Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq11174 84.2 2e-12 >seq11174 Length=1283 Score = 84.2 bits (92), Expect = 2e-12 Identities = 91/120 (76%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 14556 AAAGGATTTGGCTTTATCACTTCAGAAGAAGGCA---AAGATTTGTTCGCTCACTTCTCA 14612 ||||| ||||||||||||||| | || || ||| ||||| ||||||||||||| || Sbjct 154 AAAGGCTTTGGCTTTATCACTCCGGATGACGGCGGCGAAGATCTGTTCGCTCACTTTTCC 95 Query 14613 GCAATCCAATCTGATGGATTCAAATCACTTGATGAAGGTCAAAAAGTTGAATTTGATGTT 14672 |||||||| | || ||||| | || | |||||||||||||| | ||||| ||| Sbjct 94 GCAATCCAGATGAACGGCTTCAAGACCCTGAAAGAAGGTCAAAAAGTCCAGTTTGACGTT 35 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48445963135014