Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_003309.1
Length=53373
Score E
Sequences producing significant alignments: (Bits) Value
seq11176 798 0.0
seq11405 297 7e-76
seq7642 251 2e-62
seq14366 163 1e-35
seq11894 105 2e-18
seq11041 86.0 2e-12
seq10795 82.4 3e-11
>seq11176
Length=58678
Score = 798 bits (884), Expect = 0.0
Identities = 985/1330 (74%), Gaps = 19/1330 (1%)
Strand=Plus/Plus
Query 33316 TGAACCGCACCGGGAATCGTGGAGGCTGGTTGGTTTAAGTTAATGCGGACACGTCAGCGG 33375
|||||| | ||||||||||||||||| ||||||||||||| | || ||| | |
Sbjct 33427 TGAACCACCCCGGGAATCGTGGAGGCCGGTTGGTTTAAGTCAG-GCCACCACCATGGAGA 33485
Query 33376 CATTTCTG---AGTTGTCTGTAGTAGTTTGCCTCAGCTTCAGCGGGCGGGATATAGCCGA 33432
| | ||| ||||| | |||||||||||||||||| || |||| |||||| |||||||
Sbjct 33486 CCTGACTGGCGAGTTGCCGGTAGTAGTTTGCCTCAGCCTCGGCGGACGGGATGTAGCCGA 33545
Query 33433 GCGGTTCCATCAGCCGATGATGGTTGTACCAGGCGACCCATTCCAGCGTTGCCAGTTCGA 33492
||||| | |||||| || |||||| |||| | |||||||| || || |||| || |
Sbjct 33546 TGGGTTCGAGCAGCCGGTGGTGGTTGAACCATGACACCCATTCGAGGGTGGCCAACTCCA 33605
Query 33493 CGGATTCCCTCGTTTTCCAAGGGGCGCGCCGATGAATCAGTTCCGTCTTGTACAGGCCGT 33552
| |||||| | || ||||| | || || || || |||| ||| | ||||||||| ||||
Sbjct 33606 CCGATTCCTT-GTCTTCCACGTTGCTCGTCGGTGGATCAATTCGGCCTTGTACAGCCCGT 33664
Query 33553 TGATCGTTTCGGCCAGCGCATTGTCGTAGCTGTCGCCCCGGCTGCCGACTGAGGGCTCGA 33612
||||||| ||||||||||| ||||| ||||||| |||| |||||| || ||||| ||||
Sbjct 33665 TGATCGTCTCGGCCAGCGCGTTGTCATAGCTGTTGCCCTTGCTGCCCACAGAGGGTTCGA 33724
Query 33613 TGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCCCCTGTCGG 33672
| |||||||| ||||| | || ||||||| || ||||| ||||| | |||||||||||
Sbjct 33725 TACCGGCCTCGGCCAGTCACTCTGTGTAGCGGATACTGACATATTGCG-CCCCCTGTCGG 33783
Query 33673 AATGATGAATCAAAGTCCCGTCCTCGCCC-GGTTGGCGGGCGTACAGCGCTTGTTCAAGT 33731
| ||| | ||| ||||| ||| | || | ||| ||||||||||| || || ||
Sbjct 33784 AGTGACAGACCAAGCCGCCGTCG-CGCTCAGGCTTGCGTGCGTACAGCGCCTGCTCCAGC 33842
Query 33732 GCATCCAGAACAAAGTCCGTGGTCATCGACGAGCTGACCCGCCAGCCAACAATACGGCGG 33791
| || || || |||||||| |||||| ||| ||||||||||| ||| | || |||
Sbjct 33843 GTATTGAGCACGAAGTCCGTACGCATCGAACTGCTCACCCGCCAGCCCACA-TGCGCCGG 33901
Query 33792 GCGAACACGTCGATCACGAATGCCACGTACAGCCAGCCTTGCCATGTCGAGACATACGTA 33851
||| || |||||||||| || ||||||||||||||||||||||| || || || || ||
Sbjct 33902 GCGCACGCGTCGATCACAAAGGCCACGTACAGCCAGCCTTGCCAGGTTGAAACGTAGGTG 33961
Query 33852 AAATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTTGAACTGCCGGTTGACTCGGTCC 33911
|| ||||| |||| ||||| || || || || || ||||| ||||||||||| ||||||
Sbjct 33962 AAGTCCGAGACCCTCAGCTGGTTGGGCCGCTCGGCTTTGAATTGCCGGTTGACCCGGTCC 34021
Query 33912 AGCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGAACACGCTTACCGCGAACTGCG 33971
||||||| ||| || | ||| | || || ||||| | ||| || || ||
Sbjct 34022 AGCGGGCACGGTGCCCGAGCGTCGCTGATGGTGGTGCGCTCCACCTTGCCACGGCGCACG 34081
Query 33972 CCACGCAAGCCCTGCAGCTTCATCAACCGTCCGACCGTGCAGCGTGCCACCGTAATGCCT 34031
|| ||||||| | || ||||| ||| |||| |||||||| || | || ||||||
Sbjct 34082 CCCTGCAAGCCAAGGCGCCGCATCAGCCGCTCGACTGTGCAGCGGGCAATGGTGATGCCT 34141
Query 34032 TCCCGGTTCATCTGCTTCCAGACCT--TCGGCACGCCGTAGACCTGCATGTTGGCCTGCC 34089
|| ||||| | ||| ||||||||| |||| |||||||||||||||||||||| ||||
Sbjct 34142 TCGCGGTTGAGCTGTCTCCAGACCTTGTCGG--CGCCGTAGACCTGCATGTTGGCGTGCC 34199
Query 34090 AGACACGCTTGATCTCCGGTTGCAAAAGCTCATCGCGTTTCGCGCGGGCGCAGCGTTTCG 34149
| || || | || | ||| || | || || |||| ||||| | |||||| |
Sbjct 34200 ACACGCGTTCCATGTGCGGCACCAGATTGTCGTCACGTTGGGCGCGCGTGCAGCGCAGCT 34259
Query 34150 ACGGATCGCGAAGTTGTGCTGCATGGCGTCGGTAGCCCGACGGGGCAATCCGCAAGACCT 34209
||| |||| | || || |||||||| | ||||| ||| |||| ||| ||| || |
Sbjct 34260 GAGGACCGCGCTGATGAGCAGCATGGCGCCAATAGCCTGACAGGGCGATCTTCAACACTT 34319
Query 34210 TGCAGATCGGCTCGACCCCGAAGGTGTCGCGATGCTGATCAATGAAGGCCTTCAGGACTT 34269
||| |||| |||||||||| ||| | ||| ||||||| | || |||||||||
Sbjct 34320 CGCAAATCGACTCGACCCCGTAGGCCTGTCGACGCTGATCGACAAACTTGTTCAGGACTG 34379
Query 34270 GAAACGGCGGTCGAGCTCCGCCTGAGCGAAAAACGCGCTCGCCAGTTTGAGAA--TCTCG 34327
| |||||||||||| |||||||| ||||||| |||||| ||||| ||||| | ||||
Sbjct 34380 CAGACGGCGGTCGAGTTCCGCCTGGGCGAAAAGCGCGCTGGCCAGCTTGAGGATCTCTCA 34439
Query 34328 TTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGCGTTCACGCTCGGCC 34387
|||| | ||| || |||||||||| ||||| || || || ||| ||||||||
Sbjct 34440 TTGGCTTTGTGCACCTCTTTGACCTCGCACTCCAGCGCCTTCATCTGTTTACGCTCGGAT 34499
Query 34388 GTACTCACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTAACCCAATCCAACAGC 34447
|| | | ||| |||||||| | |||| || || ||||| ||| | || ||
Sbjct 34500 GTCGTGATGCCGTCGCGCTCGCTGGAATCGATCTGGTCTCGCTTGACCTATTCGTTGAGG 34559
Query 34448 GTCTGCGGCGTGCAGCCGATCATCGGCGCAATCGATTCGACGGCCGCCCACATCGACGGG 34507
||||| || ||||| |||||| || || || ||||||| ||| ||||||||| | |||
Sbjct 34560 GTCTGGGGAACGCAGCAGATCATGGGGGCGATGGATTCGATGGCGGCCCACATCAAGGGG 34619
Query 34508 TGCTCGCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTCTCGGACTTCCGGGGAAAAC 34567
| ||||| || |||||||| |||| ||| || || | ||||| || || || |||||
Sbjct 34620 TACTCGCCTCGGTGCTCGCGCACCAAGCGAACGGCTTGTTCTCGCACCTCGGGTGAAAAT 34679
Query 34568 TGCTT-GGCTTC-TGTTCATGGCTCCATTCTCTCAGAG-TTGGAGCCTCCAC-AAACTCG 34623
|| || | ||| || ||||||||| || ||||||| | ||||||| | |||| ||
Sbjct 34680 TGGTTCGAATTCTTGCTCATGGCTCTATCCTCTCAGGGAAAAGAGCCTCTTCAAAACCCG 34739
Query 34624 GGGCGGTTCA 34633
||||||||||
Sbjct 34740 GGGCGGTTCA 34749
>seq11405
Length=110570
Score = 297 bits (328), Expect = 7e-76
Identities = 551/797 (69%), Gaps = 74/797 (9%)
Strand=Plus/Plus
Query 31340 CCACTCGCCCCATTGCTTGAATAGGAACGGCACGCCGGCGGCTGCGCACTGGTCGCGCAG 31399
|||||||||||| |||||||| | ||| | | ||| |||| ||||||||||||||||
Sbjct 75263 CCACTCGCCCCACTGCTTGAACATGAAGGCCGTGCCCACGGCCTCGCACTGGTCGCGCAG 75322
Query 31400 CGAGCGAGCCCAGTCGGGATGCATCGGGCGGGCGCCGTGGCCGCTTTCGCCGCCGGCGAT 31459
| | ||||||||||||||||| || || || ||| ||||||| ||||||||| ||||
Sbjct 75323 GCTGAGCGCCCAGTCGGGATGCATGGGACGCGCACCGGGGCCGCTCTCGCCGCCGACGAT 75382
Query 31460 CACCCAATGTAGGCCGCCGTCGGCTGGCCGGCGTAGTTCGAGCTGGCGCTTGCCGCCGTG 31519
|||||| | || | || || | | | |||| ||||| | ||
Sbjct 75383 CACCCAGTCCAGTTC--------CT--CCAGAGCA-TTCG----------TGCCGTC-TG 75420
Query 31520 CGTACGAAAATTGCCGGTGGGCTCGCTGTAGATG--TGGAAGCGAAGGTCAACCGGCCCG 31577
|| | |||| || || | || | | | | | || ||| || |||||
Sbjct 75421 CG-----ATGTTGCTGG--GGTTGGC-GAACAAGCCTTCAAACGAC-----ACAGGCCCC 75467
Query 31578 AGCAAAGGCTCCATCGACAGGAAGCGCACGCGAGCGGGCACTGCG-AGCAGCTTCGGAAT 31636
|||| ||||||||||||| |||||||||| ||||| | |||| |||||||| ||||
Sbjct 75468 AGCAGGGGCTCCATCGACAAGAAGCGCACGGACGCGGGGA-TGCGGAGCAGCTTGAGAAT 75526
Query 31637 GTCGCGGTCGGCCTCGGCCTGATTCACGATCGTCGCGCCGAGCCAGACATGCGGCCACGG 31696
||| ||||||||||||||||| || || | |||||| || | |||||| | || |||
Sbjct 75527 GTCCCGGTCGGCCTCGGCCTGGTTGACAACCGTCGCACCCAACCAGACGTTCGCGGGCGG 75586
Query 31697 CCACTCACGCTCATCGCGCATGATGCTGCCGAGGACGCTGGAAATCATATCCCGCGCGTT 31756
| | ||| | | || ||| || | ||| | | ||||||
Sbjct 75587 GC---------CGTCGAGGAACATTTCGCCTAGCA---TGGCA---------CCCGCGTT 75625
Query 31757 TCCGATTCGCTTCGTCAGTAGCAGCCAGTCGAGATTTGGCGTGTTGCTGATCAAATCGAA 31816
|| || | || || || || |||||||| || | | |||| ||||| |
Sbjct 75626 CCCAATCCTTTTGGTGAGGAGGAGCCAGTCAAGGTCCGCGGTGTCCAGGATCAGGGCTGC 75685
Query 31817 GAGATCGACTCGCCA--CATCGGATAGACCGCGTTGTCGAACACGTCCGCAAGCGACGAG 31874
|| || | ||||| || ||| | ||| ||||| ||||| ||||| || || || |
Sbjct 75686 CAGGTCATCGCGCCATTCA-CGGCT-GACTGCGTTATCGAAAACGTCAGCGAGGCTCGCG 75743
Query 31875 CAAAAGACGCGCTGGCGCCGGCCGCGGGCGGCGAAGAACTGTTCGTGCGCTGCGTTCCAC 31934
|| || ||||||||||| |||||| | ||| ||| ||| | ||||||||
Sbjct 75744 CAGAACACGCGCTGGCGGCGGCCGTGCTGGGCCTGGAATGCCTCGGCCTGGGCGTTCCA- 75802
Query 31935 GCG-AGCGGCTTGCGCCAGTTTGCGGCTGAC----GTGCGACGCCGCGGTGCGCCCGGTC 31989
||| || ||| | |||||| |||||| ||||| || || |||||||| || |
Sbjct 75803 GCGCAGGGGCAGGTTCCAGTT----GCTGACACTGGTGCGGCGGCGGGGTGCGCCTGGGC 75858
Query 31990 CCCAGTTCACGGCCGAGCCGCCAGCGAAGCGTGCATTGCGCGCCTCGGCGTAACAGTGGT 32049
||||||| | ||| |||||| |||||||| |||||||| |||||| || |||||||
Sbjct 75859 CCCAGTTGATCGCCTGGCCGCCGGCGAAGCGGGCATTGCGGTTCTCGGCATAGCAGTGGT 75918
Query 32050 CGCATCCCGGACCGACCTTCTGGCAACCTTCCCACGGGTTGAACGTGTGGTCGCACCATT 32109
| || ||||| || ||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct 75919 CACAGCCCGGGCCCACCTTCTGGCAGCCTTCCCAGGGGTTGAACGTGTGGTCGGTCCATT 75978
Query 32110 CGATTTTGCTGTTCTCG 32126
|||| ||||||||||||
Sbjct 75979 CGATCTTGCTGTTCTCG 75995
>seq7642
Length=832695
Score = 251 bits (278), Expect = 2e-62
Identities = 562/820 (69%), Gaps = 33/820 (4%)
Strand=Plus/Plus
Query 33833 CCATGTCGAGACATACGTAAAATCCGACACCCAGAGCTGATTCGGT--CGGTCAGCCTTG 33890
||| |||| | | || || || || || ||||||||| | ||| ||| || | |
Sbjct 801192 CCAGGTCGCGCCGTAGGTGAAGTCGGAGACCCAGAGCATGTGCGGCGCCGGG--GCATGG 801249
Query 33891 AACTGCCGGTTGACTCGGTCCAGCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGA 33950
|| || |||||||| | || || |||| || |||| | ||| | | |||||||||
Sbjct 801250 AATTGGCGGTTGACCTGATCGAGAGGGCAAGGTGCGGCCTTGTCGCTCACCGTCGTGCGG 801309
Query 33951 ACACGCTTACCGCGAACTGCGCCACGCAAG-CCCTGCAGCTTCATCAACCGTCCGACCGT 34009
| |||| ||||||| ||| | |||| ||| | | |||||| || | || ||
Sbjct 801310 AGCGGCTTGCCGCGAATGATGCC-CTCAAGGCCCATGACCCTCATCAGGCGGGCAACGGT 801368
Query 34010 GCAGCGTGCCACCGTAATGCCTTCCCGGTTCATCTGCTTCCAGACCTTCGGCACGCCGTA 34069
||||| || || | ||| || || || || | ||||||||| | ||||||||
Sbjct 801369 ACAGCGGGCGACATCGAAGCCCTCGCGCCGCAACTACCGCCAGACCTTGCGAACGCCGTA 801428
Query 34070 GACCTGCATGTTGGCCTGCCAGACACGCTT--GATCTCCGGTTGCAAAAGCTCATCGCGT 34127
||| | | ||| |||| | |||||| | || ||| | |||| |||||| ||
Sbjct 801429 GACGCGGAAGTTCGCCT--CGAACACGCGTCGGACCTCATCCTTCAAAGCCTCATCCCGC 801486
Query 34128 TTCGCGCGGGCGCAGCGTTTCGACGGATCG-CGAAGTTGTGCTGCATGG-CGTCGGTAGC 34185
||||| || || | | || |||||| || ||| || |||| ||| |||||
Sbjct 801487 TTCGCCCGAGCCGATAGCCCAGAGGGATCGACGCGCTTG-GCGATATGGTCGT-GGTAGG 801544
Query 34186 CCGACGGGGCAATCCGCAAGACCTTGCAGATCGGCTCGACCCCGAAGGTGTCGCGATGCT 34245
|||||| || || |||| ||||||||||||||||||||||| | ||||| || |
Sbjct 801545 TCGACGGAGCGATTTGCAACACCTTGCAGATCGGCTCGACCCCATGCGCCTCGCGGTGAT 801604
Query 34246 GATCAATGAAGGCCTTCAGGACTTGAAACGGCGGTCGAGCTCCGCCTGAGCGAAAAACGC 34305
|||||||| || ||| || ||| |||||||||||||||||||| || ||| |||
Sbjct 801605 CGTCAATGAACGCGATCATCGCTCGAACCGGCGGTCGAGCTCCGCCTGGGCAAAATGCGC 801664
Query 34306 GCTCGCCAGTTTG---AGAATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAA 34362
||||||| ||| || ||||||||| | | || || || | ||||||||||||
Sbjct 801665 GCTCGCC---TTGCGCAGGATCTCGTTGTCCTGCCGAAGCTCGCGGTTCTCGCGCTCCAA 801721
Query 34363 GGCTTTGATGCGTTCACG-CTCGGCCGTACTCACGCCATCGCGCTCTCCACGGTCGACCT 34421
|| || | || | || | | ||||| ||| || | ||| | | |||||| ||
Sbjct 801722 AGCCTTCA-GCTTCGTCGCCACATCCGTAGGCACACCGGCACGCACAC--CGGTCGCGCT 801778
Query 34422 CGTTGCGCTTAACCCAATCCAACAGCGTCTGCGGCGTGCAGCCGATCATCGGCGCAATCG 34481
|| ||| ||||| || ||||||||||| ||||||||||||| | | || || |
Sbjct 801779 CGGCCTTCTTCACCCACTCATGCAGCGTCTGCGCCGTGCAGCCGATCTTGGCGGCGATTG 801838
Query 34482 ATTCGACGGCCGCCCACATCGACGGGTGCTCG-CTACGCTGCTCGCGTACCAGGCGCACT 34540
| || ||||||||| ||| | |||||| || || || || | ||||| || ||
Sbjct 801839 ACGAAACCGCCGCCCACCGCGAGGCATGCTCGCCTTCG-TGATCTAGAACCAGCCGAACC 801897
Query 34541 GCGCGCTCTCGGACTTCCGGGGAAAACTGCTTGG----CTT-CTGTTCATGGCTCCATTC 34595
| ||| |||||| || || || |||| |||| ||| || |||||||||||
Sbjct 801898 GTGCGGGTTCGGACCTCGGGAGAGAACTTGTTGGTCGTCTTGCTTGTCATGGCTCCACCT 801957
Query 34596 TCTCA-GAGTTGGAGCCTCC-ACAAACTCGGGGCGGTTCA 34633
||||| |||||| ||||||| ||||| ||| ||||||||
Sbjct 801958 TCTCAGGAGTTGAAGCCTCCGGCAAACCCGGCGCGGTTCA 801997
Score = 206 bits (228), Expect = 9e-49
Identities = 271/371 (73%), Gaps = 12/371 (3%)
Strand=Plus/Plus
Query 33313 GACTGAACCGCACCGGGAATCGTGGAGGCTGGTTGGTTTAAGTTAATGCGGACACGTCAG 33372
||||||||||| |||| | ||||| || || |||| ||||| || | || | | |
Sbjct 800757 GACTGAACCGCCCCGGTTTTGTCGGAGGTTGTTTCGTTTGAGTTAC-GCCGCCATGGCTG 800815
Query 33373 CGGCATTTCTGAGTTGTCTGTAGTAGTTTGCCTCAGCTTCAGCGGGCGGGATATAGCCGA 33432
|| ||| | || | |||| | | |||| |||| || |||||||| | || ||
Sbjct 800816 --GCTCTTCCGGCCTGGCA-TAGTGGCGTCCCTCGGCTTTGGCCGGCGGGATGTTGCGGA 800872
Query 33433 GCGGTTCCATCAGCCGATGATGGTTGTACCAGGCGACCCATTCCAGCGTTGCCAGTTCGA 33492
|| |||| |||||| ||| |||| ||||| | ||||||||||||||||| | ||||
Sbjct 800873 TGGGCTCCAGCAGCCGGCGATTGTTGAACCAGTCTACCCATTCCAGCGTTGCGAACTCGA 800932
Query 33493 CGGATTCCCTCGTTTT----CCAAGGGGCGCGCCGATGAATCAGTTCCGTCTTGTACAGG 33548
||| ||||| | ||| || |||| || || |||| || | |||||| ||
Sbjct 800933 CGG----CCTCGAATGAGCGCCATGGCCCGCGTCGGTGGATCACCTCGGCCTTGTAGAGA 800988
Query 33549 CCGTTGATCGTTTCGGCCAGCGCATTGTCGTAGCTGTCGCCCCGGCTGCCGACTGAGGGC 33608
|||||||| |||||||| || |||||||||||||||||||| |||||| || ||||||
Sbjct 800989 CCGTTGATGGTTTCGGCGAGAGCATTGTCGTAGCTGTCGCCGACGCTGCCCACAGAGGGC 801048
Query 33609 TCGATGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCCCCTG 33668
|||| ||| ||||| ||||| || ||| |||| |||||||||| |||||| || ||
Sbjct 801049 TCGACGCCAGCCTCCGCCAGGCGCTCGGTGTATCGAATGCTGATGTATTGGCTGCCTCTA 801108
Query 33669 TCGGAATGATG 33679
||| ||||||
Sbjct 801109 TCGCTATGATG 801119
Score = 91.5 bits (100), Expect = 5e-14
Identities = 222/326 (68%), Gaps = 13/326 (4%)
Strand=Plus/Plus
Query 34319 AGAATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGA--TGCGTT 34376
|| ||||||||| | | || ||||| | |||||||||||| || |||| | |||
Sbjct 807385 AGGATCTCGTTGACCTGACGGAGTTCGCGGTTCTCGCGCTCCAAAGCCTTGAGTTTCGT- 807443
Query 34377 CACGCTCGGCCGTACTCACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTAACCC 34436
| | | | |||| |||||| | || | | || ||| |||| ||| ||||
Sbjct 807444 CGC-CACATCCGTCAGCACGCCGACTCGAACGCGACTTTCGCGCTCGGCCTTCTTCACCC 807502
Query 34437 AATCCAACAGCGTCTGCGGCGTGCAGCCGATCATCGGCGCAATCGATTCGACGGCCGCCC 34496
| || |||||| ||| ||||||||||| | | | ||| |||||| | | |||||||
Sbjct 807503 ACTCATGCAGCGTTTGCACCGTGCAGCCGACCTTGGCCGCGATCGATGAGGCCGCCGCCC 807562
Query 34497 ACATCGACGGGTGCTCG-CTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTCTCGGACT 34555
| | | | ||||| | || || || || | ||| || || ||||| | || ||
Sbjct 807563 ATCGCAAGGTGTGCTTGCCTTCG-TGATCCAGCGCCATCCGAACCGCGCGGTTGCGAACC 807621
Query 34556 TCCGGGGAAAACTGCTTGG----CTT-CTGTTCATGGCTCCATTCTCTCA-GAGTTGGAG 34609
|| ||||| || | |||| ||| || ||||||||| | ||||| |||||||||
Sbjct 807622 TCGGGGGAGAATTTGTTGGTCGTCTTGCTTGTCATGGCTCAACCTTCTCAGGAGTTGGAG 807681
Query 34610 CCTCC-ACAAACTCGGGGCGGTTCAG 34634
||||| | ||| ||| |||||||||
Sbjct 807682 CCTCCGATCAACCCGGCGCGGTTCAG 807707
>seq14366
Length=84928
Score = 163 bits (180), Expect = 1e-35
Identities = 250/353 (71%), Gaps = 4/353 (1%)
Strand=Plus/Minus
Query 33312 GGACTGAACCGCACCGGGAATCGTGGAGGCTGGTTGGTTTAAGTTAATGCGGACACGTCA 33371
|| ||||||||||||||| | |||||| ||||||| ||||| ||||| || | |
Sbjct 53740 GGTCTGAACCGCACCGGGTTTGCCGGAGGCCATTTGGTTTGAGTTA-TGCGGCCATGGCT 53682
Query 33372 GCGGCATTTCTGAGTTGTCTGTAGTAGTTTGCCTCAGCTTCAGCGGGCGGGATATAGCCG 33431
| | | | || | ||||||| | ||||| || || ||||| || | ||||
Sbjct 53681 GGTTCGTCCAGCA--TGGC-GTAGTAGCGCTCTTCAGCCTCGGCTGGCGGTATGTTGCCG 53625
Query 33432 AGCGGTTCCATCAGCCGATGATGGTTGTACCAGGCGACCCATTCCAGCGTTGCCAGTTCG 33491
| || |||| | || | ||||| ||||| |||||||||| ||||| || | ||
Sbjct 53624 ATAGGCTCCAGAAAGCGTCGGTGGTTAAACCAGTCGACCCATTCGAGCGTGGCGAACTCA 53565
Query 33492 ACGGATTCCCTCGTTTTCCAAGGGGCGCGCCGATGAATCAGTTCCGTCTTGTACAGGCCG 33551
|||| ||| | ||| || | || ||||| || | || | |||||| || |||
Sbjct 53564 ACGGCTTCGAAGCTGCGCCACGGTCCTCGGCGATGGATGACCTCGGCCTTGTAAAGACCG 53505
Query 33552 TTGATCGTTTCGGCCAGCGCATTGTCGTAGCTGTCGCCCCGGCTGCCGACTGAGGGCTCG 33611
||||||||||| || || |||||||| || |||||||| ||| ||||| || ||||||
Sbjct 53504 TTGATCGTTTCAGCGAGAGCATTGTCATAACTGTCGCCGACGCTTCCGACAGACGGCTCG 53445
Query 33612 ATGCCGGCCTCAGCCAGCCGTTCGCTGTAGCGAATGCTGACGTATTGAGACCC 33664
||||| ||||| ||||||||||| ||||||||| || ||||| || ||
Sbjct 53444 ATGCCCGCCTCTGCCAGCCGTTCAGAATAGCGAATGGACACATATTGCGAGCC 53392
>seq11894
Length=11267
Score = 105 bits (116), Expect = 2e-18
Identities = 199/293 (68%), Gaps = 0/293 (0%)
Strand=Plus/Plus
Query 33789 CGGGCGAACACGTCGATCACGAATGCCACGTACAGCCAGCCTTGCCATGTCGAGACATAC 33848
||||| || | ||||||||||| |||||||| | |||| ||||| |||| ||||||
Sbjct 2 CGGGCAAAGGCATCGATCACGAAGGCCACGTAAACGAAGCCCTGCCAGGTCGCGACATAG 61
Query 33849 GTAAAATCCGACACCCAGAGCTGATTCGGTCGGTCAGCCTTGAACTGCCGGTTGACTCGG 33908
|| ||||| || | ||| ||| ||||| | ||||||||| || || ||||| |||
Sbjct 62 GTGAAATCGGATAACCACAGCATGTTCGGCGCGGGAGCCTTGAAGTGGCGATTGACGCGG 121
Query 33909 TCCAGCGGGCGCGGCGCGGTCACATCGGTAATCGTCGTGCGAACACGCTTACCGCGAACT 33968
|| ||||| | ||| || | | || | | || || | |||| || ||||
Sbjct 122 TCGAGCGGACACGGGGCAGACTTGTCCGATACAGTGGTTTTGATCGGCTTGCCACGAATG 181
Query 33969 GCGCCACGCAAGCCCTGCAGCTTCATCAACCGTCCGACCGTGCAGCGTGCCACCGTAATG 34028
||| | | ||| || |||| | || | |||| |||||||| || | | |
Sbjct 182 ATGCCTTGAAGACCCATCATTCTCATGAGCCTTGCGACGGTGCAGCGAGCGATATCGAAG 241
Query 34029 CCTTCCCGGTTCATCTGCTTCCAGACCTTCGGCACGCCGTAGACCTGCATGTT 34081
||||| || | || ||| ||| || ||| ||||||| |||||||| | |||
Sbjct 242 CCTTCTCGCTGCAACTGTCGCCACACTTTCCGCACGCCATAGACCTGGAAGTT 294
Score = 82.4 bits (90), Expect = 3e-11
Identities = 223/329 (68%), Gaps = 23/329 (7%)
Strand=Plus/Plus
Query 34321 AATCTCGTTGGTCCGGCGCAGTTCCTTGACCTCGCGCTCCAAGGCTTTGATGCGTTCACG 34380
||||||||||| | | || || || | ||| ||||||| || || || |||
Sbjct 1680 AATCTCGTTGGCCTGACGAAGCTCGCGGTTCTCCCGCTCCAGAGCCTTCATC--TTC--- 1734
Query 34381 CTCGGC--CGT-ACTC---ACGCCATCGCGCTCTCCACGGTCGACCTCGTTGCGCTTAAC 34434
||||| ||| |||| | |||| | |||| || | ||| ||||| ||| ||
Sbjct 1735 -TCGGCGACGTCACTCGGCAGGCCAGCTCGCTTGCCGCTGTCCACCTCAGCCTTCTTCAC 1793
Query 34435 CCAATCCAACAGCGTCTGCGGCGTGCAGCCGATCATCGGCGCAATCGATTCGACGGCCGC 34494
||| || ||||| |||| || |||||||||| | | || || || ||||||||
Sbjct 1794 CCATTCATTGAGCGTATGCGCCGAGCAGCCGATCTTGGCAGCTATGGAAGACACGGCCGC 1853
Query 34495 CCACATCGACGGGTGCTC-GCTACGCTGCTCGCGTACCAGGCGCACTGCGCGCTCTCGGA 34553
|||| ||| || ||||| ||| | |||||| |||| || || ||||| | || |
Sbjct 1854 CCACCGCGAAGGATGCTCTGCTTC-ATGCTCGACAACCATTCGAACGGCGCGGGCGCGCA 1912
Query 34554 CTTCCGGGGAAAACTGCTT----GGCTT-CTGTTCATGGCTCC--ATTCTCTCAGAGTTG 34606
|||| || ||||||| || | ||| || |||| | || ||||| || |||||
Sbjct 1913 CTTCGGGAGAAAACTTGTTCGTCGTCTTGCTTGTCATAGACCCTACTTCTCACA-AGTTG 1971
Query 34607 GAGCCTCC-ACAAACTCGGGGCGGTTCAG 34634
| | |||| ||||| ||| |||||||||
Sbjct 1972 GGGTCTCCGGCAAACCCGGTGCGGTTCAG 2000
>seq11041
Length=50943
Score = 86.0 bits (94), Expect = 2e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 44426 GCCGGGCGACGTCGTGTTCGATCCGTTCTTCGGCAGCGGCACGACCGGACAAGTAGCGCA 44485
|||||||||||||||| |||| |||||||||||| |||||| || || | || |
Sbjct 14688 GCCGGGCGACGTCGTGCTCGACCCGTTCTTCGGCGTCGGCACCACGGGCGCGGCCGCCAA 14629
Query 44486 GCGCCTCGGCCGCCGTTTCATCGGCTGCGAACTCAACCCGGACTATG 44532
|||||| |||||||| ||||||||| ||| | | | | |||||||
Sbjct 14628 GCGCCTGGGCCGCCGGTTCATCGGCATCGAGCGCGAGACCGACTATG 14582
>seq10795
Length=12376
Score = 82.4 bits (90), Expect = 3e-11
Identities = 166/241 (69%), Gaps = 8/241 (3%)
Strand=Plus/Minus
Query 16647 CCGCGAAGGCGGTGCGCGCGCTGTCGGTGCTGATTCCGGGCTTCCGCGCGTTCCTGACGT 16706
|||| |||| |||||||| |||| |||||| | |||||||||| || ||| | |
Sbjct 7144 CCGCTGAGGCCGTGCGCGCTCTGTGCGTGCTGCTGCCGGGCTTCCAGCAGTACCTCATG- 7086
Query 16707 CGGCGCGCGACGGC---GGCCTCACGTTCGCCGTGTTCAACGGCCGGCGCAATCTCGGCG 16763
||||| | | | | ||| | ||||||||||||| ||| |||| || || |
Sbjct 7085 -GGCGC-CAAGGCCAAGGGCATGGAGTTCGCCGTGTTCGTCGGGCGGCAGAACCTGACCA 7028
Query 16764 AGGACGAGCTCGAGCATCCGGTGGGGCGC-GACGAGATTCGCATTGCTCCGGTAATCGTC 16822
|||| |||| | |||| | ||||| ||||| ||||| || |||||||| | ||
Sbjct 7027 AGGAACAGCTGCACGATCC-GCCCGGCGCTGACGACATTCGGATCGCTCCGGTGCTGGTG 6969
Query 16823 GGCAGCAAGCGCGGCGGGCTCTTCAACACGATTCTCGGCGCCGCACTCGTCGCTGTCGGC 16882
|| |||||||| || || | | || ||||||||| || ||| ||| ||||||
Sbjct 6968 GGTTCGAAGCGCGGAGGCGTCCTGCAGACAATTCTCGGCATCGTGCTCATCGTGGTCGGC 6909
Query 16883 G 16883
|
Sbjct 6908 G 6908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 170641479472930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |