Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq847 291 1e-73
seq9470 223 4e-53
seq10366 185 1e-41
seq6415 172 6e-38
seq9639 168 8e-37
seq10734 165 1e-35
seq646 165 1e-35
seq9538 150 2e-31
seq7355 150 2e-31
seq7053 127 2e-24
>seq847
Length=2693992
Score = 291 bits (322), Expect = 1e-73
Identities = 610/898 (68%), Gaps = 17/898 (2%)
Strand=Plus/Plus
Query 9473 CCGCC-CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531
||||| ||||| || ||||| | |||| || |||||||| | | |||||| |
Sbjct 898999 CCGCCACTGTACTCCCTGGTGTTCATGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 899058
Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591
|| ||| || ||||| || | || | | || ||||| | ||| | ||||||||
Sbjct 899059 ATCCTCACAAAATACAAGAGGCTCCGTATTATGACCAACATCTACCTGCTCAACTTGGCC 899118
Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651
|| ||||| |||| || || | || ||||||| ||||| |||||| || | || |
Sbjct 899119 ATTTCTGATGTGCTCTTCCTAGTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGA- 899176
Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711
| || ||| |||||| | ||||||| ||||| || | | |||||||
Sbjct 899177 -AAGAGTGGGGTTTTGGCCACCACATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGC 899235
Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771
|||||||| || |||| | ||||||||| | || ||||| ||||||| || | |||
Sbjct 899236 TTGTACAGCGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTATCTGGCCATCGTC 899295
Query 9772 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 9829
| || || ||| || ||| | ||||| || | ||| || |||||| | | |
Sbjct 899296 CACGCCGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCGTTACCAGCATTT 899353
Query 9830 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATG-GACACCAA 9888
|||||| ||||||||| | |||||||||||||||||||||||| ||| ||||
Sbjct 899354 TCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGAC-CCAA 899412
Query 9889 GATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGG 9948
|| || ||| | | || |||| |||||||||| | ||||| |||
Sbjct 899413 GAGGAGGCTGGACTGACTATCTGCAGTCCTCTTTACCCAGAGAATAATGTAAATGCCTGG 899472
Query 9949 AGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATG 10008
| || ||| | | | ||| ||| | ||||| | ||||||||||| |||||
Sbjct 899473 AAGCAATTCCATGCTCTGAGAATGAATATCCTGGGTCTCGCTCTGCCTCTGCTCGTTATG 899532
Query 10009 GCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTAC 10068
|| ||||||| | | |||||| | | |||| |||| ||||||| | || || |||
Sbjct 899533 GCCATCTGCTATTCAGGAATTATTAAGACACTGCTGAGATGCCCCAGTAGAAAAAAATAC 899592
Query 10069 AAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTAC 10128
|| ||||| | ||||| |||||||| ||||||| || ||| |||| ||||||||||||
Sbjct 899593 AAAGCCATTCGACTCATTTTTGTCATTATGGTGGTCTTCTTTATTTTCTGGACACCCTAC 899652
Query 10129 AACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCAT 10186
|| | || ||||||| | | ||||| || | ||| ||| ||| |||
Sbjct 899653 AATCTGATTGTCCTACTCCTTGCTTTTCA---AATGCACTTGGAGACCAATTGTGAGCA- 899708
Query 10187 TGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTT 10246
|||||| | ||||| |||| ||||| | ||| | | |||||||| ||||| |
Sbjct 899709 -GAGCAGACAGCTGGACCTGGCCATGCTGGTGACAGAGGTGATTGCCTACACGCACTGCT 899767
Query 10247 GCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACT 10306
| ||||||| |||||||| || || || || |||| ||| | | ||||| |||||
Sbjct 899768 GTGTCAACCCCGTGATCTATGCCTTTGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACT 899827
Query 10307 TCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 10364
| ||||||| | |||||||||||||| |||| | ||| || || || || ||||
Sbjct 899828 TTTTCCACAGACATGTGGCCATCTACCTGGGCAAATTCATGCCGTTTCTTCCTAGTGA 899885
Score = 291 bits (322), Expect = 1e-73
Identities = 610/898 (68%), Gaps = 17/898 (2%)
Strand=Plus/Plus
Query 176359 CCGCC-CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417
||||| ||||| || ||||| | |||| || |||||||| | | |||||| |
Sbjct 898999 CCGCCACTGTACTCCCTGGTGTTCATGATTGGTCTGCTGGGCAATGTAGTGGTGGTGGTG 899058
Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477
|| ||| || ||||| || | || | | || ||||| | ||| | ||||||||
Sbjct 899059 ATCCTCACAAAATACAAGAGGCTCCGTATTATGACCAACATCTACCTGCTCAACTTGGCC 899118
Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537
|| ||||| |||| || || | || ||||||| ||||| |||||| || | || |
Sbjct 899119 ATTTCTGATGTGCTCTTCCTAGTCACGCTGCCATTCTGGATTCACTATGTTAGG-TGGA- 899176
Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597
| || ||| |||||| | ||||||| ||||| || | | |||||||
Sbjct 899177 -AAGAGTGGGGTTTTGGCCACCACATGTGTAAGTTGCTCTCTGGGCTCTATTACATGGGC 899235
Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657
|||||||| || |||| | ||||||||| | || ||||| ||||||| || | |||
Sbjct 899236 TTGTACAGCGAGATCTTCTTCATCATCCTCTTGACCATAGACCGGTATCTGGCCATCGTC 899295
Query 176658 TATGCTGTAACTGC--TTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTAT 176715
| || || ||| || ||| | ||||| || | ||| || |||||| | | |
Sbjct 899296 CACGCCGTGTTTGCCCTTCGAGCCC--GGACAGTCACTTTTGGTATCGTTACCAGCATTT 899353
Query 176716 GTACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATG-GACACCAA 176774
|||||| ||||||||| | |||||||||||||||||||||||| ||| ||||
Sbjct 899354 TCACCTGGGGCCTGGCAGGGCTAGCAGCCCTCCCTGAATTTTTCTTTCATGAGAC-CCAA 899412
Query 176775 GATGACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAGATGTCTACAAATGTTTGG 176834
|| || ||| | | || |||| |||||||||| | ||||| |||
Sbjct 899413 GAGGAGGCTGGACTGACTATCTGCAGTCCTCTTTACCCAGAGAATAATGTAAATGCCTGG 899472
Query 176835 AGGCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATG 176894
| || ||| | | | ||| ||| | ||||| | ||||||||||| |||||
Sbjct 899473 AAGCAATTCCATGCTCTGAGAATGAATATCCTGGGTCTCGCTCTGCCTCTGCTCGTTATG 899532
Query 176895 GCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTAC 176954
|| ||||||| | | |||||| | | |||| |||| ||||||| | || || |||
Sbjct 899533 GCCATCTGCTATTCAGGAATTATTAAGACACTGCTGAGATGCCCCAGTAGAAAAAAATAC 899592
Query 176955 AAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTAC 177014
|| ||||| | ||||| |||||||| ||||||| || ||| |||| ||||||||||||
Sbjct 899593 AAAGCCATTCGACTCATTTTTGTCATTATGGTGGTCTTCTTTATTTTCTGGACACCCTAC 899652
Query 177015 AACATTGTTCTCCTACTGTCTACCTTTCACGCAA--CCCTTCTTAACCTGCAGTGTGCAT 177072
|| | || ||||||| | | ||||| || | ||| ||| ||| |||
Sbjct 899653 AATCTGATTGTCCTACTCCTTGCTTTTCA---AATGCACTTGGAGACCAATTGTGAGCA- 899708
Query 177073 TGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTT 177132
|||||| | ||||| |||| ||||| | ||| | | |||||||| ||||| |
Sbjct 899709 -GAGCAGACAGCTGGACCTGGCCATGCTGGTGACAGAGGTGATTGCCTACACGCACTGCT 899767
Query 177133 GCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACT 177192
| ||||||| |||||||| || || || || |||| ||| | | ||||| |||||
Sbjct 899768 GTGTCAACCCCGTGATCTATGCCTTTGTTGGTGAGAGGTTCCGGAAGCACCTCCGCCACT 899827
Query 177193 TCTTCCACACCTACGTGGCCATCTACCTCTGCAAGTACATCCCCTTCCTGTCTGGTGA 177250
| ||||||| | |||||||||||||| |||| | ||| || || || || ||||
Sbjct 899828 TTTTCCACAGACATGTGGCCATCTACCTGGGCAAATTCATGCCGTTTCTTCCTAGTGA 899885
Score = 122 bits (134), Expect = 1e-22
Identities = 211/303 (70%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051
|||| ||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 1006900 TGCCACTGCTTGTCATGATCGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 1006959
Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108
|||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1006960 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1007019
Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 10168
|| |||| ||| | ||||||||||| || || || ||| ||||| || | | |||
Sbjct 1007020 TTCTTTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAA----TTC 1007075
Query 10169 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 10223
|| || | | |||| ||| | |||| ||||| || ||| | | ||| |
Sbjct 1007076 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1007134
Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283
|| | | || ||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct 1007135 GACCCTGGGGATGACGCACTGCTGCATCAACCCCGTCATCTACGCCTTCGTGGGGGAGAA 1007194
Query 10284 GTT 10286
|||
Sbjct 1007195 GTT 1007197
Score = 122 bits (134), Expect = 1e-22
Identities = 211/303 (70%), Gaps = 13/303 (4%)
Strand=Plus/Plus
Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937
|||| ||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 1006900 TGCCACTGCTTGTCATGATCGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 1006959
Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994
|||| ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 1006960 GCAGCGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 1007019
Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTC 177054
|| |||| ||| | ||||||||||| || || || ||| ||||| || | | |||
Sbjct 1007020 TTCTTTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAA----TTC 1007075
Query 177055 TTAACCTGCAGT--GTGCATTGAGCAGTAAC---TTGGACATGGCTCTGCTGATAACAAA 177109
|| || | | |||| ||| | |||| ||||| || ||| | | ||| |
Sbjct 1007076 TTTGGCTTGAATAACTGCAGTGA-CTCTAACAGGCTGGACCAAGCCATGCAGGTGACAGA 1007134
Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169
|| | | || ||||| ||||||||||| || |||||||| ||||||||||||||
Sbjct 1007135 GACCCTGGGGATGACGCACTGCTGCATCAACCCCGTCATCTACGCCTTCGTGGGGGAGAA 1007194
Query 177170 GTT 177172
|||
Sbjct 1007195 GTT 1007197
Score = 111 bits (122), Expect = 2e-19
Identities = 241/357 (68%), Gaps = 13/357 (4%)
Strand=Plus/Plus
Query 9992 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 10051
|||| ||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 992763 TGCCACTGCTTGTCATGATCGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 992822
Query 10052 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 10108
|| | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 992823 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 992882
Query 10109 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 10167
|| | || ||| | ||||||||||| || || || ||| ||||| || | | | ||
Sbjct 992883 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 992942
Query 10168 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 10223
|| | ||||| | | || ||||| | ||||| ||| ||| | | ||| |
Sbjct 992943 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 992997
Query 10224 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 10283
|| | | || || || ||||||||||| | |||||||| ||||||||||||||
Sbjct 992998 GACCTTGGGGATGACTCATTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 993057
Query 10284 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 10340
||| || || | || | ||||||| | || | |||| ||||||||||
Sbjct 993058 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 993114
Score = 111 bits (122), Expect = 2e-19
Identities = 241/357 (68%), Gaps = 13/357 (4%)
Strand=Plus/Plus
Query 176878 TGCCTCTGCTCATTATGGCTGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCC 176937
|||| ||||| | ||| |||||||||| | ||| || | || ||| | || | |
Sbjct 992763 TGCCACTGCTTGTCATGATCGTCTGCTACTCAGGAATCATAAAAACCCTGCTCCGGTGTC 992822
Query 176938 CCAGC---AAGAAGAAGTACAAGGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATT 176994
|| | ||||||||| ||||||| | ||||||||||| || |||||| | | ||| |
Sbjct 992823 GCAACGAGAAGAAGAAGCACAAGGCTGTGAGGCTCATCTTCGTGATCATGATTGTCTACT 992882
Query 176995 TTGTTTTTTGGACACCCTACAACATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTT- 177053
|| | || ||| | ||||||||||| || || || ||| ||||| || | | | ||
Sbjct 992883 TTCTCTTCTGGGCTCCCTACAACATCGTCCTTCTCCTGAGCACCTTCCAGGAATTCTTTG 992942
Query 177054 --CTTA--ACCTGCAGTGTGCATTGAGCAGTAACTTGGACATGGCTCTGCTGATAACAAA 177109
|| | ||||| | | || ||||| | ||||| ||| ||| | | ||| |
Sbjct 992943 GCCTGAGTACCTGTA-AGAGC----AGCAGCCAGCTGGACCAGGCCATGCAGGTGACAGA 992997
Query 177110 AACAGTAGCCTACACACACTGTTGCATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAA 177169
|| | | || || || ||||||||||| | |||||||| ||||||||||||||
Sbjct 992998 GACCTTGGGGATGACTCATTGCTGCATCAACCCCATCATCTACGCCTTCGTGGGGGAGAA 993057
Query 177170 GTTTAGAAGACACCTGTACCACTTCTTCCACACCTACGTGGCCATCTACCTCTGCAA 177226
||| || || | || | ||||||| | || | |||| ||||||||||
Sbjct 993058 GTTCAGGAGGTATCTCTCTGTGTTCTTCCGAAAGCACATTGCCAAACACCTCTGCAA 993114
>seq9470
Length=127963
Score = 223 bits (246), Expect = 4e-53
Identities = 289/396 (73%), Gaps = 5/396 (1%)
Strand=Plus/Plus
Query 145573 TGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTC 145632
|||||| ||||||| || ||||| ||| | ||||| | | ||| | | || |
Sbjct 52507 TGGTAGTCCTCCAGGGCGAAGTCTTCCAGCGTGAAGCCGAACAGGTCGGTCTTCGGCGCC 52566
Query 145633 AGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTC-CTGGTCAGCTGGAGCTTCAGGGGCTC 145691
||| || || | || |||||| |||| ||| | || ||||| |||||| ||||
Sbjct 52567 AGGGTCATGGTC---GGGAAGGGCAGGGG-CTCGCGGGAGAGCTGCAGCTTCGCCTGCTC 52622
Query 145692 CACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAG 145751
|| ||||| || |||| ||| ||||| |||||| ||| | ||| || ||||||| ||
Sbjct 52623 GACATGGTTCAGATAGAGGTGGGCGTCGCCCAGGGTGTGCACGAACTCGCCGGGCTGCAG 52682
Query 145752 GCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCAC 145811
||| ||| ||||| ||| ||||||||||| |||| ||| |||||||| |||||
Sbjct 52683 GCCGGTGGCCTGGGCCGTCATCAGGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCAC 52742
Query 145812 CCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCAC 145871
|| || || ||| ||||||||||||| ||| ||||||| || | ||| |||||||
Sbjct 52743 GCCGAGGAACAGGTCGGCCGAGCGCTGGTAAAGCAGGCAGGACAGTTTTCCGTCCGCCAC 52802
Query 145872 GTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTT 145931
| |||||||| ||||| |||||| ||||||||||||||| || | ||| ||||||||
Sbjct 52803 GAAGAACTGGAACAGGCAGTGGCACGGCGGCAGGGCCATGTCGTCGACGTCGGCCGGGTT 52862
Query 145932 CCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTT 145967
|||||| | || || | | | | ||| | ||||||
Sbjct 52863 CCAGGCCGAGACGATGTGGCGGCGGCTGTTGGGGTT 52898
>seq10366
Length=3198051
Score = 185 bits (204), Expect = 1e-41
Identities = 138/162 (85%), Gaps = 0/162 (0%)
Strand=Plus/Minus
Query 145750 AGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGC 145809
||| |||||| ||| |||| ||||||||| ||||||| ||||||||| ||||||||||||
Sbjct 2454630 AGGTCCGTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCAATGTTGAAGGGC 2454571
Query 145810 ACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCC 145869
|| ||||| |||||||| ||||| || ||||||| ||||||||| |||||||| | ||
Sbjct 2454570 ACACCCAGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCCCCATTCACC 2454511
Query 145870 ACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
|||||||||||||| ||| |||||| || || |||||||||
Sbjct 2454510 ACGTAGAACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATG 2454469
>seq6415
Length=247467
Score = 172 bits (190), Expect = 6e-38
Identities = 214/291 (74%), Gaps = 9/291 (3%)
Strand=Plus/Minus
Query 145660 GGGCTC-CTGGTCAGCTGGAGCTTCAGGGGC----TCCACGTGGTTGAGGTAGACGTGCG 145714
|||||| | ||||||||| ||| |||| || | |||||| || |||| ||| |
Sbjct 53583 GGGCTCGCGGGTCAGCTG----TTCGCGGGCCTGGTCGAGGTGGTTCAGATAGAGGTGGG 53528
Query 145715 CGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGT 145774
|||| || | | ||||| ||| || || ||||| ||||| || | |||||||||
Sbjct 53527 CGTCGCCGAAGGTGTGGACGAACTCGCCCGGCTCCAGGCCGACGACCTTGGCGACCATCA 53468
Query 145775 AGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGC 145834
||||||||||| |||| ||| |||||||| |||||||| | || ||| | ||
Sbjct 53467 GGGTCAGCAGGGCGTAGGAGGCGATGTTGAACGGCACCCCTAAGAACACGTCGGCGCTGC 53408
Query 145835 GCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAGGAGGTGGC 145894
| || || ||||||||| |||| ||| |||| ||| |||||||| ||||| |||||
Sbjct 53407 GTTGATAGAGCTGGCAGCTCAGCTTTCCGTCCGCGACGAAGAACTGGAACAGGCAGTGGC 53348
Query 145895 AGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGA 145945
||||||||||||||||| || | || || ||||||||||| |||| ||
Sbjct 53347 AGGGCGGCAGGGCCATGTCGTCGACATCGGCGGGGTTCCAGGCCGTGACGA 53297
>seq9639
Length=103419
Score = 168 bits (186), Expect = 8e-37
Identities = 210/285 (74%), Gaps = 2/285 (1%)
Strand=Plus/Plus
Query 145695 GTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGCTCGAGGC 145753
||||||| ||||| ||| ||| || | || | | |||||||| || ||| |||
Sbjct 3716 GTGGTTGTTGTAGATGTGGCAGTCGCCGCCGGTCCAG-ATGAAGTCGCCCACCTCCAGGT 3774
Query 145754 CCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCC 145813
| | ||||| | ||||| ||||||||| | ||||||||| ||||||||||| || |
Sbjct 3775 CGCATTGCTGGGCCAGCATGTGGGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGAACGC 3834
Query 145814 CCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGT 145873
|||| |||||| | ||||||||||||||||||| ||||| ||| | |||||||
Sbjct 3835 CCAGGAAGATGTCCGCGCTGCGCTGGTACAGCTGGCAGCTGAGCTTGCCGTCGGCCACGT 3894
Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCC 145933
|||||||| | | | |||||||||| || ||||| |||||||| ||| |||||
Sbjct 3895 AGAACTGGAAGAAGGCGTGGCAGGGCATGAGCGCCATCTGCGGCAGGTCGGCCACGTTCC 3954
Query 145934 AGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCT 145978
||||| ||| || || | | ||| || ||||| ||||||| ||
Sbjct 3955 AGGCGCTGACGATGATGCGGCGGCTGTCCGGGTTGCTCTTGAGCT 3999
>seq10734
Length=9239
Score = 165 bits (182), Expect = 1e-35
Identities = 214/293 (73%), Gaps = 2/293 (1%)
Strand=Plus/Minus
Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTC-CCCGGGC 145746
|||| | |||||| || | |||||| || ||||| ||| | |||||| ||| ||
Sbjct 1865 GCTCGAAGTGGTTCGAATACAGGTGCGCATCGCCCAGCGTGTGCACGAAGTCGCCCACGC 1806
Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806
| ||||| ||| || || ||||||| ||||||||| | ||||||||| ||||||||
Sbjct 1805 CC-AGGCCGGTGGCCTGCGCCACCATGTGGGTCAGCAGCGCGTAGCTGGCGATGTTGAAC 1747
Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866
||||| || || ||||| || ||||||||||||||||||| ||||| ||| ||
Sbjct 1746 GGCACTCCGAGGAAGATGTCGCCGCTGCGCTGGTACAGCTGGCAGCTGAGCTTGCCGTCC 1687
Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926
|||||||||||||| ||||| |||||| ||| ||| ||||| | || || ||
Sbjct 1686 ACCACGTAGAACTGGAACAGGTTGTGGCACGGCATCAGCGCCATCTGAGAGAGCTCGCCC 1627
Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTC 145979
|||||||||| ||| || |||| | || ||||| | |||||||||
Sbjct 1626 ACGTTCCAGGCGCTGACCACCAGCCGACGCGAATCCGGGTTGCGCTTGATCTC 1574
>seq646
Length=687
Score = 165 bits (182), Expect = 1e-35
Identities = 182/241 (76%), Gaps = 6/241 (2%)
Strand=Plus/Plus
Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764
|||| ||||||||| || ||| || | ||| || ||||||| ||||| |||| ||
Sbjct 203 TAGAGGTGCGCGTCACCGAGGGTATGCACGAACTCGCCGGGCTTCAGGCCAGTGACCTGC 262
Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824
|||||||| ||||||||||| ||| || |||||||||||||| || || ||
Sbjct 263 GCGACCATCATGGTCAGCAGGGCATAGGACGCGATGTTGAAGGGCACGCCGAGGAACACA 322
Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC---GCCACGTAGAACTGG 145881
||| ||||||||||||| ||||||||||| || || |||| || |||||||||||
Sbjct 323 TCCGCCGAGCGCTGGTAGAGCTGGCAGGACAG---CCGGCCCTTGGCGACGTAGAACTGA 379
Query 145882 CACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTG 145941
||||| ||| ||||||||||| ||||| | | || ||||| ||||||||||||
Sbjct 380 AACAGGCAGTGACAGGGCGGCAGCGCCATCTTGTCGACATCGGCCGGATTCCAGGCGGTG 439
Query 145942 A 145942
|
Sbjct 440 A 440
>seq9538
Length=646221
Score = 150 bits (166), Expect = 2e-31
Identities = 187/256 (73%), Gaps = 0/256 (0%)
Strand=Plus/Minus
Query 145696 TGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCC 145755
|||||| |||| ||||||||| ||||| ||| | ||| || ||||| | || |||
Sbjct 487078 TGGTTGGAATAGATGTGCGCGTCACCCAGCGTGTGCACGAAATCGCCGGGTTTCAGCCCC 487019
Query 145756 GTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCC 145815
|| | || || ||||| ||| ||||| | ||| || |||||||| ||||| ||
Sbjct 487018 GTCACCTGCGCCACCATCATGGTGAGCAGCGCATAGGAAGCGATGTTGAACGGCACGCCG 486959
Query 145816 AGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAG 145875
|| |||||| | || |||||||| |||||||| || ||| ||| ||| ||||||
Sbjct 486958 AGAAAGATGTCCGCGGAACGCTGGTAGAGCTGGCATGACAGCCGTCCGTCCGAAACGTAG 486899
Query 145876 AACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAG 145935
|||||| ||||| ||||||||||||||| ||||| || || || ||||| |||||
Sbjct 486898 AACTGGAACAGGCAGTGGCAGGGCGGCAGCGCCATTGCCTCCACCTCGGCCGGATTCCAT 486839
Query 145936 GCGGTGAGGACGAGCC 145951
|| | || || ||||
Sbjct 486838 GCCGAGACGATCAGCC 486823
>seq7355
Length=5246521
Score = 150 bits (166), Expect = 2e-31
Identities = 128/157 (82%), Gaps = 3/157 (2%)
Strand=Plus/Minus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| ||||| || || |||||| || ||||| |||||||| |||||||| | |||
Sbjct 5156621 CAGCGCCGCAGCCGCAGCCGGAGGGTCTTCAGCTTCTCCCCCAGCGAGTTCACGTGCTCC 5156562
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| ||| | | |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 5156561 TTGAT---GTCAGGCCCATGGTTCTCAGCCTGTGGCATCACCTCCTCCAGGTAAAACTGG 5156505
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCT 138238
||||| || |||| ||| ||||| |||||||||||||
Sbjct 5156504 ATCATTTCCGACAAGGCTTGGCAACCCAGGTAACCCT 5156468
Score = 104 bits (114), Expect = 3e-17
Identities = 80/95 (84%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 137922 TCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACTC 137981
|| |||| |||||| || |||||||||| ||||||||||| |||||||||||||||||
Sbjct 5158879 TCTGTTTCACATCTTCGTTGTCATGTAGGATTCTATGTAGTTGATGAAGATGTCAAACTC 5158820
Query 137982 GCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
|||||||| |||||||| || | || |||||||
Sbjct 5158819 ACTCATGGCTTTGTAGACACCCCTCTCTTGGAGCT 5158785
>seq7053
Length=464797
Score = 127 bits (140), Expect = 2e-24
Identities = 168/233 (72%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764
|||| |||||||| ||||| || | ||| || || |||| |||||||||| ||
Sbjct 70272 TAGATATGCGCGTCACCCAGCGTATGAACGAAATCACCCGGCTTCAGGCCCGTGACCTGC 70331
Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824
|| ||||| |||||||| | ||| ||| |||||||| ||||| || || ||
Sbjct 70332 GCCACCATCAGTGTCAGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCGAGGAAGATA 70391
Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCAC 145884
|| | |||||||| || ||||||||||| |||| || | | || ||||||||| ||
Sbjct 70392 TCGGCAGAGCGCTGATAGAGCTGGCAGGACAGCTTTCCATCGGAAACATAGAACTGGAAC 70451
Query 145885 AGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGC 145937
||| ||| |||||||||| ||||| || || |||||||||||| ||
Sbjct 70452 AGGCAGTGACAGGGCGGCAACGCCATTTCGTCCACCAGCGCCGGGTTCCACGC 70504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589965725418360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |