Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq8995 414 1e-110 seq7420 214 2e-50 seq6289 192 8e-44 seq13960 140 4e-28 seq7661 120 4e-22 seq608 102 1e-16 seq11415 87.8 2e-12 >seq8995 Length=8301158 Score = 414 bits (458), Expect = 1e-110 Identities = 626/890 (70%), Gaps = 3/890 (0%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||| ||||||||| | || | || | || | || || || || ||||| || || Sbjct 6971359 GACATCACTCCCATTCTCTGATTCTCGCTTACTCTCTTCTCAAAGAAGTTAGTCTTCCCC 6971418 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || | ||| ||||||||||| || || || ||||| || || ||| || |||| Sbjct 6971419 TCCAGTGAAATATTTTCCATAAAGTCAAACGGATTTTCTACTTTGAAAACCTTGCTAAAG 6971478 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 |||| || || | ||||||||| || || || || || ||||||| ||| Sbjct 6971479 CCCAGCTCCAGCATAAGTCTATCTGCCACGAACTCGATGTACTGCTTCATCAAAGTGCAA 6971538 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || || || || || || || ||| | ||||| || || ||||| || || Sbjct 6971539 TTCATCCCAATGAGCTTCACAGGCAGGGCCTCCGTAAGGAACTCCTGTTCTATCCTAACT 6971598 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 || | || || ||||| | | || ||| | ||| | ||||| ||| Sbjct 6971599 GCATTGACGATTATTTCCTTTACTCTCTGTTTCGAAGGTTTGTGCAACAGGTGTTTGAAC 6971658 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 |||| || | || || ||||| | |||||| ||||| ||||| | ||| ||||||||| Sbjct 6971659 ATCAGGCAGGTAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAAC 6971718 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271 ||||| || ||||| || || || || || ||||| ||||| |||||||| || || ||| Sbjct 6971719 GTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATAGACGCAAAAGAACCGGAA 6971778 Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTG 36328 ||||| || ||||| ||||| |||||||| | | | |||||||| | | | || Sbjct 6971779 AAGAAGATGCCTTCCACTGCAGCAAAGGCTACCACACGTTCTCCATATGTAGCTTCTTTG 6971838 Query 36329 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 || |||| |||||||| |||||||| || ||||||||||| ||||| || Sbjct 6971839 TCCCCAGTCCAGCGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATCGTCTCAATG 6971898 Query 36389 GCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTA 36448 ||||| |||||| | | |||| || |||||||| || || ||||| | |||||| Sbjct 6971899 GCATTGAAGAGAAATTCCCTTTCTTTGGAATCTTTAATGTAAGTGTCAATGAGGAGACTA 6971958 Query 36449 TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCG 36508 |||||||| ||||| |||||||| ||||| ||||| || || |||||||| ||||||| Sbjct 6971959 TACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAAGGAGCCTCG 6972018 Query 36509 GTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTG 36568 |||||||| |||||| | ||| || || | || |||||||| ||||| || ||||| Sbjct 6972019 GTAATCTGAACTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTTACTATGCCATCACTT 6972078 Query 36569 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATTC 36628 |||||||| || |||| ||||| ||||||||| | || | || | || | | Sbjct 6972079 GCTGCAAAGAAAGCCAGCACATGGGAAATAAAATATCTCTCCTCAGGCTTCAGGGCTTCC 6972138 Query 36629 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 36688 || | | || || || || | ||||| || || |||||||||| || ||||| || Sbjct 6972139 CAGTGCTGAATGTCCTTGGAAAGGTCCACCTCCTCAGCTGTCCAAAAGGAAGCCTCAGCT 6972198 Query 36689 TTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 || |||||||| | ||| || ||||| |||| || ||||| || ||||| Sbjct 6972199 TTCTTATACATCTGCCAAATATCATGGTATTCGATAGGAAAGATGACAAA 6972248 Score = 228 bits (252), Expect = 1e-54 Identities = 382/552 (69%), Gaps = 3/552 (1%) Strand=Plus/Plus Query 35852 GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCT 35911 ||||| ||||||||| | || || || || || | || || || || ||||| || || Sbjct 6968491 GACATCACTCCCATTCTCTGATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCC 6968550 Query 35912 TCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAAT 35971 || | ||| ||||||||||| || || || ||||| || || ||| || |||| Sbjct 6968551 TCCAGTGAAATATTTTCCATAAAGTCAAACGGATTTTCTACTTTGAAAACCTTGCTAAAG 6968610 Query 35972 CCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAA 36031 |||| || || | ||||||||| || || || || || ||||||| ||| Sbjct 6968611 CCCAGCTCCAGCATAAGTCTATCTGCCACGAACTCGATGTACTGCTTCATCAAAGTGCAA 6968670 Query 36032 TTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACC 36091 ||||| || || || || || || || ||| | ||||| || || ||||| || || Sbjct 6968671 TTCATCCCAATGAGCTTCACAGGCAGGGCCTCCGTAAGGAACTCCTGTTCTATCCTAACT 6968730 Query 36092 GCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAAC 36151 || | || || ||||| | | || ||| | ||| | ||||| ||| Sbjct 6968731 GCATTGACGATTATTTCCTTTACTCTCTGTTTCGAAGGTTTGTGCAACAGGTGTTTGAAC 6968790 Query 36152 ATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAAC 36211 |||| || | || || ||||| | |||||| ||||| ||||| | ||| ||||||||| Sbjct 6968791 ATCAGGCAGGTAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAAC 6968850 Query 36212 GTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAA 36271 ||||| || ||||| || || || || || ||||| ||||| |||||||| || || ||| Sbjct 6968851 GTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATAGACGCAAAAGAACCGGAA 6968910 Query 36272 AAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTG 36328 ||||| || ||||| ||||| |||||||| | | | |||||||| | | | || Sbjct 6968911 AAGAAGATGCCTTCCACTGCAGCAAAGGCTACCACACGTTCTCCATATGTAGCTTCTTTG 6968970 Query 36329 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATA 36388 || |||| |||||||| |||||||| || ||||||||||| ||||| || Sbjct 6968971 TCCCCAGTCCAGCGCAAGGCCCAATCTGCCTTCTTCTTCACACAAGGCATCGTCTCAATG 6969030 Query 36389 GCATTAAAGAGA 36400 ||||| |||||| Sbjct 6969031 GCATTGAAGAGA 6969042 >seq7420 Length=6353595 Score = 214 bits (236), Expect = 2e-50 Identities = 237/316 (75%), Gaps = 0/316 (0%) Strand=Plus/Minus Query 9392 AGCAGACAGGACCAGCTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAA 9451 || || || |||||||| ||| ||||||| | ||| ||| |||| | ||||||||| Sbjct 5209290 AGAAGCCACGACCAGCTGCACAGTTTCACCATAACAAAACATCTTCAAGATTCCTGACAA 5209231 Query 9452 AATTAAAATCCACAAAGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGA 9511 | |||||||||||| | ||| | |||||||||| ||| | | | |||||||| || Sbjct 5209230 GAACAAAATCCACAAACCAGAAAATAGGCCTGCTCCAAATTTGCCGCAGTCTCTCTTAGA 5209171 Query 9512 TTGTAGAGTATATGCAGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGCTTGCAT 9571 ||| |||| ||| |||| | || |||| | |||| |||||||| ||| |||||| Sbjct 5209170 TTGCAGAGCATACACAGTTGAATCAGGAAATAGTGCATGGGTCAGCATAAAATCTTGCAG 5209111 Query 9572 AACGACATGCACATCATAGAAAGTAACAACAGAGGCCAGCGTTAGAGATTCCGACAGTGT 9631 || | || ||||||| |||||||||||| |||||| || || | |||| ||||| | Sbjct 5209110 GACAATATACACATCACAGAAAGTAACAATGAAGGCCACAGTCAGCGCTTCCAACAGTAT 5209051 Query 9632 AAATCCACAAAGCAGGTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAA 9691 |||| || ||||||||||| || |||||||| |||||||||| |||||||| | || Sbjct 5209050 AAATACAAAAAGCAGGTATGGGTTAAGGGGATGCTTATGTCTGTTTAAAGTCATGTCTAA 5208991 Query 9692 AATCAAGCCTATAGAT 9707 ||||| || | |||| Sbjct 5208990 AATCAGACCAAAAGAT 5208975 Score = 122 bits (134), Expect = 1e-22 Identities = 131/171 (77%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 9229 ATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCA 9288 |||| ||||| | ||||||||| || || || || || || || |||| |||||||| Sbjct 5209685 ATTTTCTATTAATTGCTTCCAAAATTTGCAA-AGGTGTAA-AAGAGGTTGAGGATATCCA 5209628 Query 9289 AGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGT 9348 |||| | |||||| ||||| ||||| || ||||| || ||| ||| || ||||||| Sbjct 5209627 AGTAAAGGCTGATAGCAGCTAATACATATTCCTCAGGTGACAGCCTATACATCAGTGAGT 5209568 Query 9349 GCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACA 9399 ||||||||||| ||||||| |||||| | |||||| || | ||||| || Sbjct 5209567 ATGTGTCATAGATGATGAATCTGCAGAAAAGAAGGGCTCCTACAGCAGCCA 5209517 >seq6289 Length=465196 Score = 192 bits (212), Expect = 8e-44 Identities = 157/191 (82%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 9231 TTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATCCAAG 9290 || |||||| | ||||||||| | ||||||| |||||||| |||||||||||||||||| Sbjct 267217 TTTTTATTAACTGCTTCCAAAACCCGTAACAGGTGCAAGAAGAGATTGATGATATCCAAG 267158 Query 9291 TAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGAGTGC 9350 |||| ||||| | ||||| ||||| |||||||| || ||| | || || |||||||| Sbjct 267157 TAGAGGTTGATGGCAGCTAATACATACTCTTCAGGTGACAGCCTGTGCATCAGTGAGTGT 267098 Query 9351 GTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAGCTCC 9410 ||||||||||| |||||||| ||||| | || ||| || ||||| || |||||||||| Sbjct 267097 GTGTCATAGATGATGAATCCACAGAAAAGAATGGCTCCCCCAGCAGCCAAGACCAGCTCC 267038 Query 9411 ACTGTTTCACT 9421 ||||| ||||| Sbjct 267037 ACTGTCTCACT 267027 Score = 143 bits (158), Expect = 4e-29 Identities = 103/119 (87%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||||| ||| |||||||||||||| || |||| ||||||| |||||| | ||||| Sbjct 264255 CCTGCTCCAAATTTGCTGAAATCTCTCTTAGACTGTAAAGTATATACAGTCAAACCAAGA 264196 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || |||||| |||||| ||||||||||||| ||| |||| |||||||||||| ||||| Sbjct 264195 AATACTGCACAAGTCAGTATGAAAGCTTGCAGAACAACATACACATCATAGAAGGTAAC 264137 Score = 104 bits (114), Expect = 3e-17 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| ||||||||||||||||||||||||||| Sbjct 252647 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCAGCTGCCATAGTTGAAGTCGTCCTCGA 252588 Query 9907 TGGAGGAGCACGCGTAGAGG 9926 |||||||||| | |||| || Sbjct 252587 TGGAGGAGCAGGGGTAGCGG 252568 >seq13960 Length=3940437 Score = 140 bits (154), Expect = 4e-28 Identities = 113/137 (82%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| |||||||| || ||||||||||| ||||| | Sbjct 2049915 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTGTAGATGTTACTGGTATAAGGTTCAATG 2049974 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||||||||| || ||||||||||| ||||| ||||| || || | | |||| Sbjct 2049975 GACTCATTATTTCCCAATATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 2050034 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 2050035 CTGTTTCTTATACCATA 2050051 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| |||| ||| || ||||||||||| | || || ||||| || || || || | | Sbjct 2074044 CACTGAATACTTTCTTGGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTTGCTGCCAGGA 2074103 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 |||||||||| || || | ||||| | || || ||| | || || |||| ||| |||| Sbjct 2074104 TGGCATAATCAGGGTGCTTAGTAGTCAAGGTTGCGGCTGTCTCAGCAGCCAAAGTATCCA 2074163 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| || || || || ||| | |||| |||||||| || ||||| Sbjct 2074164 GTTCCACAGTAGTGACCCCACTGTATAAGCCTTGGATTACTTTCAT 2074209 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || ||||| || | || || || | ||||| || || || || || || | Sbjct 2054701 CATAGGTTTCATATGGGCCATACTCCTTGGCCAAGTCACAGCTGGCTTCCAAGGCTCCAT 2054760 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||||||||| ||||||| |||||| | || || || | || ||||| || | Sbjct 2054761 AATAAATGGTTTCAAAGATCTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGGT 2054820 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | | |||||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 2054821 ACCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGGC 2054880 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 2054881 GTTTATTCGA 2054890 >seq7661 Length=1898141 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 36180 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 36239 |||| ||||| ||||| | ||| |||||||||||||| || ||||| || || || || | Sbjct 818599 CCTCATCTCTGCTAATAAGTTCATTGGAAAACGTGAGGCCAGGCATCAGTCCTCGTTTCT 818540 Query 36240 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 36299 | ||||| ||||| |||||||| || || |||||||| || ||||| ||||| ||||||| Sbjct 818539 TGAGCCAGAATATAGACGCAAAAGAACCGGAAAAGAAGATGCCTTCCACTGCAGCAAAGG 818480 Query 36300 C 36300 | Sbjct 818479 C 818479 Score = 114 bits (126), Expect = 2e-20 Identities = 89/106 (84%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||||| ||| || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 816929 ATCTTTAATATAAGTGTCAATGAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 816870 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCT 36523 ||||| || || |||||||| ||||||||||||||| |||||| Sbjct 816869 AATTTGGAAGCCATAGAAACAAGGAGCCTCGGTAATCTGAACTTCT 816824 >seq608 Length=3558542 Score = 102 bits (112), Expect = 1e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 36182 TCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 36241 || ||||| || || | || |||||||| |||||||| ||||| || || | || || Sbjct 2088600 TCATCTCTGCTGATGAGCTCATTGGAAAAAGTGAGTCCAGGCATGAGTCCTCTTTTCTTT 2088541 Query 36242 AGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 36300 ||||| ||||| | ||||| ||||| || ||||||||||||||||| || |||||||| Sbjct 2088540 AGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAATTCCTTCTACAGCAGCAAAGGC 2088482 >seq11415 Length=1221423 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/200 (70%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 33952 ACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCCCCC 34011 ||||| | | |||||| ||| |||| ||| | | || ||||| || |||| ||| ||| Sbjct 353737 ACTTCCTCTATTTCTGGGTAAAATATCCGTGCACAAATGAGCTGTGCAATTCGATCACCC 353678 Query 34012 GTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCCTATATTTCCCCTA 34071 | || || | || | ||| ||| ||||| || | || || | |||||| ||| Sbjct 353677 TTTTTGACTTCCAACTTCTCTTTGCCAAAATTAAACAGGACAACACCAACATTTCCTCTA 353618 Query 34072 TAATCTTCGTCTATTACACCGCCTCCTATATCAATACCTTTTAGGGACAGACCAGACCTA 34131 |||||||| ||||| ||||| |||||| ||| || | || | || ||||| | | Sbjct 353617 TAATCTTCATCTATGACACCAGCTCCTACATCTATGAC-GTTGCTGCCAAGCCAGAACGA 353559 Query 34132 GGAGCTATTCTACCATAGCA 34151 ||||| | ||| |||||||| Sbjct 353558 GGAGCCACTCTTCCATAGCA 353539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658048907197560