Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq8995 302 5e-77 seq899 161 1e-34 seq6889 131 2e-25 seq9853 127 2e-24 seq12661 122 9e-23 seq3764 87.8 2e-12 seq504 86.0 6e-12 >seq8995 Length=8301158 Score = 302 bits (334), Expect = 5e-77 Identities = 553/802 (69%), Gaps = 6/802 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 || || || ||| | || ||||| ||||| || || || || || || |||||| || Sbjct 6972278 GAACCACTTCTGAGAGAAAACCCACGCCGCTTTGTCATCTTTCCTATCGAATACCATGAT 6972219 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| ||||| || || || ||||| || || ||||| | |||||||||||||| Sbjct 6972218 ATTTGGCAGATGTATAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAGGAGGTGGACCTT 6972159 Query 116696 TCCAAGGACA-CGAGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 |||||||||| ||| ||||||| | |||| | ||| | |||| || || Sbjct 6972158 TCCAAGGACATTCAGC-ACTGGGAAGCCCTGAAGCCTGAGGAGAGATATTTTATTTCCCA 6972100 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGC-GTT 116813 |||||||| || || || || || || ||||| || || || || |||| |||| ||| Sbjct 6972099 TGTGCTGGCTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCGGTT 6972040 Query 116814 TCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | || || || || ||| | ||||||| | || ||||| ||||| || || ||||||| Sbjct 6972039 TAGC-CAAGAAGTTCAGATTACCGAGGCTCCTTGTTTCTATGGCTTCCAAATTGCCATGG 6971981 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGG 116933 | ||| | || || ||||||||| |||||| ||||| ||| | ||| | | Sbjct 6971980 AAAACATACATTCTGAAATGTATAGTCTCCTCATTGACACTTACATTAAAGATTCCAAAG 6971921 Query 116934 AGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGT 116993 | | | | | || || ||||| ||||||||||| || || || ||||||| || | Sbjct 6971920 AAAGGGAATTTCTCTTCAATGCCATTGAGACGATGCCTTGTGTGAAGAAGAAGGCAGATT 6971861 Query 116994 GGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCG 117053 |||| ||||||||| | | || ||| || | | || || || |||| ||||| | Sbjct 6971860 GGGCCTTGCGCTGGACTGGGGACAAAGAAGCTACATATGGAGAACGTGTGGTAGCCTTTG 6971801 Query 117054 CGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAAC 117113 | || || || ||| |||||||||| || ||| || | ||||| ||||||||||||| Sbjct 6971800 CTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCGTCTATATTCTGGCTCAAGAAAC 6971741 Query 117114 GCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGC 117173 | || || ||||| ||||| || || ||| || || || ||| || |||||| ||| Sbjct 6971740 GAGGACTGATGCCTGGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATGAGGGTTTGC 6971681 Query 117174 ATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC-GCGC 117232 | || |||||| |||| || ||||||| || || |||| | | | || | | | Sbjct 6971680 ACTGTGACTTTACCTGCCTGATGTTCAAACACCTGTTGCA-CAAACCTTCGAAACAGAGA 6971622 Query 117233 GTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTG 117292 || | ||| || || | | || || || || ||| ||||| || || || ||| Sbjct 6971621 GTAAAGGAAATAATCGTCAATGCAGTTAGGATAGAACAGGAGTTCCTTACGGAGGCCCTG 6971562 Query 117293 CCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCC 117352 || ||| || | || | |||||| |||| ||| |||||||||||||| || Sbjct 6971561 CCTGTGAAGCTCATTGGGATGAATTGCACTTTGATGAAGCAGTACATCGAGTTCGTGGCA 6971502 Query 117353 GACAGGCTGCTGCTCGAGCTGG 117374 || || || |||| ||||||| Sbjct 6971501 GATAGACTTATGCTGGAGCTGG 6971480 Score = 170 bits (188), Expect = 2e-37 Identities = 296/428 (69%), Gaps = 2/428 (0%) Strand=Plus/Minus Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || || ||||| ||||||||||| || || || ||||||| || ||||| |||||||| Sbjct 6969038 TTCAATGCCATTGAGACGATGCCTTGTGTGAAGAAGAAGGCAGATTGGGCCTTGCGCTGG 6968979 Query 117008 ATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGC 117067 | | | || ||| || | | || || || |||| ||||| || || || || ||| Sbjct 6968978 ACTGGGGACAAAGAAGCTACATATGGAGAACGTGTGGTAGCCTTTGCTGCAGTGGAAGGC 6968919 Query 117068 GTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCC 117127 |||||||||| || ||| || | ||||| |||||||||||||| || || ||||| Sbjct 6968918 ATCTTCTTTTCCGGTTCTTTTGCGTCTATATTCTGGCTCAAGAAACGAGGACTGATGCCT 6968859 Query 117128 GGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCC 117187 ||||| || || ||| || || || ||| || |||||| |||| || |||||| || Sbjct 6968858 GGCCTCACGTTTTCCAATGAACTTATTAGCAGAGATGAGGGTTTGCACTGTGACTTTACC 6968799 Query 117188 TGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGC-GCGCGTCAGGGAGATCGT 117246 || || ||||||| || || |||| | | | || | | | || | ||| || | Sbjct 6968798 TGCCTGATGTTCAAACACCTGTTGCA-CAAACCTTCGAAACAGAGAGTAAAGGAAATAAT 6968740 Query 117247 CACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCT 117306 | | | || || || || ||| ||||| || || || ||||| ||| || | Sbjct 6968739 CGTCAATGCAGTTAGGATAGAACAGGAGTTCCTTACGGAGGCCCTGCCTGTGAAGCTCAT 6968680 Query 117307 GGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCT 117366 || | |||||| |||| ||| |||||||||||||| || || || || |||| Sbjct 6968679 TGGGATGAATTGCACTTTGATGAAGCAGTACATCGAGTTCGTGGCAGATAGACTTATGCT 6968620 Query 117367 CGAGCTGG 117374 ||||||| Sbjct 6968619 GGAGCTGG 6968612 >seq899 Length=2520420 Score = 161 bits (178), Expect = 1e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 2264628 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2264569 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 2264568 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 2264510 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | ||||||||| |||||||| Sbjct 2264509 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2264450 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| | || ||||||||||||| || Sbjct 2264449 CATCCAGAAAGAGTCCACTCTGCACTTGGTCCTGCGCTTGAGGGGAGG 2264402 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 2264856 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2264797 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 2264796 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 2264738 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | ||||||||| |||||||| Sbjct 2264737 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2264678 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || | ||| | || || || Sbjct 2264677 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 2264630 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 2265084 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCCTGGAGGTGGAGCCCAGT 2265025 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 2265024 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 2264966 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | ||||||||| |||||||| Sbjct 2264965 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2264906 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || | ||| | || || || Sbjct 2264905 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 2264858 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| ||||||||| | || || || ||| Sbjct 2265312 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACCTTGGAGGTGGAGCCCAGT 2265253 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | |||||||||||||||||| | ||||| Sbjct 2265252 GACACCATCGAGAACG-TCAAGGCCAAGATCCAAGACAAAGAGGGCATCCCCCCAGACCA 2265194 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| || || ||||||||||| || | |||||||| |||||||| Sbjct 2265193 GCAGAGGCTGATCTTTGCCGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAA 2265134 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || | ||| | || || || Sbjct 2265133 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 2265086 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || ||||| || ||||| || |||||||| || | || || || | | Sbjct 2265541 AATGCAGATCTTTGTAAAGACCCTCACTGGTAAAACCATTACTCTGGAGGTGGAGCCAAG 2265482 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | |||||| || || | || ||||| ||||||||| | ||||| Sbjct 2265481 TGACACCATCGAGAATGTCAAGGTGAAGATACAAGAAAAAGAAGGCATCCCCCCAGACCA 2265422 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | |||| || || ||||||||||| || | ||||||||| |||||||| Sbjct 2265421 ACAGAGGTTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 2265362 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| |||| ||||| || || | ||| | || || || Sbjct 2265361 CATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGAGGTGG 2265314 >seq6889 Length=11136585 Score = 131 bits (144), Expect = 2e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 ||||||||||| ||||| ||||| || || ||||| ||||||||| | || || || || Sbjct 1034466 AAAATGCAAATCTTCGTGAAAACCCTGACCGGCAAGACCATCACCCTGGAGGTGGAGCCC 1034407 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | |||| | | | | | |||| || || | || || || ||||| ||| | ||| Sbjct 1034406 AGTGACACCATCGAGAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGAC 1034347 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 ||||| | ||||||| || ||||| |||||||| || | ||||| || || ||| Sbjct 1034346 CAGCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGATTAC 1034287 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||||| | || ||||| || || | || ||||||| || Sbjct 1034286 AACATCCAGAAGGAGTCGACCCTGCACCTGGTTCTCCGTCTGAGGGGTGG 1034237 Score = 111 bits (122), Expect = 2e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || || ||||| ||||||||| | || || || ||| Sbjct 1034235 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTAGAGCCCAGT 1034176 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || || | || || || ||||| ||| | ||||| Sbjct 1034175 GACACCATCGAGAACG-TGAAGGCCAAGATCCAGGATAAGGAAGGCATTCCCCCTGACCA 1034117 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | ||||||| || ||||| |||||||| || ||||| || || ||||| Sbjct 1034116 GCAGAGGCTCATCTTTGCCGGCAAGCAGCTGGAAGATTGCCGCACTCTTTCTGATTACAA 1034057 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||| ||| | || ||||| || || | || ||||||| || Sbjct 1034056 CATCCAGAAAGAGTCGACCCTGCACCTGGTAGTCCGTCTGAGGGGTGG 1034009 >seq9853 Length=4041771 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||||| | |||||| |||||||| | || ||||| ||| Sbjct 360009 ATGCAGATCTTTGTGAAGACGCTGATGGGCAAGACCATCACTCTTGAGGTCGAGCCCAGT 359950 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | ||| |||| | ||||| | ||| | ||||||||||| | |||||| Sbjct 359949 GACACCATTGAAAGTGTCAAAGCCAAAATCCAAGACGAGGAGGGCATCCCACCAGACCAG 359890 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| | | |||||||||||| | || | ||||| || |||||||| Sbjct 359889 CAGCGTCTGATCTTCTCCGGCAAACAGCTGCAGGATGGCCGCACTCTGTCAGACTACAAT 359830 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| ||| ||||| || ||| | || || | |||||| Sbjct 359829 ATCCAGAAAGAGTTCACCCTGCACCTGGTGCTTCGTCTGCGAGGCGGC 359782 >seq12661 Length=3984070 Score = 122 bits (134), Expect = 9e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || |||||||| ||||||||| | || ||||| ||| Sbjct 2676455 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAGT 2676514 Query 40750 GACAGCG-TGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| || || | |||| | ||||| | ||||| ||||||||||| | ||||| Sbjct 2676515 GACACTACTGAGAATG-TCAAAGCCAAAATCCAAGACAAGGAGGGCATCCCACCTGACCA 2676573 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| | || |||| ||||||||||||||||| || | | ||| | |||||||| Sbjct 2676574 GCAGTGTCTGATCTTTGCGGGCAAACAGCTGGAGGATGGCCTCACTTTGTCAGACTACAA 2676633 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||| ||| |||| ||||| || ||| | || || |||||| Sbjct 2676634 TATCCAGAAAGAGTCCACCCTGCACCTGGTGCTTCGTCTGCAAGGCGGC 2676682 >seq3764 Length=1885950 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/212 (70%), Gaps = 2/212 (1%) Strand=Plus/Plus Query 40692 GCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGA 40751 ||| || ||||| || || || | ||| || |||||||| | || ||||| || | || Sbjct 1780094 GCAGATTTTCGTGAAGACCCTGAGGGGGAAGACCATCACTCTTGAGGTCGAGCCCTCGGA 1780153 Query 40752 CAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGC 40810 | | | ||| | | |||| || || | || || || || || || | ||||||| Sbjct 1780154 TACAATAGGAAATG-TAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGACCAGC 1780212 Query 40811 AACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 40870 || |||| |||| | ||||| || ||||| || | || || | |||||||||| Sbjct 1780213 AAAGACTGATCTTTGTTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACA 1780272 Query 40871 TCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 | || |||||| |||| || |||||||||||| Sbjct 1780273 TTCAAAAGGAGTCCACTCTTCATCTAGTGTTG 1780304 >seq504 Length=1076656 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/218 (70%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || || || || || |||||||| | |||||||| || Sbjct 268275 AAGATGCAGATTTTCGTGAAGACCCTGACAGGGAAGACCATCACTCTTGACGTCGAGCCC 268334 Query 40747 ACCGA--CAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGG 40804 | || || | | ||||| | ||| || || | || || || || || || | | Sbjct 268335 TCGGATACAACA-GAAAACG-TAAAGCCCAAGATCCAGGATAAGGAAGGAATTCCTCCTG 268392 Query 40805 ACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 40864 |||||||| |||| |||| || ||||| || ||||| || | | || | |||| Sbjct 268393 ACCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACT 268452 Query 40865 ACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 ||||||| || |||||| ||| || | |||||||||| Sbjct 268453 ACAACATTCAAAAGGAGTTCACTCTTCGTCTAGTGTTG 268490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515122216425840