Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq515 91.5 2e-13
seq747 84.2 3e-11
>seq515
Length=2727018
Score = 91.5 bits (100), Expect = 2e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694
||||| ||||||||||| || |||| | || || ||||| | || ||| |||
Sbjct 2713148 ACTTCCTCTATTTCTGGATCAAAAATCCGTTCATAAATGAGCTGTGCAATTCGATCACCC 2713207
Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754
|| || || | ||| || || | ||||||||||| || | ||| | |||||| ||
Sbjct 2713208 TTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAATAGCACAACACCCACATTTCCTCTA 2713267
Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814
|||||| |||||| || || || | |||||| || || || || ||||| || ||
Sbjct 2713268 TAATCTTCATCTATGACGCCAGCTCTTACATCTATGAAGTGTTTCGCAGCCAAGCCAGAA 2713327
Query 22815 CTAGGAGATATTCTTCCATA 22834
| |||| || |||||||||
Sbjct 2713328 CGGGGAGCTACTCTTCCATA 2713347
>seq747
Length=14734251
Score = 84.2 bits (92), Expect = 3e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891
|||||||||||||||||| | ||||| || || ||||| || ||||| || |||||
Sbjct 10991802 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 10991743
Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTAT 32950
||||| ||| | || || | | | |||||||| |||||||||| ||| || || ||
Sbjct 10991742 TTAACTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAAAGATACTTGACCAT 10991684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 603169648694960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |