Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq489 163 2e-35
seq1033 95.1 1e-14
seq550 87.8 1e-12
>seq489
Length=2104609
Score = 163 bits (180), Expect = 2e-35
Identities = 135/165 (82%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773
|| || |||| ||| || |||||||| ||||| || ||||||||||||||||| ||||||
Sbjct 942549 AGGCCTGTGATGTGTGCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGC 942608
Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833
|| || || |||||||| |||||||||||||| | |||||| || || || |||| |
Sbjct 942609 ACACCCAGGCCCATGTCTCCTGACCTCTGGTACAACTGGCAGGACAGTTCACCGTTCACC 942668
Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCATGAGA 29878
||||| ||||| || | |||||||||||||| |||||||| |||
Sbjct 942669 ACGTAGAACTGGCAAAGAGCATGGCACGGAGGTAGGGCCATCAGA 942713
>seq1033
Length=8840225
Score = 95.1 bits (104), Expect = 1e-14
Identities = 162/232 (70%), Gaps = 10/232 (4%)
Strand=Plus/Minus
Query 114290 TCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGAG 114349
|| || ||||| |||| || | ||||| | | |||| |||||| | ||| || |||
Sbjct 4779287 TCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTTGATTCTTCTTGGGAATAGAG 4779228
Query 114350 AACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCTCTGTCGGAAGACGTAGCG 114409
||||| ||||| |||||||| ||||||| ||||| ||||||| | || || || | |
Sbjct 4779227 AACCATGTCTTCCTACCCATAATCACCAAATTCTGTTTACCTCCTACTGATGAGGTTGTG 4779168
Query 114410 GTCAAGGCTCGAAAGTGTTTAAAATCTTTGCAAAGTCTCACCGGATGCCACGGCAGATCT 114469
|||| | | || | || || || || | || ||| |||| ||||| ||
Sbjct 4779167 GTCATTCTTTGGAAATACTTGAATTCATTCCTGAG------CGGCGGCCAGGGCAGGTCC 4779114
Query 114470 CCGTTGTTCCCGATGCCCATG-TCT-GGACACGCTGCCACGATACCGTTCAG 114519
|| || || |||||||||||| ||| |||||| || | ||||| ||| ||
Sbjct 4779113 CCATTCTTGCCGATGCCCATGTTCTGGGACACAGTG--ATGATACAGTTTAG 4779064
>seq550
Length=32697773
Score = 87.8 bits (96), Expect = 1e-12
Identities = 84/108 (78%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 114284 TTAAGCTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGG 114343
|| || || || ||||| |||| || | ||||| | | ||||| |||||| || ||
Sbjct 9736947 TTGAGGTCTCTACTGAGAACTATATTAATTCTGTCCTTTAAAGGTCGATTCTTCTCTGGA 9736888
Query 114344 ATGGAGAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391
|| |||||||| |||||||||||||| ||||||| ||||| ||||||
Sbjct 9736887 ATAGAGAACCATGTCTTTCTACCCATAATCACCAAATTCTGTTTACCT 9736840
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406155878781394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |