Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_004683.1 Length=57050 Score E Sequences producing significant alignments: (Bits) Value seq11405 118 4e-22 >seq11405 Length=110570 Score = 118 bits (130), Expect = 4e-22 Identities = 109/138 (79%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 48612 CTGCACTGGGTGATCGTCGGCGGCGAGAGCGGACCTGGTGCCCGGCCGATGCACCCCGAC 48671 ||| |||||||||||||||||||||||||||| || ||||| || || ||||| |||||| Sbjct 75394 CTGGACTGGGTGATCGTCGGCGGCGAGAGCGGCCCCGGTGCGCGTCCCATGCATCCCGAC 75335 Query 48672 TGGGCCCGCGGACTCCGCGACCAATGCACGGCGGCCGGTGTGCCGTTCCTGTTCAAGCAG 48731 ||||| | | | || |||||||| ||| ||| | || | | ||| ||||||||||| Sbjct 75334 TGGGCGCTCAGCCTGCGCGACCAGTGCGAGGCCGTGGGCACGGCCTTCATGTTCAAGCAG 75275 Query 48732 TGGGGTCAATACCGACCA 48749 ||||| | | |||||| Sbjct 75274 TGGGGCGAGTGGCGACCA 75257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182405775339096