Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_028379.1 Length=205896 Score E Sequences producing significant alignments: (Bits) Value seq517 172 7e-38 >seq517 Length=11963285 Score = 172 bits (190), Expect = 7e-38 Identities = 270/381 (71%), Gaps = 8/381 (2%) Strand=Plus/Plus Query 13659 TATCTCGTGAGGCCCCTGAGCCTGGAAGAGGTCGAGTTTCCCATCGCCTACTCGATCGTG 13718 ||| |||| |||||| || ||||||| ||||||||||| || || || || ||| Sbjct 8483814 TATATCGTAGAGCCCCTTAGTAAAGAAGAGGCAGAGTTTCCCATTGCATATTCTATAGTG 8483873 Query 13719 ATCCACCACAAGATCGAGATGTTCGAGCGCCTCCTGAGGGCCATCTACGCCCCGCAGAAC 13778 | || ||||| ||||| ||| | || | ||||||||||||||||| || ||||| Sbjct 8483874 GTTCATCACAAAATCGAAATGCTTGACAGGCTCCTGAGGGCCATCTATATGCCTCAGAAT 8483933 Query 13779 CTCTACTGCGTCCACGTGGACTCCAAGTCCGGCGA--CGAGTTCATCCGGGGCGTCTCGG 13836 ||||||||| | ||||||||| || || | || | || ||| | || || Sbjct 8483934 CTCTACTGCATTCACGTGGACAGAAAATCAGAGGATTCCTTTTTGGCCGCG--GTGATGG 8483991 Query 13837 CCATCGCCAGGTGCTTCCCTAACGTGGCCCTGGCCCACCGGCTGCACGACGTGGTGTACG 13896 ||||||| |||||| |||||| | ||||| | |||| | ||||||||| | Sbjct 8483992 GCATCGCCTCCTGCTTCAGTAACGTCTTCGTGGCCAGTCAGCTGGAGAGCGTGGTGTATG 8484051 Query 13897 GCTCCTGGAGTCGCGTGCAGGCCGACCTCAGCTGCATGTCGGACCTGGACGCCTCCCCCG 13956 ||| |||||||| || ||||||||||||| ||||||| ||||| | || | Sbjct 8484052 CCTCTTGGAGTCGGGTTCAGGCCGACCTCAACTGCATGCAAGACCTCTA--CCGGATGAG 8484109 Query 13957 T-CA-AGTGGAGGTACCTGCTCAACCTGTGCGGGATGGACTTCCCGCTCAAGACCAACCT 14014 | || | ||||||||| || | || || ||||| ||||| ||||| | || |||||||| Sbjct 8484110 TGCAGACTGGAGGTACTTGATAAATCTTTGCGGCATGGATTTCCCTATTAAAACCAACCT 8484169 Query 14015 GGAGATCGTGCGGGCGCTGAA 14035 |||||| || ||| ||| || Sbjct 8484170 GGAGATTGTCCGGAAGCTCAA 8484190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658727021559040