Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq566 95.1 3e-14 seq1477 91.5 3e-13 >seq566 Length=2972453 Score = 95.1 bits (104), Expect = 3e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 801224 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 801165 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || |||||||| || || ||| || || || ||||| Sbjct 801164 GTGAAGGCCAAGATCCAGGATAAAGAAGGCATCCCCCCTGACCAGCAGAGGCTCATCTTT 801105 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| ||||| | ||| | | ||||||||| ||||||||||||| Sbjct 801104 GCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCC 801045 Query 206365 ACTCTTCACCTTGTT 206379 ||||| || || ||| Sbjct 801044 ACTCTCCATCTGGTT 801030 Score = 84.2 bits (92), Expect = 5e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || || || ||||| |||| ||||| |||||| ||||| Sbjct 801452 AAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCCAGTGACACCATCGAAAAC 801393 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||| || || || || || || || ||| || || || ||||| Sbjct 801392 GTGAAGGCCAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAGCAGAGGCTCATCTTT 801333 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || || |||||| |||| ||||| | ||| | | ||||||||| ||||||||||||| Sbjct 801332 GCAGGCAAGCAGCTGGAGGATGGCCGCACTCTTTCTGATTACAACATCCAGAAAGAGTCG 801273 Query 206365 ACTCTTCACCTTGT 206378 || || ||||| || Sbjct 801272 ACCCTGCACCTGGT 801259 >seq1477 Length=8748460 Score = 91.5 bits (100), Expect = 3e-13 Identities = 153/215 (71%), Gaps = 11/215 (5%) Strand=Plus/Minus Query 206178 ATTTTGC-AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAG 206236 |||||| ||||| || |||||||| || |||| | | || || ||| || || ||| Sbjct 7843988 ATTTTGTGAAAACCCTTACAGGAAAGACCATCAGTGTTGAGGTCGAACCCTCGGATACAA 7843929 Query 206237 TCGAATCAGTA---AAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAA 206293 | ||| |||| |||| || ||||| || || |||| |||| || | || | Sbjct 7843928 TAGAA--AGTATGAAAGCCAA-GATTCGGGATAAGGAAGAAATTCCTCCTTATCAGCAGA 7843872 Query 206294 GACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCC 206353 | | ||||| || || ||||| ||||||||||| | |||||| | || |||||| | | Sbjct 7843871 GTTTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTC 7843812 Query 206354 AGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTT 206388 |||| ||||| | ||||| |||| ||||||||| Sbjct 7843811 AGAAGGAGTC--CACTTCATCTTG--TTGAGACTT 7843781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181798404865159