjct 7843988 ATTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTCGAACCCTCGGATACAA 7843929
Query 206237 TCGAATCAGTA---AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAA 206293
| ||| |||| |||| || ||||| || || |||| |||| || | || |
Sbjct 7843928 TAGAA--AGTATGAAAGCCAA-GATTCGGGATAAGGAAGAAATTCCTCCTTATCAGCAGA 7843872
Query 206294 GACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCC 206353
| | ||||| || || ||||| ||||||||||| | |||||| | || |||||| | |
Sbjct 7843871 GTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTC 7843812
Query 206354 AGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388
|||| ||||| | ||||| |||| |||||||||
Sbjct 7843811 AGAAGGAGTC--CACTTCATCTTG--TTGAGACTT 7843781
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181798404865159
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |