Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq7272 432 8e-117
seq13794 80.6 6e-11
>seq7272
Length=98981
Score = 432 bits (478), Expect = 8e-117
Identities = 897/1315 (68%), Gaps = 59/1315 (4%)
Strand=Plus/Minus
Query 17048 ATCATCGGCCTGGTAGCCACCG--CCGAAGACGCCGACGCCACCGCCTTTCCACTCGATA 17105
|||||||||||||| ||||||| || | | ||||||||| ||||| ||||||||||
Sbjct 25864 ATCATCGGCCTGGTGGCCACCGGCCCCACG--GCCGACGCCGAGGCCTTCCCACTCGATA 25807
Query 17106 CGCCGGTACTCATCACCAACGTGCAGGCTGCCATCGGCAAGGCGGGCACCAGCGGTACGC 17165
| ||||| ||| |||||||| | || || | | |||||||||||||| || ||||
Sbjct 25806 CCCCGGTCCTCTTCACCAACATCGAGAAAGCGCTGGACAAGGCGGGCACCACGGGCACGC 25747
Query 17166 TGCCCGCAAGCCTGCAAGCA-ATCGCCGACCAGGCCAACGCCGCCACTGTGGTGGTGCGG 17224
|||||| | |||| |||| ||| |||||| || | ||| || | |||||
Sbjct 25746 TGCCCG-AGGCCTTGAAGCTCATCAAGGACCAGTCCCGCCCCGTGCTGGTCATCGTGCGT 25688
Query 17225 GTGAAGCCGGGCG-AGGATGAAGCCGCGACCAATAGCGCGGTC------ATCGGC----- 17272
||| ||||| ||| || | ||| || | || || | | | ||
Sbjct 25687 GTGCCCGTGGGCGCAGGCCAAACACCCGAAGAA-ATCGAGGCCGACCAGACCAGCCTGGT 25629
Query 17273 ----GGCGTCAGCGCCGATGGCAAGTACACCGGCATGAAGGCCTTGCTTGCCGCCAAGGC 17328
|||| || || | |||||| | ||||||| |||| || | |||| ||
Sbjct 25628 GGTTGGCGACAACGTGGCCGGCAAGCGCTCCGGCATTCAGGCGCTGATCACCGCGCAGCA 25569
Query 17329 CCGCTTGGGCGTGGTACCGCGCATCCTCGGCGTGCCGGGCCTGGATACCCAGCCGGTCGC 17388
| |||||||| ||| |||||||| |||| || || ||||| ||| |||| || ||
Sbjct 25568 GCAGCTGGGCGTGAAACCCCGCATCCTGGGCGCCCCCGGGCTGGACACCAAGCCCGTGGC 25509
Query 17389 TACCGCACTCATCGCCATCGCCCAGCAACTGCGCGCCTTCGCTTATGT-CTCCGCCAGCG 17447
|| |||| ||| |||| || ||||||||| | || || || | | || ||
Sbjct 25508 GGATGCCCTCACGGCCGCCGCCATCCAGCTGCGCGCCATGGCCTACGTGCAGGGGCA-CG 25450
Query 17448 GCTGCAAGACAAAGGAAG--AGGCCACCGCCTACCGCGAGAACTTCGCCGCGCGCGAAGC 17505
|| | ||| | | || ||||| || || | || |||| ||| |||||| |
Sbjct 25449 GCGCC--GACGATGTGAGCGAGGCCCTGGCGTATGCAGGGAGTTTCGGCGCCCGCGAAAC 25392
Query 17506 CATGGTGATCTGGCCGGACTTCCTGACGTGGAGCACCGTGGTCAACCAGACCGTGCCTGC 17565
||||||||||||||| || ||| | |||| |||| || ||| || || | |||
Sbjct 25391 CATGGTGATCTGGCCCGATTTCAAAGCCTGGAACACCACGGCAAACAAGGCCATCAATGC 25332
Query 17566 GCCAGCTGTTGCCCAGGCACTGGGCTTGCGTGCCCGGATCGATCAGGAGGTCGGTTGGCA 17625
||| ||||| ||| | || |||| |||| ||||| ||||| |||| ||||||||
Sbjct 25331 GCCGGCTGTGGCCTACGCGATGGGGCTGCGCGCCCGCATCGACGTGGAGCAAGGTTGGCA 25272
Query 17626 CAAGACCCTGTCGAACGTCGCCG-TCAACGGCGTGACCGGCATCAGCGCCGACGTGTTCT 17684
|||||||||||| ||||| |||| | || ||| | ||||||||| |||||| |
Sbjct 25271 CAAGACCCTGTCAAACGT-GCCGCTAAATGGCCCGGTGGGCATCAGCAAGGACGTGCATT 25213
Query 17685 GGGACCTGCAGAGCCCCAGCACCGACGCCAACTACCTCAACGAGAACGAGGTCACCACCC 17744
|||||||| ||| | || ||||| ||| ||||| ||| | | |||||||| |
Sbjct 25212 TCGACCTGCAAAGCTCGGAGACGGACGCAAACCTGCTCAATGAGGGCAACGTCACCACGC 25153
Query 17745 TGGTGCAGGAAGGGGGATTCCGTTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGT 17804
| | | | ||| | || |||||||| ||||||||||||||| || ||||
Sbjct 25152 TCATCAACTACCAGGGCTATCGCTTCTGGGGATCGCGCACCTGCAGCACCGACGAACTGT 25093
Query 17805 TCGCCTTCGAGAACTACACCCGCACCGCCCAGGTGCTGGCCGACACTATCGCCGAAGCGC 17864
|| |||||| | | ||||| |||||||||||||||||||| || || || |
Sbjct 25092 TCCGATTCGAGTCCAGCGTGCGCACTGCCCAGGTGCTGGCCGACACCATGGCAGA--GGG 25035
Query 17865 ACATGTGGGC--GGTTGACAAGCCCATGCACCCGTCACTGGTGCGCGACATCCTTGAGGG 17922
||| | | | || ||||||||||||||||| ||||| |||||| | || ||
Sbjct 25034 TCATTTCGCCTTTGTCGACAAGCCCATGCACCCCAGCATGGTGAAAGACATCGTGGAAGG 24975
Query 17923 CGTGAACGCGAAGTTCCGCGAGCTCAAGGGGCTCGGTCTGATCATCGACGCCCAGGCCTG 17982
| | || || ||||||||||| ||||||| || || ||| |||||| || |||||
Sbjct 24974 CATCAATGCCAAGTTCCGCGAACTCAAGGCCCTGGGCTACATCCTCGACGGCCGCGCCTG 24915
Query 17983 GTACGACCCCAACGTGAACGACAAGGACACGCTCAAGGCCGGCAAGCT-GCGCATCACCT 18041
|| ||| || | || ||| || || ||||||||||||||||||| | || | | ||
Sbjct 24914 GTTTGACGCCGAGGTCAACACCACAGAAGCGCTCAAGGCCGGCAAGCTGGTGCTTGA-CT 24856
Query 18042 ACGACTACACCCCGGTGCCGCCGCTCGAGGACCTGACCTTCTTCCAGAAGATCACCGACA 18101
|||||||||| || ||||||||||| || |||||| ||| |||| |||||||||
Sbjct 24855 ACGACTACACGCCCGTGCCGCCGCTGGAAGACCTGGGATTCCGCCAGCGCATCACCGACC 24796
Query 18102 GCTATCTCGTCGACTTCGCCAGCCGCGTCAACGCCTGACGCCCAGCGCTCCCCGGACGGG 18161
||||| ||| ||||||||||| ||||| | | || |||| ||||| ||
Sbjct 24795 GCTATTTCGGCGACTTCGCCATGCGCGTGGGCAC----CGGCCAG-TAAGCCCGGCCG-- 24743
Query 18162 GAGCCGACCCACCTGATTCCCGGAGAGCCCTACCATGGCCATGCCGCGCAAGCTCAAGAA 18221
| ||| | | | ||||| || ||||||| |||| ||||| ||||||||
Sbjct 24742 ----CATTCCAGCACA---CAGGAGATCCACACCATGGGACTGCCCCGCAAACTCAAGAA 24690
Query 18222 CATGAACCTCTTCAACGACGGCGGTAGCTACCAGGGCG----TCGTGAAGTCCTGCACCC 18277
| | | ||||| |||||||| | |||| ||||| | ||||| |||||
Sbjct 24689 CTTCGCCACCTTCATCGACGGCGTGAACTACATGGGCGAAATGCCCGAAGT----CACCC 24634
Query 18278 TGCCCCCGCTGGCCCGCAAGATGGAGGCCTTCCGCGGGGGCGGCATGAACGGCCC 18332
| ||| | || ||||||||||||||| | ||| | ||| |||||||| |||||
Sbjct 24633 TCCCCACCCTCACCCGCAAGATGGAGGAATACCGGGCGGGTGGCATGAATGGCCC 24579
Score = 401 bits (444), Expect = 1e-107
Identities = 967/1435 (67%), Gaps = 45/1435 (3%)
Strand=Plus/Minus
Query 2762 CCGGGAAGAACTGGCGCACCAGCTGCGCGACGCCAGAGCCCATGCCGGTGGTGTCGACGC 2821
|||||||||||| ||| | |||| |||||| ||||| || |||| || | ||
Sbjct 42082 CCGGGAAGAACTTTTTCACGATCTGCAGGACGCCCTGGCCCAGACCTGTGGAATCAATGC 42023
Query 2822 CGATGTAGGTGACCCAGTAGCGCTGGGTCACCTTGCGGATGAACTCGGCCTGTTCGGCGA 2881
||||| | || ||| || |||| || |||||||| |||||||| | | |
Sbjct 42022 AGATGTGTGCCACGTTGTATTTCTCTGTCATCTGGCGGATGACTTCGGCCTGCGCTTCAA 41963
Query 2882 AGTCCTTGCCGCGGAATTGATGGCGCTCCAGCACGCGGAACTTGCCGCCCGGTACCGCCG 2941
||||| || ||| || ||||||||||| |||||||||||||||||| | |
Sbjct 41962 AGTCCGCTCCCTTGAACTGCATGCGCTCCAGCATGCGGAACTTGCCGCCCGGCTTTTCTG 41903
Query 2942 GAGGCGCCACCACCACCAGACCCGCGGTGTCGCCCGTCTCGGCGGGGTCATAGCCCAGCC 3001
| || |||| ||| || || ||||| | ||||||||| | | |||||||||||| | ||
Sbjct 41902 GCGGGGCCAGCACTACAAGGCCCGCCGAGTCGCCCGTATGGCTGGGGTCATAGCCAATCC 41843
Query 3002 ACACCTGGCGATCACCGAACGGCCGCAGCGCGAACGGCTTGTAGTC-CTCCGACCACAGG 3060
| || | | || |||||||||| || ||| |||||| | || |||| ||
Sbjct 41842 AGACGGGCTTTTGGCCAAACGGCCGCAACGTGAAGGGCTTGAAATCGCTCCACGCA---- 41787
Query 3061 TCCCAGCTATCGACCATGCACGGCTGCAGCATGGTCAACGGGAAAATGCTCGCGCCGTCG 3120
|||||||| || | ||| || |||| ||| || |||||||| | |||
Sbjct 41786 TCCCAGCTGTCCGCATGGCAGCGCATCAGCGTGGACAGCGGGAAAACAGCGAAGGTGTCA 41727
Query 3121 TCGACGAACTGGCACATCAGCAGGTTCTGGAAAGCCTCGGCGTCGTACTCGAGACGCAGC 3180
||||| ||| |||||| |||||||| | | ||||| | ||||||| |||||
Sbjct 41726 TCGACAAACCCGCACATGAGCAGGTTGTCCCATTCCTCGTCCGAATACTCGAAGCGCAGT 41667
Query 3181 TCGTCGATGTCGAACAGATCGCAGCCACGGGCCTCGGCATCGAGGATGGTGACGATCTGG 3240
||||| | ||||||||||| |||||| | | || ||||| || | ||||| |||||
Sbjct 41666 TCGTCAAGGTCGAACAGATTGCAGCCGCCGCGCTGCGCATCCAGCACCGTGACAATCTGC 41607
Query 3241 CGCCAGATGCGGTCCTCGCACAGTCGCCCTTGCTGC-AGG-GCGTCATGACTTACGTCGA 3298
||||| || |||||||| | || | | | || ||| ||| ||| || | ||| |
Sbjct 41606 CGCCATATCTTGTCCTCGC-CGGTGAAGCCTCCAGCCAGGTGCGA-ATGGCTCAGGTCCA 41549
Query 3299 TCTTGATGCGATCGGC---GGCCGGCTTGCCCTTGTTGAAGCGCTCGCCAGTCCAGAATG 3355
|| ||||| || ||| |||| |||||||| ||| ||| | |||| | |
Sbjct 41548 GCTCTATGCGGTCCTTTTTGGCGCGCTT---CTTGTTGATGCGTTCGGCGCTCCACAGCG 41492
Query 3356 TGTAGGCCTCATGCGCCATCGAACTGGGCGTCGAGAAGTAGGTCCGGCGGTAGCGCTTCT 3415
||||||| ||| || |||||||| || || ||| ||| | |||| |
Sbjct 41491 CATAGGCCTGGTGCTGCAGGCTGCTGGGCGTGGAAAACAGCGTCTTGCGCCAATGCTTGT 41432
Query 3416 GCATCGCCATACCGCTGGCGACCTTGTTCAGCTCCTTGAACTTGAACGTCCAGAAGAACT 3475
| || |||||||||||||| ||||| ||||||| |||| ||| ||| ||||| |
Sbjct 41431 GGATGGCCATACCGCTGGCCACCTTCCACAGCTCCGTGAAGTTGTTGACCCAAAAGAATT 41372
Query 3476 CGTCGAAGTAGAAGTTGCCGTGGTAGCCCTGGGCAGTCCGCGCGTTGGTGCCGAGGAAGT 3535
| ||||| |||| ||||||||||| ||| || || || ||| | ||||| ||||| |
Sbjct 41371 CATCGAAATAGAGATTGCCGTGGTACGACTGCGCGGTGCGGGCGCTCGTGCCCAGGAAAT 41312
Query 3536 GCAATTCCGCGCCGTTCGGCAGGATGATCGGGTCGCCCTTCAGTTCGACACCTACCGCAT 3595
|| ||||| || ||||| ||| ||||||||||||| |||| || ||||
Sbjct 41311 ACAGCGTGGCGCCATTGCTCAGGACGATGGGGTCGCCCTTCAAATCGA----TATCGCAA 41256
Query 3596 CGCGC----GCGAAGGCCTGGATATACGCCTTGAAGATGTGCGCTTGGGCCTTGCTGGCC 3651
|| | || || || ||| ||| | ||| | || || || || |||||||
Sbjct 41255 TGCTCCTTGGCAAACGCGATGATGTACTGCCGGAAAACATGGGCCTGCGCACGGCTGGCC 41196
Query 3652 GACAGGAATATCTGGTTGCGCCCCGTTTCCAGCGCGTCGATCAGCGCCTCGCGGGCGAAG 3711
|| || || ||||| ||||| ||||| | ||| || || ||||| ||||||||| |||||
Sbjct 41195 GAAAGAAAAATCTGATTGCGGCCCGTCTTCAGGGCATCAATCAGGGCCTCGCGGCCGAAG 41136
Query 3712 TAGAACGTGGCGCCGATCTGCCGCGACTTGAGAATCACGCGGGTTCGCTGAT-TACCCGC 3770
|| |||| || |||||||| ||||| |||||||| |||| || ||||| | | | ||
Sbjct 41135 TACCACGTTGCCCCGATCTGGCGCGATTTGAGAATGGCGCGCGTGCGCTGCTGGATCTGC 41076
Query 3771 GCGGTACCA-GTCTTTCTGGTAGTCGAAGCAACCG--TCGAGGAAGGCCTCGACCAGT-T 3826
| |||| || ||| ||||||| ||| || || || || || ||| | ||
Sbjct 41075 TC-CCACCATGTGTTT-TGGTAGTTGAA--AAGCGAATCCAGAAATGCC----CGTGTGA 41024
Query 3827 TCTCGGTCAGTTCCTC--AC-TGATGTCGTTGCGCTTCGGCTTGCGCTTGGGACCTTCGT 3883
||| | || ||||| || ||| || ||||||| |||| ||| || || | |
Sbjct 41023 TCTTGTCCACGTCCTCGGACGTGAAGTGATTGCGCTCGGGCTGCTTCTTAGGTCCGGCAT 40964
Query 3884 TACGCTTGGCAA-GCTCGGGGTTCAGGTCGGTTTCCGTACCACCGCCCTGGTAGCGCTGG 3942
| ||||| ||| | || || ||||| || | ||| || || || ||| ||
Sbjct 40963 TGCGCTTTTCAATGGTC-GGATTCAGATCCGATTCTCGGCCCGTGCGCTCGTATTTGTGC 40905
Query 3943 ATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGCAGGTCGATTTCCTTGTAGTCACCGCCG 4002
| |||||| |||||| | || |||| |||||||||||||||||| ||| |
Sbjct 40904 ACGCGCGCCAAGCGCTCCATGGCACGCCCCAGCGCGTCGATTTCCTTGTAGTCGCCGTTG 40845
Query 4003 GTCTTGCCGTCCTTCAGGATCAAC-TGAACCAACCGGGCTTCCAGGGCGCCCCCGATCCG 4061
|||||| ||||| ||| | | || | || || |||||| | ||| ||| ||
Sbjct 40844 CCCTTGCCCTCCTTGTTGATGAGCGTGCA-CAGGCGCATTTCCAGCGATCCCTCGACACG 40786
Query 4062 TTCTACGCTGTCGGCCCGGTCCCATCCGTCGCGGTCCTTCCATGAGTGAAGGGTCTTGTC 4121
|| ||| | |||| |||||||| ||| | ||||| ||| || || | |
Sbjct 40785 CTCCACGGGCTTGGCCGCATCCCATCCATCGGCCTTTTTCCAGTCGTGCAGCGTGGT-AC 40727
Query 4122 CTTC-TCGCCCAGGTGGTCGGCGATGTCGCAGACACGCCAGCCCATCCAGTACAG 4175
| | ||||||||| |||||||| | | || ||||| |||||||| |||||
Sbjct 40726 GTGCAATGCCCAGGTGCTCGGCGATATGGGTGATGCGCCACCCCATCCAATACAG 40672
Score = 266 bits (294), Expect = 7e-67
Identities = 341/471 (72%), Gaps = 0/471 (0%)
Strand=Plus/Minus
Query 31659 CTGGGCGGNNNCGCCGCAGGCTTCAACCGGGCGCGTCCGCGGGTCGGCAACGTCGAGGCC 31718
|||||||| ||| || |||||||| || | || || || |||||| | ||||
Sbjct 10252 CTGGGCGGCGGCGCGCGTGGTTTCAACCGCGCCAGCCCCCGAGTGGGCAACCTGCAGGCG 10193
Query 31719 CATTGGGAATGCCTTGGTGGCATCGACGTGGACCCGGCCGGCCTCCGCGACTTCGAGCGC 31778
| | ||||| || ||||||||||||||||||||| || |||| ||||||| |||
Sbjct 10192 AAATTCCGCTGCCTGGGCGGCATCGACGTGGACCCGGCCAGCATCCGGGACTTCGGCCGC 10133
Query 31779 CTGGCCGGTGTCCCGGGCACCCTGCTGGACCTGTTCACCCGCGACCAATACATCCGCTTC 31838
|||||||| || || |||||| |||||||||||||| |||||| |||||| | |||
Sbjct 10132 CTGGCCGGCGTGCCCGGCACCGTGCTGGACCTGTTCGACCGCGAGCAATACCGCACATTC 10073
Query 31839 CATGGAACGGAGCCTCCCGCCGGTTGGCGGGAGGCAACCCCGGAGGAAATCCGCCGCGCC 31898
|| || | ||||| || || | ||||| || || || | | ||| |||| |||||
Sbjct 10072 CACGGCGCCGAGCCGCCAGCGGACTGGCGCGAAGCCACAGCCGCGGATATCCAGCGCGCA 10013
Query 31899 GCCGGCGGGCGCCGACCGGATGCCGTGTTCATCAGCTCGCCCTGCAAAGGCGCCAGCGGC 31958
|| ||||| || ||| | |||||| | | | |||||||| || |||||||
Sbjct 10012 GCTGGCGGCGAACGGCCGAACATCGTGTTTCTGTCCGCTCCCTGCAAGGGATTCAGCGGC 9953
Query 31959 CTGCTGTCGGAGAAGATGAGCCTGACTCCGAAGTACCAGGCGCTGAACGAGTTGACGCTG 32018
|||||||| ||| | |||| || ||||||||||| || ||| ||||||||
Sbjct 9952 CTGCTGTCCGAGGGCAAGAGCAAAACCGACAAGTACCAGGCCCTCAACCGCCTGACGCTG 9893
Query 32019 CGCTGCATCTGGCTGATGGGCGAGGCATGGGCTGATGACCCGGTGCCGCTGATCGTCTTC 32078
||| || | ||||||||| ||||||||| ||||| ||| |||| | | |||
Sbjct 9892 CGCGGCGTGTGGCTGATGCTGGAGGCATGGAGCGATGATCCGCCCGAGCTGGTGATTTTC 9833
Query 32079 GAGAACGTCCCGCGTCTGGCGAGCCGCGGCCGGCACCTGCTGGACCAGATC 32129
|||||||| ||||| | || | |||||||||||||||||||||||||||
Sbjct 9832 GAGAACGTGCCGCGCATCGCCACGCGCGGCCGGCACCTGCTGGACCAGATC 9782
Score = 219 bits (242), Expect = 1e-52
Identities = 384/554 (69%), Gaps = 9/554 (2%)
Strand=Plus/Minus
Query 1460 TCCCCGATCATCTCATTAA---CCTGCTGCAGGCGCGTCTGCATTGGCGCGAGTTCCAAG 1516
||||| ||| ||||| | ||||| | ||||||||||| ||| || ||| |
Sbjct 43354 TCCCCCATCCATTCATTGATGGCCTGCGCGAAGCGCGTCTGCAGGGGCTGGATTTCGTTG 43295
Query 1517 CTTGCCCAGACCGCTGCTGCGTCG--CTAATGGATCCGAACCCACCAGCGTTCTGCGGCA 1574
| || | ||| ||| |||| | | || | ||||| ||||| || || |||||
Sbjct 43294 CGCGCGAACACCCGTGCAGCGTTGACCACATCG--CCGAAGCCACCTGCATTGGCCGGCA 43237
Query 1575 CCACCCCCATCAGCTGCGGATAGACCCGCAGGCCGGCGAGCTGGTCGTCGCGGCTGATGT 1634
|||| ||||| ||||||||| || || || |||| | ||||| |||||||| | ||
Sbjct 43236 CCACGCCCATGAGCTGCGGAGGCACGCGGTGGGCGGCCAATTGGTCATCGCGGCTCACGT 43177
Query 1635 TCTTGATTGAGCCGAACTCGTCCTTGGCCGCCACCTCGCTGACCGGAATCAGTTGGATCC 1694
||||||| | || || |||||||||||| |||||| || || | |||||||||
Sbjct 43176 TCTTGATGTTGAAAAATTCATCCTTGGCCGCCGCCTCGCCGATGGGCAGCAGTTGGATGG 43117
Query 1695 CCTCCTTCTTCCCGTTCGGCGCGTAGACGAACAGGTTGCGGAAATTGCCAGGCCCCTTCG 1754
| | || || ||| |||| | || ||||| |||||||||||||| ||||| |
Sbjct 43116 CTTTCTCTTTGCCGCCGGGCGAATGGAAAAACAGATTGCGGAAATTGCCCATGCCCTTGG 43057
Query 1755 CGGTCTTCAGCGCCGTGCGCAGCGCGTCGATGTCTTCCTCATTCTGTGCGGCGTCGGTCA 1814
| |||| ||| ||||||||| || | || || | | | ||| ||| |||
Sbjct 43056 AAGATTTCAAGGCCTGGCGCAGCGCATCCACATCGTCTTTTGCCACTTCGGGATCGCTCA 42997
Query 1815 TGTAGAGGATGAAGCCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCCGGAACAGCGTGG 1874
||||||||| | ||||| ||||| || |||||||| ||| ||||| ||||||||||
Sbjct 42996 GATAGAGGATGTATCCGGCATGGCTCCCATTGTTGTAATACCGGCGCCGAAACAGCGTGG 42937
Query 1875 CCGACTCGTTCAGCAGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCACTCCGTAGATTT 1934
||||||| || ||| |||| ||| || ||| | ||| ||||| ||| |||||||
Sbjct 42936 CCGACTCATTGAGCCAGGCGGACTGCAGCGCGGCCAGGTACTGCGGCAGTCCATAGATTT 42877
Query 1935 CCTGATTGATGTCGGCCTCGCGCAGTTGGATCACGCTGCCCTTCTCG-AATTCGTGCTCA 1993
|||| | | |||| || | | | ||| | |||| ||||| | || ||||||
Sbjct 42876 CCTGGTGCACATCGGGCTGGAGGATGTGGCAAATGCTG-CCTTCGGGAAACGTGTGCTCT 42818
Query 1994 TCCTTCCAGCTGCG 2007
|||| |||| ||||
Sbjct 42817 TCCTGCCAGGTGCG 42804
Score = 176 bits (194), Expect = 1e-39
Identities = 290/409 (71%), Gaps = 12/409 (3%)
Strand=Plus/Minus
Query 32963 CACTGGCGGCCACTACGGCGTAGTTGGGTTCGACCAATCC--GCCGGCGCGGTGT-CGGC 33019
||| |||||||||||||| || || | ||| | || |||||||| || ||||
Sbjct 9281 CACGGGCGGCCACTACGGAGTGGTGCCCTGGGAC--AGCCAGGCCGGCGCCGTCAGCGGC 9224
Query 33020 CAGTGCGCGGCACGACAACGGTCGATGGAGCGTGGCCGATCCGCGCATGCCGAAGGCGAA 33079
| || | ||||||||||| || ||||||||||| ||||||||||||||| ||
Sbjct 9223 GCG-GCATGCCACGACAACGGCCGCTGGAGCGTGGCAGATCCGCGCATGCCGGCAGCTGC 9165
Query 33080 CGACCGGCTGACCTGCATCATCCAGTCGCTGGATGGCACCTGGCACAGGCCGTTTACCAC 33139
||| ||| ||| |||| ||| ||| ||||| |||||| | || || |||||
Sbjct 9164 TGACAAGCTCGTTTGCCGCATCGTGTCCGAGGACGGCACATGGCACCGCCCTTTCACCAC 9105
Query 33140 CCTGGAACTCGCCGCGCTGCAGAGCTTGGTCGACCCCGAAGAGCAGTTGGTCCTCGACGG 33199
|||||| || || ||||||||| ||||||| ||||| |||| | ||| || |||||
Sbjct 9104 CCTGGAGCTGGCGCACCTGCAGAGCCTGGTCGAACCCGACGAGCTGCTGGAACTGGACGG 9045
Query 33200 CCTGAGCGACAGCGACTGGCGCGAGCGGATCGGCAATGCGGTTCCGCCGGCTGCGGCCGA 33259
| |||||| | | ||||||||| ||||||||||| || || | || | |||
Sbjct 9044 CACCAGCGACCAGGCCAAGCGCGAGCGCATCGGCAATGCCGTGCCCAGCGAGGCCGGCGA 8985
Query 33260 GGCCATCGCCGGCGTGATGGGCACCACCCTGTTGTTGGC--TGAGGCTGGCGAGACCTTC 33317
||||||||| ||| |||||| || ||| || | || |||| |||||| ||||||
Sbjct 8984 AGCCATCGCCCACGTCATGGGCGAAACGCTGCTGCTCGCGTTGAG--TGGCGAAACCTTC 8927
Query 33318 CTGCT-CAGTAGCACGCCGATCTGGGTGCGTCAGGTCGCCGTTGGACTG 33365
| || | ||| |||| |||||||||| | | | ||| | || |||
Sbjct 8926 ATCCTGTCGGCGCA-GCCGGTCTGGGTGCGGCCGATTGCCCTGGGGCTG 8879
Score = 125 bits (138), Expect = 2e-24
Identities = 321/481 (67%), Gaps = 32/481 (7%)
Strand=Plus/Minus
Query 4402 CAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAACATCGAGCGCGA 4461
||| | ||||||| | || ||||| || || || || ||||||| ||| || |
Sbjct 40367 CAAGTTGTTCCGCGTGGCTACTGAAGGTGCCACTACTGATGGCCGCACCATTTCTCGGGC 40308
Query 4462 CTGGATCGAGCAGATGGCCGCGCAG-TACGACCCGAACACCTACGGCGCGCGGATCAACT 4520
||||||||||| ||||| |||| | ||||||||| | |||| ||| || ||
Sbjct 40307 GTGGATCGAGCAAATGGCT-CGCAACTTCGACCCGAAGAAATACGCCGCCCGTGTCTGGA 40249
Query 4521 GCGAGCACATCAAGTG-GGCCTG--GCCGGCTGGTGAGTTCGGCGCCTATGGCGACGTGC 4577
||||||||| | | |||||| ||| | | ||| | |||| | ||||||||||
Sbjct 40248 TCGAGCACAT---GCGCGGCCTGCTGCCTGACAGCTCGTTTGCCGCCCAGGGCGACGTGC 40192
Query 4578 TGGC-GTGCAAGGCGGAAGAGATCGACATCAACGGGCAGAAG--AAGCTGGCCCTCTTCG 4634
| | ||||| | | ||| || |||||| | ||||| || || | |
Sbjct 40191 TTTCCGTGCAGGCC--AAG----------CAGGAGGCAGACGGCAAGCTCGCGCTGTATG 40144
Query 4635 CCCAACTGGAGCCCAACCAGGCGCTGCTGGAACTGAACAAGCAGCGGCAGAAGGTCTACA 4694
| || | ||||| | | ||| | | | ||| || || | |||||| |||| |
Sbjct 40143 CGCAGATTCAGCCCCTGGACTCTCTGATCGCCATCAACCAGAAGGGCCAGAAGCTCTATA 40084
Query 4695 CCTCGGTCGAGATCGATCCCAAGTTCGCCGACACCGGCAAGGCCTACTTGGTCGGCCTGG 4754
|||| ||||| | || ||| | ||||| | | |||| ||||||| ||||||||||||
Sbjct 40083 CCTCCATCGAGGTGGACCCCGATTTCGCGGGCTCCGGAGAGGCCTATATGGTCGGCCTGG 40024
Query 4755 CCATCACCGACTCCCCCGCCAGCCTGGGTACCGAGGCGCTCTCCTT-------CAGC--G 4805
|| |||||||| | || ||||||||||| |||||| ||| || ||||
Sbjct 40023 CCGTCACCGACACGCCGGCCAGCCTGGGCACCGAGATGCTGCAGTTTGCCGCGCAGCATC 39964
Query 4806 CCAAGAACGGGACCCTCGCCAGCCGCAAGACCAATCCCGACACCCTGTTCAGCGCTGCCG 4865
|||| | | | | || ||| ||||||||| ||| || | || ||| |||| ||| ||||
Sbjct 39963 CCAACACCAGCCCGCTGGCCGGCCGCAAGATCAAGCCGGGCAACCTCTTCACCGCCGCCG 39904
Query 4866 A 4866
|
Sbjct 39903 A 39903
Score = 82.4 bits (90), Expect = 2e-11
Identities = 140/204 (69%), Gaps = 12/204 (6%)
Strand=Plus/Minus
Query 12349 ACCGGCGGCGCCCTCGCCCGCTTGGCACACATCCGCCAGTCGATCGCCGACATCCTCACA 12408
|| ||| ||||| || || ||| || | ||||| || || | ||||||||| |
Sbjct 33228 ACTGGCCGCGCCATCACCGAGGTGGAGCATCTGCGCCAATCCATTGGCGACATCCTGGCC 33169
Query 12409 ACTCGCATCGGTACCCGCGTCATGCGACGCGAATACGGCAGCCAGTTGCCGGAGCTGATC 12468
|| | |||||| || ||||||||||| ||||| |||||| | |||| | |||| |
Sbjct 33168 ACGCCCATCGGCACGCGCGTCATGCGCCGCGATTACGGCTCGCTTGTGCCCGCGCTGGTG 33109
Query 12469 GATGCTCCGTTCAACGACACCAC------CCGCCTGCAGGTCTATGCCGCCACCGCCATG 12522
|| || |||| |||||| |||||||| | ||||| ||||||
Sbjct 33108 GACCAGCCCGACAACCGCACCACTGAAATCCGCCTGCTG------TCCGCCGCCGCCAGT 33055
Query 12523 GCCCTCATGCGCTGGGAACCGCGC 12546
||||| ||||||||||| ||||||
Sbjct 33054 GCCCTGATGCGCTGGGAGCCGCGC 33031
>seq13794
Length=941
Score = 80.6 bits (88), Expect = 6e-11
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 5548 CACACCGACTTCGACACCGCAATCACCTACGCCATGCTCGACGCCTGGGCCAAGTTCCCC 5607
|| ||| ||||||| || | || | ||||| ||||||| |||||||||||||||||
Sbjct 107 CAGACCAACTTCGATACGTCGTTCCCTTACGCGCTGCTCGATGCCTGGGCCAAGTTCCCA 48
Query 5608 GAGTTCCAGGCCCTGCTGCGCGACGCGATCCTCAAGCGCCAGGCCCT 5654
|| ||||||| |||||| | |||| || || |||| ||||| ||
Sbjct 47 GAATTCCAGGTGCTGCTGACCAACGCTATTGTCGAGCGGCAGGCACT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113714061374836
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |