Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq14023 91.5 3e-13
>seq14023
Length=4856233
Score = 91.5 bits (100), Expect = 3e-13
Identities = 101/132 (77%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||| || |||||||| ||||||||| | || |||||
Sbjct 1734391 GCATTTTTTGGAGCCCAGATGAATTCCTTCATCCATGTGATTATGTACTCATACTATGGG 1734332
Query 52117 ATGGCCGCTTGTGGTCC-TATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175
| || || | || || | |||||||| ||||| |||||||| || || || || ||
Sbjct 1734331 TTAGCTGCCTTCGGCCCGTGGATTCAGAAA-TATCTCTGGTGGAAGCGATACCTGACCAT 1734273
Query 52176 AATGCAGTTGGT 52187
||||| ||||
Sbjct 1734272 GCTGCAGCTGGT 1734261
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923023019742360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |