Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 116 4e-21
seq566 87.8 2e-12
seq1477 84.2 2e-11
seq602 84.2 2e-11
>seq1153
Length=1501042
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | || ||||| || ||||| ||||| || |||||||||||
Sbjct 1169141 CCCCCCCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1169082
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||||||||| ||||| ||||| | |||||| || || ||
Sbjct 1169081 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1169022
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| |||||||| || || || |||||| || | ||||| | |||||
Sbjct 1169021 ATGCCCTCTTTTTCCTGGATCTTCCCTTTGACATTCTCAATGGTGTCACTGGGCTCCACC 1168962
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || || || || ||||| || |||||
Sbjct 1168961 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1168915
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| || | || ||||| || ||||| ||||| || |||||||||||
Sbjct 1169369 CCCCCCCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1169310
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || |||||||| || ||||| ||||| | |||||| || || ||
Sbjct 1169309 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1169250
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| || | ||||| | |||||
Sbjct 1169249 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 1169190
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 1169189 TCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||| || ||||| || ||||| ||||| || ||||||||||| | |||| |
Sbjct 1169585 CGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 1169526
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || ||||||||||| ||||| ||||| | |||||| || || || ||||| || ||
Sbjct 1169525 TCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 1169466
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || ||||| || | ||||| | ||||| || || || |||
Sbjct 1169465 TCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 1169406
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || | || || ||||| || |||||
Sbjct 1169405 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 95.1 bits (104), Expect = 1e-14
Identities = 150/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558
|||| || ||||| || ||||| ||||| || ||||||||||| | |||| |
Sbjct 1171014 CGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 1170955
Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618
|| || |||||||| || ||||| ||||| | |||||| || || || ||||| || ||
Sbjct 1170954 TCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTG 1170895
Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678
|| || || || ||||| || | ||||| | ||||| || || || |||
Sbjct 1170894 TCCTGGATCTTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 1170835
Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || || ||||| || |||||
Sbjct 1170834 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||||||||| || | || ||||| || ||||| ||||| || |||||||||||
Sbjct 1170798 CCTCCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1170739
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || |||||||| || ||||| ||||| | |||||| || || ||
Sbjct 1170738 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1170679
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || || || ||
Sbjct 1170678 ATGCCCTCCTTGTCCTGGATCTT 1170656
>seq566
Length=2972453
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || || || |||| || ||||| || || || || || || |||||||| || |
Sbjct 801241 CCACCCCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAA 801300
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | || || ||||| ||||||||||| || | | |||||| || || ||
Sbjct 801301 AGAGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGG 801360
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || || || || | ||||| | |||||
Sbjct 801361 ATGCCCTCCTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCCACC 801420
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || ||||| || ||||| | || || ||||| ||||||||||||
Sbjct 801421 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTTG 801471
>seq1477
Length=8748460
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/226 (69%), Gaps = 6/226 (3%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| ||||| || || || |||| ||||| |||||||||||||| | ||| || |
Sbjct 7843782 AGTCTCAACAAGA--TGAAG--TGGACTCCTTCTGAATGTTGTAGTCAGACAA-AGTACG 7843836
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || || || ||||| ||||| ||||||| |||||||| || || || ||||
Sbjct 7843837 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAAACTCTGCTGATAAGGAGGAATTTCTTC 7843896
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674
|| || |||| || ||| | || | ||| || || | ||| || || | | |
Sbjct 7843897 CTTATCCCGAATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCGACCTCAACACT 7843956
Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720
||||| || || || | ||||| || ||| ||||||| ||| ||
Sbjct 7843957 GATGGTCTTTCCTGTAAGGGTTTTCACAAAATTTTGCATCTTGGTT 7844002
>seq602
Length=3264241
Score = 84.2 bits (92), Expect = 2e-11
Identities = 156/224 (70%), Gaps = 4/224 (2%)
Strand=Plus/Minus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554
|||| ||||||||| || || |||| |||||||||||||||||||| | ||| || ||
Sbjct 2398642 AGTCTCAACACGAGATGAAGAATGGACTCCTTTTGAATGTTGTAGTCAGTCAAAGG-ATG 2398584
Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614
|| || | || |||| |||| |||| | ||||||| | || || || ||||
Sbjct 2398583 TCCATCTTC-AATTGCCTGCCAGCAAGGATCAGTCTCTGCTGAACAGGAGGAATTTCTTC 2398525
Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCC-AATGTGTCGGACGATTCCACGTCGAGAG 134673
|| || ||||| | || | | ||| | ||| || || | |||||| |||||||
Sbjct 2398524 CTTATCCTGAATCCTGGCCTTTAACATTTCCTATTGTATCCGAGGGTTCCACCTCGAGAG 2398465
Query 134674 TAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
| ||||| || | | | ||||| ||| |||| | ||| |||
Sbjct 2398464 TGATGGTCTTCACCCTAAGAGTTTCCACGGAAATCTACATCTTG 2398421
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505389056447080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |