Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Panthera_20tigris_20altaica_20[refseq_20GCF_5F000464555.1_202013-09-
06] 1,479 sequences; 2,391,082,183 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1153 141 2e-28
seq566 114 3e-20
seq738 86.0 1e-11
>seq1153
Length=1501042
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || || ||||| ||||| || ||||||||||| || | | ||
Sbjct 1169136 CCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 1169077
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||||||| || ||| ||||| ||||| | |||||||||||| | | ||| ||
Sbjct 1169076 GCGCCCATCTTCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 1169017
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
|| ||||| || || || ||||||| |||| | | |||| ||| ||| || ||
Sbjct 1169016 CTCTTTTTCCTGGATCTTCCCTTTGACATTCTCAATGGTGTC---ACTGGGCTCCACCTC 1168960
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || |||||||| | ||||||||||||| ||||||
Sbjct 1168959 CAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1168915
Score = 141 bits (156), Expect = 2e-28
Identities = 167/225 (74%), Gaps = 6/225 (3%)
Strand=Plus/Minus
Query 151883 CCTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGT 151942
|||||| | |||||| || || ||||| ||||| || ||||||||||| || | | ||
Sbjct 1169364 CCTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 1169305
Query 151943 TCTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCC 152002
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 1169304 GCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCC 1169245
Query 152003 TTCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTC 152059
||||| || || || || ||||| |||| | | |||| ||| ||| || ||
Sbjct 1169244 CTCCTTGTCCTGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTC 1169188
Query 152060 AAGAGTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || || |||||||| || ||||||||||||| ||||||
Sbjct 1169187 CAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169143
Score = 132 bits (146), Expect = 1e-25
Identities = 159/215 (74%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || ||||| ||||| || ||||||||||| || | | || | |||||||
Sbjct 1171011 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1170952
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||||||||| ||||| | |||||||||||| | | ||| || ||||| ||
Sbjct 1170951 TCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1170892
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || |||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 1170891 TGGATCTTCGCCTTGACATTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 1170835
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| | ||||||||||||| ||||||
Sbjct 1170834 GTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 1170800
Score = 127 bits (140), Expect = 5e-24
Identities = 158/215 (73%), Gaps = 6/215 (3%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || ||||| ||||| || ||||||||||| || | | || | |||||||
Sbjct 1169582 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 1169523
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || ||| ||||| ||||| | |||||||||||| | | ||| || ||||| ||
Sbjct 1169522 TCCAGCTGTTTGCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCCTCCTTGTCC 1169463
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || ||||| |||| | | |||| ||| ||| || || || || ||
Sbjct 1169462 TGGATCTTCGCCTTGACGTTCTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 1169406
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| |||||||| || ||||||||||||| ||||||
Sbjct 1169405 GTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCAT 1169371
Score = 98.7 bits (108), Expect = 2e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
||||| | |||||| || || ||||| ||||| || ||||||||||| || | | ||
Sbjct 1170792 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 1170733
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| ||||||||| || ||||||||| ||||| | |||||||||||| | | ||| ||
Sbjct 1170732 CGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGCTGGTCAGGGGGGATGCCC 1170673
Query 152004 TCCTTTTCTTGAATTTT 152020
||||| || || || ||
Sbjct 1170672 TCCTTGTCCTGGATCTT 1170656
>seq566
Length=2972453
Score = 114 bits (126), Expect = 3e-20
Identities = 155/215 (72%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|| || ||||| ||||| |||||||| |||||||||||||| | | ||| | |||||
Sbjct 801028 AGAACCAGATGGAGAGTGGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 801087
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||||||||||||| | | ||| ||||| || ||
Sbjct 801088 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGGGGGATGCCTTCTTTATCC 801147
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || || | || | | |||| ||| ||| || || || || ||
Sbjct 801148 TGGATCTTGGCCTTCACGTTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 801204
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || ||||||||||||| ||||||
Sbjct 801205 GTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 801239
Score = 111 bits (122), Expect = 4e-19
Identities = 156/218 (72%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || || |||||||| |||||||||||||| | | ||| | |||||
Sbjct 801256 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCC 801315
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || || ||||| |||||||||||||| | | ||| || ||||| ||
Sbjct 801316 TCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCTGGGGGGATGCCCTCCTTATCC 801375
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACT---CTCTACTTCAAGAGTAATA 152069
|| || || || || | || | | |||| ||| ||| || || || || ||
Sbjct 801376 TGGATCTTGGCCTTCACGTTTTCGATGGTGTC---ACTGGGCTCCACCTCCAGGGTGATG 801432
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107
|| ||||| || || ||||||||||||| ||||||||
Sbjct 801433 GTCTTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 801470
>seq738
Length=7307337
Score = 86.0 bits (94), Expect = 1e-11
Identities = 150/216 (69%), Gaps = 3/216 (1%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || || || |||| ||| || ||||||| | | ||| | | |||
Sbjct 4320472 GAGAACCAGGTGCAGGGTTGATCCTTTCTGGGTGCTGTAATCAGAAAGAGTGCGGCTATC 4320413
Query 151952 TTCTAG--GCTTTTCCCGGCGAA-GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008
||| || ||||| || | || | | |||||||||||||| | |||| ||||| ||
Sbjct 4320412 TTCCAGCAGCTTTGCCTGCAAAAAGGTGAGCCTCTGCTGGTCAGGGCAGATCCCTTCTTT 4320353
Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068
||||| || || ||| ||| |||| | | |||| | ||| || || ||||| |
Sbjct 4320352 ATCTTGGATCTTAGCTTTCACATTCTCAATGGTGTCAGTGGGCTCCACCTCCAGAGTGAC 4320293
Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || || |||||| | || | ||||||
Sbjct 4320292 GGTCTTGCCAGTCAGGGTCTTCGCAAACATCTGCAT 4320257
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153798935456409
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