Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq7272 432 8e-117 seq13794 80.6 6e-11 >seq7272 Length=98981 Score = 432 bits (478), Expect = 8e-117 Identities = 897/1315 (68%), Gaps = 59/1315 (4%) Strand=Plus/Minus Query 17048 ATCATCGGCCTGGTAGCCACCG--CCGAAGACGCCGACGCCACCGCCTTTCCACTCGATA 17105 |||||||||||||| ||||||| || | | ||||||||| ||||| |||||||||| Sbjct 25864 ATCATCGGCCTGGTGGCCACCGGCCCCACG--GCCGACGCCGAGGCCTTCCCACTCGATA 25807 Query 17106 CGCCGGTACTCATCACCAACGTGCAGGCTGCCATCGGCAAGGCGGGCACCAGCGGTACGC 17165 | ||||| ||| |||||||| | || || | | |||||||||||||| || |||| Sbjct 25806 CCCCGGTCCTCTTCACCAACATCGAGAAAGCGCTGGACAAGGCGGGCACCACGGGCACGC 25747 Query 17166 TGCCCGCAAGCCTGCAAGCA-ATCGCCGACCAGGCCAACGCCGCCACTGTGGTGGTGCGG 17224 |||||| | |||| |||| ||| |||||| || | ||| || | ||||| Sbjct 25746 TGCCCG-AGGCCTTGAAGCTCATCAAGGACCAGTCCCGCCCCGTGCTGGTCATCGTGCGT 25688 Query 17225 GTGAAGCCGGGCG-AGGATGAAGCCGCGACCAATAGCGCGGTC------ATCGGC----- 17272 ||| ||||| ||| || | ||| || | || || | | | || Sbjct 25687 GTGCCCGTGGGCGCAGGCCAAACACCCGAAGAA-ATCGAGGCCGACCAGACCAGCCTGGT 25629 Query 17273 ----GGCGTCAGCGCCGATGGCAAGTACACCGGCATGAAGGCCTTGCTTGCCGCCAAGGC 17328 |||| || || | |||||| | ||||||| |||| || | |||| || Sbjct 25628 GGTTGGCGACAACGTGGCCGGCAAGCGCTCCGGCATTCAGGCGCTGATCACCGCGCAGCA 25569 Query 17329 CCGCTTGGGCGTGGTACCGCGCATCCTCGGCGTGCCGGGCCTGGATACCCAGCCGGTCGC 17388 | |||||||| ||| |||||||| |||| || || ||||| ||| |||| || || Sbjct 25568 GCAGCTGGGCGTGAAACCCCGCATCCTGGGCGCCCCCGGGCTGGACACCAAGCCCGTGGC 25509 Query 17389 TACCGCACTCATCGCCATCGCCCAGCAACTGCGCGCCTTCGCTTATGT-CTCCGCCAGCG 17447 || |||| ||| |||| || ||||||||| | || || || | | || || Sbjct 25508 GGATGCCCTCACGGCCGCCGCCATCCAGCTGCGCGCCATGGCCTACGTGCAGGGGCA-CG 25450 Query 17448 GCTGCAAGACAAAGGAAG--AGGCCACCGCCTACCGCGAGAACTTCGCCGCGCGCGAAGC 17505 || | ||| | | || ||||| || || | || |||| ||| |||||| | Sbjct 25449 GCGCC--GACGATGTGAGCGAGGCCCTGGCGTATGCAGGGAGTTTCGGCGCCCGCGAAAC 25392 Query 17506 CATGGTGATCTGGCCGGACTTCCTGACGTGGAGCACCGTGGTCAACCAGACCGTGCCTGC 17565 ||||||||||||||| || ||| | |||| |||| || ||| || || | ||| Sbjct 25391 CATGGTGATCTGGCCCGATTTCAAAGCCTGGAACACCACGGCAAACAAGGCCATCAATGC 25332 Query 17566 GCCAGCTGTTGCCCAGGCACTGGGCTTGCGTGCCCGGATCGATCAGGAGGTCGGTTGGCA 17625 ||| ||||| ||| | || |||| |||| ||||| ||||| |||| |||||||| Sbjct 25331 GCCGGCTGTGGCCTACGCGATGGGGCTGCGCGCCCGCATCGACGTGGAGCAAGGTTGGCA 25272 Query 17626 CAAGACCCTGTCGAACGTCGCCG-TCAACGGCGTGACCGGCATCAGCGCCGACGTGTTCT 17684 |||||||||||| ||||| |||| | || ||| | ||||||||| |||||| | Sbjct 25271 CAAGACCCTGTCAAACGT-GCCGCTAAATGGCCCGGTGGGCATCAGCAAGGACGTGCATT 25213 Query 17685 GGGACCTGCAGAGCCCCAGCACCGACGCCAACTACCTCAACGAGAACGAGGTCACCACCC 17744 |||||||| ||| | || ||||| ||| ||||| ||| | | |||||||| | Sbjct 25212 TCGACCTGCAAAGCTCGGAGACGGACGCAAACCTGCTCAATGAGGGCAACGTCACCACGC 25153 Query 17745 TGGTGCAGGAAGGGGGATTCCGTTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGT 17804 | | | | ||| | || |||||||| ||||||||||||||| || |||| Sbjct 25152 TCATCAACTACCAGGGCTATCGCTTCTGGGGATCGCGCACCTGCAGCACCGACGAACTGT 25093 Query 17805 TCGCCTTCGAGAACTACACCCGCACCGCCCAGGTGCTGGCCGACACTATCGCCGAAGCGC 17864 || |||||| | | ||||| |||||||||||||||||||| || || || | Sbjct 25092 TCCGATTCGAGTCCAGCGTGCGCACTGCCCAGGTGCTGGCCGACACCATGGCAGA--GGG 25035 Query 17865 ACATGTGGGC--GGTTGACAAGCCCATGCACCCGTCACTGGTGCGCGACATCCTTGAGGG 17922 ||| | | | || ||||||||||||||||| ||||| |||||| | || || Sbjct 25034 TCATTTCGCCTTTGTCGACAAGCCCATGCACCCCAGCATGGTGAAAGACATCGTGGAAGG 24975 Query 17923 CGTGAACGCGAAGTTCCGCGAGCTCAAGGGGCTCGGTCTGATCATCGACGCCCAGGCCTG 17982 | | || || ||||||||||| ||||||| || || ||| |||||| || ||||| Sbjct 24974 CATCAATGCCAAGTTCCGCGAACTCAAGGCCCTGGGCTACATCCTCGACGGCCGCGCCTG 24915 Query 17983 GTACGACCCCAACGTGAACGACAAGGACACGCTCAAGGCCGGCAAGCT-GCGCATCACCT 18041 || ||| || | || ||| || || ||||||||||||||||||| | || | | || Sbjct 24914 GTTTGACGCCGAGGTCAACACCACAGAAGCGCTCAAGGCCGGCAAGCTGGTGCTTGA-CT 24856 Query 18042 ACGACTACACCCCGGTGCCGCCGCTCGAGGACCTGACCTTCTTCCAGAAGATCACCGACA 18101 |||||||||| || ||||||||||| || |||||| ||| |||| ||||||||| Sbjct 24855 ACGACTACACGCCCGTGCCGCCGCTGGAAGACCTGGGATTCCGCCAGCGCATCACCGACC 24796 Query 18102 GCTATCTCGTCGACTTCGCCAGCCGCGTCAACGCCTGACGCCCAGCGCTCCCCGGACGGG 18161 ||||| ||| ||||||||||| ||||| | | || |||| ||||| || Sbjct 24795 GCTATTTCGGCGACTTCGCCATGCGCGTGGGCAC----CGGCCAG-TAAGCCCGGCCG-- 24743 Query 18162 GAGCCGACCCACCTGATTCCCGGAGAGCCCTACCATGGCCATGCCGCGCAAGCTCAAGAA 18221 | ||| | | | ||||| || ||||||| |||| ||||| |||||||| Sbjct 24742 ----CATTCCAGCACA---CAGGAGATCCACACCATGGGACTGCCCCGCAAACTCAAGAA 24690 Query 18222 CATGAACCTCTTCAACGACGGCGGTAGCTACCAGGGCG----TCGTGAAGTCCTGCACCC 18277 | | | ||||| |||||||| | |||| ||||| | ||||| ||||| Sbjct 24689 CTTCGCCACCTTCATCGACGGCGTGAACTACATGGGCGAAATGCCCGAAGT----CACCC 24634 Query 18278 TGCCCCCGCTGGCCCGCAAGATGGAGGCCTTCCGCGGGGGCGGCATGAACGGCCC 18332 | ||| | || ||||||||||||||| | ||| | ||| |||||||| ||||| Sbjct 24633 TCCCCACCCTCACCCGCAAGATGGAGGAATACCGGGCGGGTGGCATGAATGGCCC 24579 Score = 401 bits (444), Expect = 1e-107 Identities = 967/1435 (67%), Gaps = 45/1435 (3%) Strand=Plus/Minus Query 2762 CCGGGAAGAACTGGCGCACCAGCTGCGCGACGCCAGAGCCCATGCCGGTGGTGTCGACGC 2821 |||||||||||| ||| | |||| |||||| ||||| || |||| || | || Sbjct 42082 CCGGGAAGAACTTTTTCACGATCTGCAGGACGCCCTGGCCCAGACCTGTGGAATCAATGC 42023 Query 2822 CGATGTAGGTGACCCAGTAGCGCTGGGTCACCTTGCGGATGAACTCGGCCTGTTCGGCGA 2881 ||||| | || ||| || |||| || |||||||| |||||||| | | | Sbjct 42022 AGATGTGTGCCACGTTGTATTTCTCTGTCATCTGGCGGATGACTTCGGCCTGCGCTTCAA 41963 Query 2882 AGTCCTTGCCGCGGAATTGATGGCGCTCCAGCACGCGGAACTTGCCGCCCGGTACCGCCG 2941 ||||| || ||| || ||||||||||| |||||||||||||||||| | | Sbjct 41962 AGTCCGCTCCCTTGAACTGCATGCGCTCCAGCATGCGGAACTTGCCGCCCGGCTTTTCTG 41903 Query 2942 GAGGCGCCACCACCACCAGACCCGCGGTGTCGCCCGTCTCGGCGGGGTCATAGCCCAGCC 3001 | || |||| ||| || || ||||| | ||||||||| | | |||||||||||| | || Sbjct 41902 GCGGGGCCAGCACTACAAGGCCCGCCGAGTCGCCCGTATGGCTGGGGTCATAGCCAATCC 41843 Query 3002 ACACCTGGCGATCACCGAACGGCCGCAGCGCGAACGGCTTGTAGTC-CTCCGACCACAGG 3060 | || | | || |||||||||| || ||| |||||| | || |||| || Sbjct 41842 AGACGGGCTTTTGGCCAAACGGCCGCAACGTGAAGGGCTTGAAATCGCTCCACGCA---- 41787 Query 3061 TCCCAGCTATCGACCATGCACGGCTGCAGCATGGTCAACGGGAAAATGCTCGCGCCGTCG 3120 |||||||| || | ||| || |||| ||| || |||||||| | ||| Sbjct 41786 TCCCAGCTGTCCGCATGGCAGCGCATCAGCGTGGACAGCGGGAAAACAGCGAAGGTGTCA 41727 Query 3121 TCGACGAACTGGCACATCAGCAGGTTCTGGAAAGCCTCGGCGTCGTACTCGAGACGCAGC 3180 ||||| ||| |||||| |||||||| | | ||||| | ||||||| ||||| Sbjct 41726 TCGACAAACCCGCACATGAGCAGGTTGTCCCATTCCTCGTCCGAATACTCGAAGCGCAGT 41667 Query 3181 TCGTCGATGTCGAACAGATCGCAGCCACGGGCCTCGGCATCGAGGATGGTGACGATCTGG 3240 ||||| | ||||||||||| |||||| | | || ||||| || | ||||| ||||| Sbjct 41666 TCGTCAAGGTCGAACAGATTGCAGCCGCCGCGCTGCGCATCCAGCACCGTGACAATCTGC 41607 Query 3241 CGCCAGATGCGGTCCTCGCACAGTCGCCCTTGCTGC-AGG-GCGTCATGACTTACGTCGA 3298 ||||| || |||||||| | || | | | || ||| ||| ||| || | ||| | Sbjct 41606 CGCCATATCTTGTCCTCGC-CGGTGAAGCCTCCAGCCAGGTGCGA-ATGGCTCAGGTCCA 41549 Query 3299 TCTTGATGCGATCGGC---GGCCGGCTTGCCCTTGTTGAAGCGCTCGCCAGTCCAGAATG 3355 || ||||| || ||| |||| |||||||| ||| ||| | |||| | | Sbjct 41548 GCTCTATGCGGTCCTTTTTGGCGCGCTT---CTTGTTGATGCGTTCGGCGCTCCACAGCG 41492 Query 3356 TGTAGGCCTCATGCGCCATCGAACTGGGCGTCGAGAAGTAGGTCCGGCGGTAGCGCTTCT 3415 ||||||| ||| || |||||||| || || ||| ||| | |||| | Sbjct 41491 CATAGGCCTGGTGCTGCAGGCTGCTGGGCGTGGAAAACAGCGTCTTGCGCCAATGCTTGT 41432 Query 3416 GCATCGCCATACCGCTGGCGACCTTGTTCAGCTCCTTGAACTTGAACGTCCAGAAGAACT 3475 | || |||||||||||||| ||||| ||||||| |||| ||| ||| ||||| | Sbjct 41431 GGATGGCCATACCGCTGGCCACCTTCCACAGCTCCGTGAAGTTGTTGACCCAAAAGAATT 41372 Query 3476 CGTCGAAGTAGAAGTTGCCGTGGTAGCCCTGGGCAGTCCGCGCGTTGGTGCCGAGGAAGT 3535 | ||||| |||| ||||||||||| ||| || || || ||| | ||||| ||||| | Sbjct 41371 CATCGAAATAGAGATTGCCGTGGTACGACTGCGCGGTGCGGGCGCTCGTGCCCAGGAAAT 41312 Query 3536 GCAATTCCGCGCCGTTCGGCAGGATGATCGGGTCGCCCTTCAGTTCGACACCTACCGCAT 3595 || ||||| || ||||| ||| ||||||||||||| |||| || |||| Sbjct 41311 ACAGCGTGGCGCCATTGCTCAGGACGATGGGGTCGCCCTTCAAATCGA----TATCGCAA 41256 Query 3596 CGCGC----GCGAAGGCCTGGATATACGCCTTGAAGATGTGCGCTTGGGCCTTGCTGGCC 3651 || | || || || ||| ||| | ||| | || || || || ||||||| Sbjct 41255 TGCTCCTTGGCAAACGCGATGATGTACTGCCGGAAAACATGGGCCTGCGCACGGCTGGCC 41196 Query 3652 GACAGGAATATCTGGTTGCGCCCCGTTTCCAGCGCGTCGATCAGCGCCTCGCGGGCGAAG 3711 || || || ||||| ||||| ||||| | ||| || || ||||| ||||||||| ||||| Sbjct 41195 GAAAGAAAAATCTGATTGCGGCCCGTCTTCAGGGCATCAATCAGGGCCTCGCGGCCGAAG 41136 Query 3712 TAGAACGTGGCGCCGATCTGCCGCGACTTGAGAATCACGCGGGTTCGCTGAT-TACCCGC 3770 || |||| || |||||||| ||||| |||||||| |||| || ||||| | | | || Sbjct 41135 TACCACGTTGCCCCGATCTGGCGCGATTTGAGAATGGCGCGCGTGCGCTGCTGGATCTGC 41076 Query 3771 GCGGTACCA-GTCTTTCTGGTAGTCGAAGCAACCG--TCGAGGAAGGCCTCGACCAGT-T 3826 | |||| || ||| ||||||| ||| || || || || || ||| | || Sbjct 41075 TC-CCACCATGTGTTT-TGGTAGTTGAA--AAGCGAATCCAGAAATGCC----CGTGTGA 41024 Query 3827 TCTCGGTCAGTTCCTC--AC-TGATGTCGTTGCGCTTCGGCTTGCGCTTGGGACCTTCGT 3883 ||| | || ||||| || ||| || ||||||| |||| ||| || || | | Sbjct 41023 TCTTGTCCACGTCCTCGGACGTGAAGTGATTGCGCTCGGGCTGCTTCTTAGGTCCGGCAT 40964 Query 3884 TACGCTTGGCAA-GCTCGGGGTTCAGGTCGGTTTCCGTACCACCGCCCTGGTAGCGCTGG 3942 | ||||| ||| | || || ||||| || | ||| || || || ||| || Sbjct 40963 TGCGCTTTTCAATGGTC-GGATTCAGATCCGATTCTCGGCCCGTGCGCTCGTATTTGTGC 40905 Query 3943 ATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGCAGGTCGATTTCCTTGTAGTCACCGCCG 4002 | |||||| |||||| | || |||| |||||||||||||||||| ||| | Sbjct 40904 ACGCGCGCCAAGCGCTCCATGGCACGCCCCAGCGCGTCGATTTCCTTGTAGTCGCCGTTG 40845 Query 4003 GTCTTGCCGTCCTTCAGGATCAAC-TGAACCAACCGGGCTTCCAGGGCGCCCCCGATCCG 4061 |||||| ||||| ||| | | || | || || |||||| | ||| ||| || Sbjct 40844 CCCTTGCCCTCCTTGTTGATGAGCGTGCA-CAGGCGCATTTCCAGCGATCCCTCGACACG 40786 Query 4062 TTCTACGCTGTCGGCCCGGTCCCATCCGTCGCGGTCCTTCCATGAGTGAAGGGTCTTGTC 4121 || ||| | |||| |||||||| ||| | ||||| ||| || || | | Sbjct 40785 CTCCACGGGCTTGGCCGCATCCCATCCATCGGCCTTTTTCCAGTCGTGCAGCGTGGT-AC 40727 Query 4122 CTTC-TCGCCCAGGTGGTCGGCGATGTCGCAGACACGCCAGCCCATCCAGTACAG 4175 | | ||||||||| |||||||| | | || ||||| |||||||| ||||| Sbjct 40726 GTGCAATGCCCAGGTGCTCGGCGATATGGGTGATGCGCCACCCCATCCAATACAG 40672 Score = 266 bits (294), Expect = 7e-67 Identities = 341/471 (72%), Gaps = 0/471 (0%) Strand=Plus/Minus Query 31659 CTGGGCGGNNNCGCCGCAGGCTTCAACCGGGCGCGTCCGCGGGTCGGCAACGTCGAGGCC 31718 |||||||| ||| || |||||||| || | || || || |||||| | |||| Sbjct 10252 CTGGGCGGCGGCGCGCGTGGTTTCAACCGCGCCAGCCCCCGAGTGGGCAACCTGCAGGCG 10193 Query 31719 CATTGGGAATGCCTTGGTGGCATCGACGTGGACCCGGCCGGCCTCCGCGACTTCGAGCGC 31778 | | ||||| || ||||||||||||||||||||| || |||| ||||||| ||| Sbjct 10192 AAATTCCGCTGCCTGGGCGGCATCGACGTGGACCCGGCCAGCATCCGGGACTTCGGCCGC 10133 Query 31779 CTGGCCGGTGTCCCGGGCACCCTGCTGGACCTGTTCACCCGCGACCAATACATCCGCTTC 31838 |||||||| || || |||||| |||||||||||||| |||||| |||||| | ||| Sbjct 10132 CTGGCCGGCGTGCCCGGCACCGTGCTGGACCTGTTCGACCGCGAGCAATACCGCACATTC 10073 Query 31839 CATGGAACGGAGCCTCCCGCCGGTTGGCGGGAGGCAACCCCGGAGGAAATCCGCCGCGCC 31898 || || | ||||| || || | ||||| || || || | | ||| |||| ||||| Sbjct 10072 CACGGCGCCGAGCCGCCAGCGGACTGGCGCGAAGCCACAGCCGCGGATATCCAGCGCGCA 10013 Query 31899 GCCGGCGGGCGCCGACCGGATGCCGTGTTCATCAGCTCGCCCTGCAAAGGCGCCAGCGGC 31958 || ||||| || ||| | |||||| | | | |||||||| || ||||||| Sbjct 10012 GCTGGCGGCGAACGGCCGAACATCGTGTTTCTGTCCGCTCCCTGCAAGGGATTCAGCGGC 9953 Query 31959 CTGCTGTCGGAGAAGATGAGCCTGACTCCGAAGTACCAGGCGCTGAACGAGTTGACGCTG 32018 |||||||| ||| | |||| || ||||||||||| || ||| |||||||| Sbjct 9952 CTGCTGTCCGAGGGCAAGAGCAAAACCGACAAGTACCAGGCCCTCAACCGCCTGACGCTG 9893 Query 32019 CGCTGCATCTGGCTGATGGGCGAGGCATGGGCTGATGACCCGGTGCCGCTGATCGTCTTC 32078 ||| || | ||||||||| ||||||||| ||||| ||| |||| | | ||| Sbjct 9892 CGCGGCGTGTGGCTGATGCTGGAGGCATGGAGCGATGATCCGCCCGAGCTGGTGATTTTC 9833 Query 32079 GAGAACGTCCCGCGTCTGGCGAGCCGCGGCCGGCACCTGCTGGACCAGATC 32129 |||||||| ||||| | || | ||||||||||||||||||||||||||| Sbjct 9832 GAGAACGTGCCGCGCATCGCCACGCGCGGCCGGCACCTGCTGGACCAGATC 9782 Score = 219 bits (242), Expect = 1e-52 Identities = 384/554 (69%), Gaps = 9/554 (2%) Strand=Plus/Minus Query 1460 TCCCCGATCATCTCATTAA---CCTGCTGCAGGCGCGTCTGCATTGGCGCGAGTTCCAAG 1516 ||||| ||| ||||| | ||||| | ||||||||||| ||| || ||| | Sbjct 43354 TCCCCCATCCATTCATTGATGGCCTGCGCGAAGCGCGTCTGCAGGGGCTGGATTTCGTTG 43295 Query 1517 CTTGCCCAGACCGCTGCTGCGTCG--CTAATGGATCCGAACCCACCAGCGTTCTGCGGCA 1574 | || | ||| ||| |||| | | || | ||||| ||||| || || ||||| Sbjct 43294 CGCGCGAACACCCGTGCAGCGTTGACCACATCG--CCGAAGCCACCTGCATTGGCCGGCA 43237 Query 1575 CCACCCCCATCAGCTGCGGATAGACCCGCAGGCCGGCGAGCTGGTCGTCGCGGCTGATGT 1634 |||| ||||| ||||||||| || || || |||| | ||||| |||||||| | || Sbjct 43236 CCACGCCCATGAGCTGCGGAGGCACGCGGTGGGCGGCCAATTGGTCATCGCGGCTCACGT 43177 Query 1635 TCTTGATTGAGCCGAACTCGTCCTTGGCCGCCACCTCGCTGACCGGAATCAGTTGGATCC 1694 ||||||| | || || |||||||||||| |||||| || || | ||||||||| Sbjct 43176 TCTTGATGTTGAAAAATTCATCCTTGGCCGCCGCCTCGCCGATGGGCAGCAGTTGGATGG 43117 Query 1695 CCTCCTTCTTCCCGTTCGGCGCGTAGACGAACAGGTTGCGGAAATTGCCAGGCCCCTTCG 1754 | | || || ||| |||| | || ||||| |||||||||||||| ||||| | Sbjct 43116 CTTTCTCTTTGCCGCCGGGCGAATGGAAAAACAGATTGCGGAAATTGCCCATGCCCTTGG 43057 Query 1755 CGGTCTTCAGCGCCGTGCGCAGCGCGTCGATGTCTTCCTCATTCTGTGCGGCGTCGGTCA 1814 | |||| ||| ||||||||| || | || || | | | ||| ||| ||| Sbjct 43056 AAGATTTCAAGGCCTGGCGCAGCGCATCCACATCGTCTTTTGCCACTTCGGGATCGCTCA 42997 Query 1815 TGTAGAGGATGAAGCCGGCGTGGCTGCCGTTGTTGTAGTACTTACGCCGGAACAGCGTGG 1874 ||||||||| | ||||| ||||| || |||||||| ||| ||||| |||||||||| Sbjct 42996 GATAGAGGATGTATCCGGCATGGCTCCCATTGTTGTAATACCGGCGCCGAAACAGCGTGG 42937 Query 1875 CCGACTCGTTCAGCAGGGCGCTCTGTAGGGCGCAGAACCACTCCGGCACTCCGTAGATTT 1934 ||||||| || ||| |||| ||| || ||| | ||| ||||| ||| ||||||| Sbjct 42936 CCGACTCATTGAGCCAGGCGGACTGCAGCGCGGCCAGGTACTGCGGCAGTCCATAGATTT 42877 Query 1935 CCTGATTGATGTCGGCCTCGCGCAGTTGGATCACGCTGCCCTTCTCG-AATTCGTGCTCA 1993 |||| | | |||| || | | | ||| | |||| ||||| | || |||||| Sbjct 42876 CCTGGTGCACATCGGGCTGGAGGATGTGGCAAATGCTG-CCTTCGGGAAACGTGTGCTCT 42818 Query 1994 TCCTTCCAGCTGCG 2007 |||| |||| |||| Sbjct 42817 TCCTGCCAGGTGCG 42804 Score = 176 bits (194), Expect = 1e-39 Identities = 290/409 (71%), Gaps = 12/409 (3%) Strand=Plus/Minus Query 32963 CACTGGCGGCCACTACGGCGTAGTTGGGTTCGACCAATCC--GCCGGCGCGGTGT-CGGC 33019 ||| |||||||||||||| || || | ||| | || |||||||| || |||| Sbjct 9281 CACGGGCGGCCACTACGGAGTGGTGCCCTGGGAC--AGCCAGGCCGGCGCCGTCAGCGGC 9224 Query 33020 CAGTGCGCGGCACGACAACGGTCGATGGAGCGTGGCCGATCCGCGCATGCCGAAGGCGAA 33079 | || | ||||||||||| || ||||||||||| ||||||||||||||| || Sbjct 9223 GCG-GCATGCCACGACAACGGCCGCTGGAGCGTGGCAGATCCGCGCATGCCGGCAGCTGC 9165 Query 33080 CGACCGGCTGACCTGCATCATCCAGTCGCTGGATGGCACCTGGCACAGGCCGTTTACCAC 33139 ||| ||| ||| |||| ||| ||| ||||| |||||| | || || ||||| Sbjct 9164 TGACAAGCTCGTTTGCCGCATCGTGTCCGAGGACGGCACATGGCACCGCCCTTTCACCAC 9105 Query 33140 CCTGGAACTCGCCGCGCTGCAGAGCTTGGTCGACCCCGAAGAGCAGTTGGTCCTCGACGG 33199 |||||| || || ||||||||| ||||||| ||||| |||| | ||| || ||||| Sbjct 9104 CCTGGAGCTGGCGCACCTGCAGAGCCTGGTCGAACCCGACGAGCTGCTGGAACTGGACGG 9045 Query 33200 CCTGAGCGACAGCGACTGGCGCGAGCGGATCGGCAATGCGGTTCCGCCGGCTGCGGCCGA 33259 | |||||| | | ||||||||| ||||||||||| || || | || | ||| Sbjct 9044 CACCAGCGACCAGGCCAAGCGCGAGCGCATCGGCAATGCCGTGCCCAGCGAGGCCGGCGA 8985 Query 33260 GGCCATCGCCGGCGTGATGGGCACCACCCTGTTGTTGGC--TGAGGCTGGCGAGACCTTC 33317 ||||||||| ||| |||||| || ||| || | || |||| |||||| |||||| Sbjct 8984 AGCCATCGCCCACGTCATGGGCGAAACGCTGCTGCTCGCGTTGAG--TGGCGAAACCTTC 8927 Query 33318 CTGCT-CAGTAGCACGCCGATCTGGGTGCGTCAGGTCGCCGTTGGACTG 33365 | || | ||| |||| |||||||||| | | | ||| | || ||| Sbjct 8926 ATCCTGTCGGCGCA-GCCGGTCTGGGTGCGGCCGATTGCCCTGGGGCTG 8879 Score = 125 bits (138), Expect = 2e-24 Identities = 321/481 (67%), Gaps = 32/481 (7%) Strand=Plus/Minus Query 4402 CAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAACATCGAGCGCGA 4461 ||| | ||||||| | || ||||| || || || || ||||||| ||| || | Sbjct 40367 CAAGTTGTTCCGCGTGGCTACTGAAGGTGCCACTACTGATGGCCGCACCATTTCTCGGGC 40308 Query 4462 CTGGATCGAGCAGATGGCCGCGCAG-TACGACCCGAACACCTACGGCGCGCGGATCAACT 4520 ||||||||||| ||||| |||| | ||||||||| | |||| ||| || || Sbjct 40307 GTGGATCGAGCAAATGGCT-CGCAACTTCGACCCGAAGAAATACGCCGCCCGTGTCTGGA 40249 Query 4521 GCGAGCACATCAAGTG-GGCCTG--GCCGGCTGGTGAGTTCGGCGCCTATGGCGACGTGC 4577 ||||||||| | | |||||| ||| | | ||| | |||| | |||||||||| Sbjct 40248 TCGAGCACAT---GCGCGGCCTGCTGCCTGACAGCTCGTTTGCCGCCCAGGGCGACGTGC 40192 Query 4578 TGGC-GTGCAAGGCGGAAGAGATCGACATCAACGGGCAGAAG--AAGCTGGCCCTCTTCG 4634 | | ||||| | | ||| || |||||| | ||||| || || | | Sbjct 40191 TTTCCGTGCAGGCC--AAG----------CAGGAGGCAGACGGCAAGCTCGCGCTGTATG 40144 Query 4635 CCCAACTGGAGCCCAACCAGGCGCTGCTGGAACTGAACAAGCAGCGGCAGAAGGTCTACA 4694 | || | ||||| | | ||| | | | ||| || || | |||||| |||| | Sbjct 40143 CGCAGATTCAGCCCCTGGACTCTCTGATCGCCATCAACCAGAAGGGCCAGAAGCTCTATA 40084 Query 4695 CCTCGGTCGAGATCGATCCCAAGTTCGCCGACACCGGCAAGGCCTACTTGGTCGGCCTGG 4754 |||| ||||| | || ||| | ||||| | | |||| ||||||| |||||||||||| Sbjct 40083 CCTCCATCGAGGTGGACCCCGATTTCGCGGGCTCCGGAGAGGCCTATATGGTCGGCCTGG 40024 Query 4755 CCATCACCGACTCCCCCGCCAGCCTGGGTACCGAGGCGCTCTCCTT-------CAGC--G 4805 || |||||||| | || ||||||||||| |||||| ||| || |||| Sbjct 40023 CCGTCACCGACACGCCGGCCAGCCTGGGCACCGAGATGCTGCAGTTTGCCGCGCAGCATC 39964 Query 4806 CCAAGAACGGGACCCTCGCCAGCCGCAAGACCAATCCCGACACCCTGTTCAGCGCTGCCG 4865 |||| | | | | || ||| ||||||||| ||| || | || ||| |||| ||| |||| Sbjct 39963 CCAACACCAGCCCGCTGGCCGGCCGCAAGATCAAGCCGGGCAACCTCTTCACCGCCGCCG 39904 Query 4866 A 4866 | Sbjct 39903 A 39903 Score = 82.4 bits (90), Expect = 2e-11 Identities = 140/204 (69%), Gaps = 12/204 (6%) Strand=Plus/Minus Query 12349 ACCGGCGGCGCCCTCGCCCGCTTGGCACACATCCGCCAGTCGATCGCCGACATCCTCACA 12408 || ||| ||||| || || ||| || | ||||| || || | ||||||||| | Sbjct 33228 ACTGGCCGCGCCATCACCGAGGTGGAGCATCTGCGCCAATCCATTGGCGACATCCTGGCC 33169 Query 12409 ACTCGCATCGGTACCCGCGTCATGCGACGCGAATACGGCAGCCAGTTGCCGGAGCTGATC 12468 || | |||||| || ||||||||||| ||||| |||||| | |||| | |||| | Sbjct 33168 ACGCCCATCGGCACGCGCGTCATGCGCCGCGATTACGGCTCGCTTGTGCCCGCGCTGGTG 33109 Query 12469 GATGCTCCGTTCAACGACACCAC------CCGCCTGCAGGTCTATGCCGCCACCGCCATG 12522 || || |||| |||||| |||||||| | ||||| |||||| Sbjct 33108 GACCAGCCCGACAACCGCACCACTGAAATCCGCCTGCTG------TCCGCCGCCGCCAGT 33055 Query 12523 GCCCTCATGCGCTGGGAACCGCGC 12546 ||||| ||||||||||| |||||| Sbjct 33054 GCCCTGATGCGCTGGGAGCCGCGC 33031 >seq13794 Length=941 Score = 80.6 bits (88), Expect = 6e-11 Identities = 82/107 (77%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 5548 CACACCGACTTCGACACCGCAATCACCTACGCCATGCTCGACGCCTGGGCCAAGTTCCCC 5607 || ||| ||||||| || | || | ||||| ||||||| ||||||||||||||||| Sbjct 107 CAGACCAACTTCGATACGTCGTTCCCTTACGCGCTGCTCGATGCCTGGGCCAAGTTCCCA 48 Query 5608 GAGTTCCAGGCCCTGCTGCGCGACGCGATCCTCAAGCGCCAGGCCCT 5654 || ||||||| |||||| | |||| || || |||| ||||| || Sbjct 47 GAATTCCAGGTGCTGCTGACCAACGCTATTGTCGAGCGGCAGGCACT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113714061374836