Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq694 196 4e-45
seq489 141 8e-29
>seq694
Length=2958536
Score = 196 bits (216), Expect = 4e-45
Identities = 429/636 (67%), Gaps = 20/636 (3%)
Strand=Plus/Plus
Query 34217 GAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTG 34276
|||||||| |||||||| || |||| ||| | || |||||| || | |||||| |||||
Sbjct 59577 GAATTTCCTCTGCTGACAACCAAACCTGTATTCTAGAAGGGTGTTTTGGAGGAGTTGCTG 59636
Query 34277 TGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGG 34336
||||| | | ||| |||| ||| | ||| | || ||| ||| ||||| ||||||
Sbjct 59637 TGGTTTATCAAGGGATCCACAAACGCTTGGGAATTGTCTTCCAAGGGAGTGAAAATCTGG 59696
Query 34337 GACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCC-CATCTCGGGAGGAGGG 34395
||| | | ||||| ||||| | |||||| || || ||| || | | || ||||
Sbjct 59697 GACTCAAATGGGTCCTGAGACCTCTTGGACA-GCCGGTATTCTGCAACAGAGAAGAAGGG 59755
Query 34396 CGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAG 34455
||||| ||||| || || || || |||| | | || || |
Sbjct 59756 -GACTTAGGCCCAGTTTATAATTTTCAATGGAAAATA-------CAAAG-ATAAGA---- 59802
Query 34456 CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAA 34515
| | || ||||| || || |||| ||||| ||||| | ||||| ||||| | ||
Sbjct 59803 --ATTCAGATTATTCTGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAATCAA 59860
Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575
||| |||||||||||| ||| | |||| | |||||| || || ||||| ||| |
Sbjct 59861 AACCAACTGTGATGACAGAAGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCCTTT 59920
Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635
||||| ||| | | ||||| |||| ||||| |||||| | | ||||| ||||||||
Sbjct 59921 AATGGC--TCCTCTC-TGCCATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCTGTC 59977
Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695
||||||||| || | | || ||||||||||| | | ||||| | ||| | | ||
Sbjct 59978 CTGCCAGCTATACCGGAGCTCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCACCAG 60037
Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755
|| || |||||||| |||| ||| | || | || || || | || | |
Sbjct 60038 CTATGCCCTGCTCACCTACAGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTTCAT 60097
Query 34756 GCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCT 34815
||||| ||||| ||||| ||||| ||||||| || | |||| ||| || |||||
Sbjct 60098 ACATACTTTGGGAGATGCACATATTTACCTGAGTCATGTTGAGCTGCTGAAAATGCAGCT 60157
Query 34816 GCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAAT 34851
|| |||| || | || ||||| |||| || ||
Sbjct 60158 TCAGTGAGAACCAAGGCCTTTCCCGAAGCTTAAGAT 60193
Score = 196 bits (216), Expect = 4e-45
Identities = 429/636 (67%), Gaps = 20/636 (3%)
Strand=Plus/Minus
Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553
|| || |||| ||||| || | || |||| || ||||| || ||| |||| |
Sbjct 60193 ATCTTAAGCTTCGGGAAAGGCCTTGGTTCTCACTGAAGCTGCATTTTCAGCAGCTCAACA 60134
Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613
|| ||||||| ||||| ||||| ||||| ||||| | | || | || || ||
Sbjct 60133 TGACTCAGGTAAATATGTGCATCTCCCAAAGTATGTATGAAGTCACTGGGCTTCAGGCCT 60074
Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673
| || | ||| |||| |||||||| || || || | | ||| | ||||| |
Sbjct 60073 GTGGTGTGTACCATCCTGTAGGTGAGCAGGGCATAGCTGGTGACATTGGAGGGCACAACC 60014
Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733
| ||||||||||| || | | || ||||||||||||||||| ||||| | | ||||
Sbjct 60013 AGGCCCATGTCTCCTGAGCTCCGGTATAGCTGGCAGGACAGCTCACCATTTTCCAGGTAG 59954
Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793
|| ||||| |||| ||||| | | ||| ||||| | ||| ||||| || || ||||||
Sbjct 59953 AACTGGCAAAGGGAATGGCA-GAGAGGA--GCCATTAAAGGAAGATCTTTTGGATTCCAC 59897
Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853
| |||| | ||| |||||||||||| ||| || | ||||| ||||| | |||
Sbjct 59896 CCACACAGGATGATTCTTCTGTCATCACAGTTGGTTTTGATTGTGTCAATCACCTTTTGC 59837
Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913
|| ||||| |||| || || ||||| || | | | || || |
Sbjct 59836 AGTTGGTCTACTCCTTGACCAGAATAATCTGAAT------TCTTAT-CTTTG-------T 59791
Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG-GGAACCC 6972
| |||| || || || || ||||| ||||| |||| || | | || ||| |
Sbjct 59790 ATTTTCCATTGAAAATTATAAACTGGGCCTAAGTC-CCCTTCTTCTCTGTTGCAGAATAC 59732
Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGA 7032
| || |||||| | ||||| ||||| | | ||||||||| ||||| ||| ||| ||
Sbjct 59731 CGGC-TGTCCAAGAGGTCTCAGGACCCATTTGAGTCCCAGATTTTCACTCCCTTGGAAGA 59673
Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092
| ||| | ||| |||| ||| | | |||||||||| |||||| | || |||||
Sbjct 59672 CAATTCCCAAGCGTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTT 59613
Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTC 7128
| || | ||| |||| || |||||||| ||||||||
Sbjct 59612 CTAGAATACAGGTTTGGTTGTCAGCAGAGGAAATTC 59577
>seq489
Length=2104609
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679
|| ||||||||||| |||||||| | ||| || || |||||||| ||||| || | |||
Sbjct 942561 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 942620
Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739
|||||||| || | || || | |||||||||||| || || ||| | |||||||| |||
Sbjct 942621 ATGTCTCCTGACCTCTGGTACAACTGGCAGGACAGTTCACCGTTCACCACGTAGAACTGG 942680
Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780
|| || | |||||||| || || ||||||||||| |||||
Sbjct 942681 CAAAGAGCATGGCACGGAGGTAGGGCCATCAGAGGAAGATC 942721
Score = 141 bits (156), Expect = 8e-29
Identities = 128/161 (80%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624
||||| ||||||||||| || || |||||||| | || ||||| |||||||| | |||
Sbjct 942721 GATCTTCCTCTGATGGCCCTACCTCCGTGCCATGCTCTTTGCCAGTTCTACGTGGTGAAC 942662
Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684
|| || |||||||||||| | || || | || ||||||||||| | || ||||| |||
Sbjct 942661 GGTGAACTGTCCTGCCAGTTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTC 942602
Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725
||||| || || ||| | |||||||| ||||||||||| ||
Sbjct 942601 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 942561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448254112748880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |