Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 111 1e-19
>seq1153
Length=1501042
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||| |||| |||| ||||||||| |||||| || ||||| || || ||
Sbjct 1169595 CCCCCTC-AAG-CGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1169538
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 1169537 AGGGTGCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1169478
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || ||| | || ||||| | ||||||
Sbjct 1169477 ATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCAC 1169419
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || || || || || | || ||||| || |||||||||
Sbjct 1169418 CTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 1169370
Score = 111 bits (122), Expect = 1e-19
Identities = 165/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||| |||| |||| ||||||||| |||||| || ||||| || || ||
Sbjct 1171024 CCCCCTC-AAG-CGCAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGAC 1170967
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 1170966 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGG 1170907
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || | || ||||| | ||||||
Sbjct 1170906 ATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACATTCTCGATGGTGTCACTGGGCTCCAC 1170848
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
|||| ||| || || || || || || || ||||| || |||||||||
Sbjct 1170847 CTCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCATG 1170799
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| || || || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 1169370 GCCCCCCCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1169311
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 1169310 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 1169251
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| ||||||||||| |||| || | || ||| | || ||||| | |||||
Sbjct 1169250 GATGCCCTCCTTGTCCTGGATC-TTCGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCA 1169192
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707
| |||| ||| || || || || || | || ||||| || |||||||||
Sbjct 1169191 CCTCCAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 1169142
Score = 93.3 bits (102), Expect = 3e-14
Identities = 107/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| ||||| || || | |||| || |||||| |||||| || ||||| || || ||
Sbjct 1170799 GCCTCCTCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGA 1170740
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | ||||| || ||||| |||||||| || || | ||| ||||| || ||
Sbjct 1170739 CAGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGG 1170680
Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622
| ||||||||||| ||||||
Sbjct 1170679 GATGCCCTCCTTGTCCTGGATCTT 1170656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314723926900607
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |