Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq515 91.5 2e-13 seq747 84.2 3e-11 >seq515 Length=2727018 Score = 91.5 bits (100), Expect = 2e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 2713148 ACTTCCTCTATTTCTGGATCAAAAATCCGTTCATAAATGAGCTGTGCAATTCGATCACCC 2713207 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||||| || | ||| | |||||| || Sbjct 2713208 TTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAATAGCACAACACCCACATTTCCTCTA 2713267 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| || || || | |||||| || || || || ||||| || || Sbjct 2713268 TAATCTTCATCTATGACGCCAGCTCTTACATCTATGAAGTGTTTCGCAGCCAAGCCAGAA 2713327 Query 22815 CTAGGAGATATTCTTCCATA 22834 | |||| || ||||||||| Sbjct 2713328 CGGGGAGCTACTCTTCCATA 2713347 >seq747 Length=14734251 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891 |||||||||||||||||| | ||||| || || ||||| || ||||| || ||||| Sbjct 10991802 GCATTTTTTGGAGCACAGCTGAATTCCTTCATCCATGTGATTATGTACTCATACTACGGG 10991743 Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTAT 32950 ||||| ||| | || || | | | |||||||| |||||||||| ||| || || || Sbjct 10991742 TTAACTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAAAGATACTTGACCAT 10991684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603169648694960