Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09- 06] 1,479 sequences; 2,391,082,183 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq694 196 4e-45 seq489 141 8e-29 >seq694 Length=2958536 Score = 196 bits (216), Expect = 4e-45 Identities = 429/636 (67%), Gaps = 20/636 (3%) Strand=Plus/Plus Query 34217 GAATTTCCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTG 34276 |||||||| |||||||| || |||| ||| | || |||||| || | |||||| ||||| Sbjct 59577 GAATTTCCTCTGCTGACAACCAAACCTGTATTCTAGAAGGGTGTTTTGGAGGAGTTGCTG 59636 Query 34277 TGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGG 34336 ||||| | | ||| |||| ||| | ||| | || ||| ||| ||||| |||||| Sbjct 59637 TGGTTTATCAAGGGATCCACAAACGCTTGGGAATTGTCTTCCAAGGGAGTGAAAATCTGG 59696 Query 34337 GACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCC-CATCTCGGGAGGAGGG 34395 ||| | | ||||| ||||| | |||||| || || ||| || | | || |||| Sbjct 59697 GACTCAAATGGGTCCTGAGACCTCTTGGACA-GCCGGTATTCTGCAACAGAGAAGAAGGG 59755 Query 34396 CGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAG 34455 ||||| ||||| || || || || |||| | | || || | Sbjct 59756 -GACTTAGGCCCAGTTTATAATTTTCAATGGAAAATA-------CAAAG-ATAAGA---- 59802 Query 34456 CGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAA 34515 | | || ||||| || || |||| ||||| ||||| | ||||| ||||| | || Sbjct 59803 --ATTCAGATTATTCTGGTCAAGGAGTAGACCAACTGCAAAAGGTGATTGACACAATCAA 59860 Query 34516 GCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCT 34575 ||| |||||||||||| ||| | |||| | |||||| || || ||||| ||| | Sbjct 59861 AACCAACTGTGATGACAGAAGAATCATCCTGTGTGGGTGGAATCCAAAAGATCTTCCTTT 59920 Query 34576 GATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTC 34635 ||||| ||| | | ||||| |||| ||||| |||||| | | ||||| |||||||| Sbjct 59921 AATGGC--TCCTCTC-TGCCATTCCCTTTGCCAGTTCTACCTGGAAAATGGTGAGCTGTC 59977 Query 34636 CTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAG 34695 ||||||||| || | | || ||||||||||| | | ||||| | ||| | | || Sbjct 59978 CTGCCAGCTATACCGGAGCTCAGGAGACATGGGCCTGGTTGTGCCCTCCAATGTCACCAG 60037 Query 34696 TTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCTGGT 34755 || || |||||||| |||| ||| | || | || || || | || | | Sbjct 60038 CTATGCCCTGCTCACCTACAGGATGGTACACACCACAGGCCTGAAGCCCAGTGACTTCAT 60097 Query 34756 GCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGAGCGGCTCCGGATCCAGCT 34815 ||||| ||||| ||||| ||||| ||||||| || | |||| ||| || ||||| Sbjct 60098 ACATACTTTGGGAGATGCACATATTTACCTGAGTCATGTTGAGCTGCTGAAAATGCAGCT 60157 Query 34816 GCAACGAGAGCCCCGACCGTTCCCCCAGCTCAAAAT 34851 || |||| || | || ||||| |||| || || Sbjct 60158 TCAGTGAGAACCAAGGCCTTTCCCGAAGCTTAAGAT 60193 Score = 196 bits (216), Expect = 4e-45 Identities = 429/636 (67%), Gaps = 20/636 (3%) Strand=Plus/Minus Query 6494 ATTTTGAGCTGGGGGAACGGTCGGGGCTCTCGTTGCAGCTGGATCCGGAGCCGCTCGATG 6553 || || |||| ||||| || | || |||| || ||||| || ||| |||| | Sbjct 60193 ATCTTAAGCTTCGGGAAAGGCCTTGGTTCTCACTGAAGCTGCATTTTCAGCAGCTCAACA 60134 Query 6554 TGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCCC 6613 || ||||||| ||||| ||||| ||||| ||||| | | || | || || || Sbjct 60133 TGACTCAGGTAAATATGTGCATCTCCCAAAGTATGTATGAAGTCACTGGGCTTCAGGCCT 60074 Query 6614 ACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCT 6673 | || | ||| |||| |||||||| || || || | | ||| | ||||| | Sbjct 60073 GTGGTGTGTACCATCCTGTAGGTGAGCAGGGCATAGCTGGTGACATTGGAGGGCACAACC 60014 Query 6674 AACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAG 6733 | ||||||||||| || | | || ||||||||||||||||| ||||| | | |||| Sbjct 60013 AGGCCCATGTCTCCTGAGCTCCGGTATAGCTGGCAGGACAGCTCACCATTTTCCAGGTAG 59954 Query 6734 AATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCAC 6793 || ||||| |||| ||||| | | ||| ||||| | ||| ||||| || || |||||| Sbjct 59953 AACTGGCAAAGGGAATGGCA-GAGAGGA--GCCATTAAAGGAAGATCTTTTGGATTCCAC 59897 Query 6794 GCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGC 6853 | |||| | ||| |||||||||||| ||| || | ||||| ||||| | ||| Sbjct 59896 CCACACAGGATGATTCTTCTGTCATCACAGTTGGTTTTGATTGTGTCAATCACCTTTTGC 59837 Query 6854 AGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAG 6913 || ||||| |||| || || ||||| || | | | || || | Sbjct 59836 AGTTGGTCTACTCCTTGACCAGAATAATCTGAAT------TCTTAT-CTTTG-------T 59791 Query 6914 TGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATG-GGAACCC 6972 | |||| || || || || ||||| ||||| |||| || | | || ||| | Sbjct 59790 ATTTTCCATTGAAAATTATAAACTGGGCCTAAGTC-CCCTTCTTCTCTGTTGCAGAATAC 59732 Query 6973 CCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGA 7032 | || |||||| | ||||| ||||| | | ||||||||| ||||| ||| ||| || Sbjct 59731 CGGC-TGTCCAAGAGGTCTCAGGACCCATTTGAGTCCCAGATTTTCACTCCCTTGGAAGA 59673 Query 7033 GAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTT 7092 | ||| | ||| |||| ||| | | |||||||||| |||||| | || ||||| Sbjct 59672 CAATTCCCAAGCGTTTGTGGATCCCTTGATAAACCACAGCAACTCCTCCAAAACACCCTT 59613 Query 7093 CCAGTACACACGTTTCGTCGTCAGCAGCGGAAATTC 7128 | || | ||| |||| || |||||||| |||||||| Sbjct 59612 CTAGAATACAGGTTTGGTTGTCAGCAGAGGAAATTC 59577 >seq489 Length=2104609 Score = 141 bits (156), Expect = 8e-29 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || ||||||||||| |||||||| | ||| || || |||||||| ||||| || | ||| Sbjct 942561 TGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGCACACCCAGGCCC 942620 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 |||||||| || | || || | |||||||||||| || || ||| | |||||||| ||| Sbjct 942621 ATGTCTCCTGACCTCTGGTACAACTGGCAGGACAGTTCACCGTTCACCACGTAGAACTGG 942680 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATC 6780 || || | |||||||| || || ||||||||||| ||||| Sbjct 942681 CAAAGAGCATGGCACGGAGGTAGGGCCATCAGAGGAAGATC 942721 Score = 141 bits (156), Expect = 8e-29 Identities = 128/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 34565 GATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAAT 34624 ||||| ||||||||||| || || |||||||| | || ||||| |||||||| | ||| Sbjct 942721 GATCTTCCTCTGATGGCCCTACCTCCGTGCCATGCTCTTTGCCAGTTCTACGTGGTGAAC 942662 Query 34625 GGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTC 34684 || || |||||||||||| | || || | || ||||||||||| | || ||||| ||| Sbjct 942661 GGTGAACTGTCCTGCCAGTTGTACCAGAGGTCAGGAGACATGGGCCTGGGTGTGCCCTTC 942602 Query 34685 AACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 ||||| || || ||| | |||||||| ||||||||||| || Sbjct 942601 AACATCGCCAGCTACTCCCTGCTCACCTACATGATCGCACA 942561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448254112748880