Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq9587 389 2e-103 seq10635 221 5e-53 seq2892 91.5 6e-14 seq13715 89.7 2e-13 seq11465 87.8 7e-13 seq9803 87.8 7e-13 >seq9587 Length=50143 Score = 389 bits (430), Expect = 2e-103 Identities = 660/943 (70%), Gaps = 40/943 (4%) Strand=Plus/Minus Query 25252 TGCCCTTCCGCCCGAACCGCGCGCAACGCCGGCTCCTGCGCCGCCTCTGGCACCGCAACC 25311 |||||||||| || || |||||||| || || | |||| ||||||||||||||| Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357 Query 25312 TGATCCTGAAGGCCCGCCAGCTCGGCTTTACGACCCTCATCTGCATCATCTGGCTCGACC 25371 | ||||||||||| || ||||| ||||| || ||||| ||| |||| | ||||| |||| Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297 Query 25372 ACGCGCTGTTCAACGCCAA-CAGCCGGTGCGGCATCATCGCGCAGGATCGGGAGACGGCC 25430 | ||||||||||| || | |||| | ||||||||||||||||| ||||| || | ||| Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238 Query 25431 GAGGCGCTGTTTCGGGACAAGGTAAAGTTCGCCTACGACAACCTGCCCGAGGCGCTNNNN 25490 ||||| | || ||||||||||| |||| ||||||||| ||||||||||||| | | Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCG- 14179 Query 25491 NNNNNNATGCCGCT--CGCCAACTGCACGA-AG-GCCG---AGCTGTTGTTCGCCCACAN 25543 | ||||| | || || ||| || |||| ||||| |||||||||||| Sbjct 14178 ------AGACCGCTTCCCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAA 14125 Query 25544 NNNNNNNNNNNTCCGCGTCGCGACGTCCGTGCGCGGCGGCACGATCCACCGCCTGCACAT 25603 | ||||| || |||||| |||| ||||||||||| || || ||| | Sbjct 14124 CAACAGCAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGT 14065 Query 25604 CTCCGAGTTCGGGAAAATCTGCGCCAAG-TACCCGGACAAGGCGGCCGAAGTGGTGACGG 25662 |||||| | || || |||| || || | | |||| | ||||| || ||| |||| | Sbjct 14064 CTCCGAACTGGGCAAGATCT-CGGCACGCTTCCCGCATAAGGCCAAGGAGGTGATGACCG 14006 Query 25663 GCTCCATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCC 25722 ||||||| ||||||||||| | | ||||| ||||| |||||| |||||||||||| Sbjct 14005 GCTCCATTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCG 13946 Query 25723 GCGAGGGCGAGTTCTACAACATCACGATGCAGGCCGAGGCGATCGCGC-AGGCCGGCAAG 25781 | | |||||||||||| || | | || ||||||||| | || | | | |||| Sbjct 13945 CCAACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGCCCT-GCACTACACGCACAAG 13887 Query 25782 CCGCTCACGGCCCGCGACTACCGATTCCACTTCTTCCCGTGGTGGCAGGCGCCCGAGTAC 25841 ||| | | |||||||| || |||||||||| | |||||||||||| |||| | ||| Sbjct 13886 AAGCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTAC 13827 Query 25842 CGGATGGACTCGGCCCACGTCATCATCAC---CGAGAAGGACCGGCAGTATTTCGAGACG 25898 || |||||| ||| || ||| || | |||| || || | |||||||| | Sbjct 13826 CGCATGGACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCAC---GACTATTTCGACCAG 13770 Query 25899 ATCGAG---GCGAAGCACGGCATCACGATCGATGCCGAGCAGCGCGCATGGTACGTCGCC 25955 ||||| | || ||| | ||| |||||| || ||||| || ||||| || ||| Sbjct 13769 GTCGAGGTCGAGATGCAGTG---CACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCC 13713 Query 25956 ACGCGCGACGCCGACTTTTCCGGCAACGAGGAACGTATGTGGCAGGAATACCCGTCGACG 26015 || | || || ||||| |||| || || ||||||||||| ||||| || ||| Sbjct 13712 ACCCAGGAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACG 13653 Query 26016 CCCGACGAACCGTTCAAGGTTTCGACCGAGGGCACGTACTACGCCCAGCAGCTCGCCGCG 26075 || | ||| | ||| || || | || |||| |||||||||| || | | ||| Sbjct 13652 CCGGCCGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAGGCCATGGTTGCG 13593 Query 26076 -GCGCGCAAGCAGGGGCGCATCAAGCCGTCCCTGCCTGTCCTGTTCAACGTGCCGTGCTT 26134 | || |||| || |||||| | || |||| | ||| | ||||| || Sbjct 13592 CTCACG-AAGCGCGGCGGCATCA---CCTCGGTGCCCGAGCTG---GATCTGCCGGTCTA 13540 Query 26135 CACCTTCTGGGACATCGGCAACAGCGACGGCACGGCAATCTGG 26177 ||| |||||||| ||||| | ||||| ||||| |||||| Sbjct 13539 CACATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGG 13497 >seq10635 Length=172665 Score = 221 bits (244), Expect = 5e-53 Identities = 671/1015 (66%), Gaps = 49/1015 (5%) Strand=Plus/Plus Query 54377 AGGACGTCATCGACGCGCTCGGCACCTCGATCTACGAGGACCCGGCGAAGGGCT---GGC 54433 ||||||| |||| || |||||||| | | |||| | || ||| || | |||| ||| Sbjct 169892 AGGACGTGATCGCCGAGCTCGGCAGCGCCATCTTCCGCGATCCGTCGGACGGCTCCTGGC 169951 Query 54434 AGACGTCCGACGCGTACCTGTCGGGCAACGTCGTGCGCAA-GCTCGCGGAGGCGCAGGCC 54492 ||| ||||||| || || || ||| ||| || ||| ||||| | ||| ||||| Sbjct 169952 AGAGCGCCGACGCCTATCTCTCCGGCGCGGTCC-GCTCAAAGCTCGTCGCGGCCGAGGCC 170010 Query 54493 GCCGCGCGCGC-CGACCGGAAGTATCAGCGCAACGTCGAGGCGCTGCTCGCGGTGCAGCC 54551 || | || | ||| | || ||||||| |||| |||||||| || |||||||| Sbjct 170011 GCGGTA-GCTCTCGATCCAGCCTACGAGCGCAATGTCGCGGCGCTGCGCGATGTGCAGCC 170069 Query 54552 GAAGCCG--CTGGGCCCGACCGACATCACGGTGAAGCTGGGCCAGAATTGGATTCCGGCC 54609 |||| || | || | |||||||||| | ||| ||| | |||||||||||| Sbjct 170070 C--GCCGATCTCAGGCCCTCGGACATCACGGCGCGGCTCGGCGCGCCGTGGATTCCGGCC 170127 Query 54610 AGCGACGTCGCCGCGTTCGCGAGCGAGGCGCTGAACGAGAAGATCGACGTCAGCTACAAC 54669 |||| || ||| |||| | ||| || || || | | ||| | || | ||| Sbjct 170128 GACGACATCATCGCCTTCGTCAAGGAGACGATGGGCGCGGACATCAAGATCCACCACATG 170187 Query 54670 TCGCGGCTCGGCTCGTGGTCCGCCGAG------CAGTCCGGCTCGAACTATTCGG--AAT 54721 || || | ||||||| | | |||| ||| ||||| || | | | | Sbjct 170188 CCGGAACTGGCCTCGTGGACGGTCGAGGCCCGCCAGCTCGGCTGGATCGCCGCAGGCACG 170247 Query 54722 TCAA------CACCCCGAAGATGAACGCCGGCCAGATTCTCGACGCGGTGCTGAA--CAA 54773 || |||| | | | ||||||||||| ||||| || | ||| || | Sbjct 170248 TCCGGTGGGGCACCGAGCGGCGGCACGCCGGCCAGCTTCTCTCCGACGCGCTCAATTCGT 170307 Query 54774 CCGC----CAGATCAAGGTCACGTTCC------GCGATCAGGAAGGGAAAACGCA-CGTC 54822 ||| |||||| | |||| || |||| ||| || | ||| | || Sbjct 170308 CCGTGCCGCAGATCTTCGACACGATCAAAGACGGCGA-CAGCGAGCGC---CGCGTCCTC 170363 Query 54823 GACGCCGAGGCGACCGAGAAGGCCAACGACGTCGC-GCAGAAGATGCGCGCGGCGTTT-A 54880 ||| || | |||||| ||| || || | || ||||||||| | ||||| | Sbjct 170364 AACGTCGTCGACACCGAGGCGGCGAAAGA-GAAGCTGCAGAAGATCAAGACCGCGTTCCA 170422 Query 54881 GCCGATGGATTTGGACCGACACGCAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGA 54940 | | ||||| ||||||||| | | ||| |||| ||||| | || || || Sbjct 170423 GACC-TGGATCTGGACCGACCCCGATCGCACCGATCGGCTGGGGCGGGTGTATAAAGACC 170481 Query 54941 ACTTC-AACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTG 54999 |||| |||||||||| ||||||| |||||||||||||| |||| ||||||||||| Sbjct 170482 CCTTCTAACAACATCGTGCCGCGCGCCTTCGACGGCTCGCATCTGAAGCTGCCGGGCGCA 170541 Query 55000 TCGCTGCGC-TTCAACCTGCGCGAAAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGA 55058 || | |||| ||| || ||| |||||||||||| |||||||||| ||| | Sbjct 170542 TC-CGGCGCCTTCGTGCTCTACGATCACCAGAAGCGCGGCATCTGGCGCATCATCGCCGC 170600 Query 55059 AGGCGACATGTACCTCGCGCACGCGGTCGGCGCGGGCAAGACGTTCACGATGATCGCGAC 55118 |||| | |||||||| ||||| |||||||| ||||| || | |||||| || | Sbjct 170601 GGGCGCGACCTACCTCGCCCACGCCGTCGGCGCCGGCAAAACCATGACGATGGCGGCCGC 170660 Query 55119 GGGCATGGAGGAGCGCCGGCTGGGCCTCTCCAACAAGCCGATGTACGTGGTGCCGAACCA 55178 ||||||| |||||||||| ||||| | |||| ||||| |||||||| || Sbjct 170661 CATCATGGAGCAGCGCCGGCTTGGCCTGATCGCCAAGGCGATGCTTGTGGTGCCCGGTCA 170720 Query 55179 CATGCTCGCGCAGTTCGCACGCGAATTCCTCGAGCTCTACCCGGCCGCGAACATCATGGT 55238 || |||||| ||| |||||||| || | |||||| ||| ||| |||| | || Sbjct 170721 TTGCCTGGCGCAGGCCGCGCGCGAATTTCTGGCGCTCTATCCGAACGCCCGCATCCTCGT 170780 Query 55239 CGCGGACGAGCAGAATTTCCACACGCACAACCGCCGTCGCTTCGTCGCGCAGGCCGCGCT 55298 ||| |||||| || ||| || | |||| || | |||||| | ||| ||| ||| Sbjct 170781 CGCCGACGAGACCAACTTCAGCAAGGACAAGCGGCAGCGCTTCTTATCGCGGGCGGCGAC 170840 Query 55299 CAACAATCCGGATGCGGTCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATG 55353 | | ||| ||| ||||||||||||||||||| ||| || ||||||| || Sbjct 170841 CGCGACCTGGGACGCGATCATCATCACGCACTCGGCCTTCCGCTTCATCGGCGTG 170895 Score = 199 bits (220), Expect = 2e-46 Identities = 921/1416 (65%), Gaps = 73/1416 (5%) Strand=Plus/Plus Query 55536 GGAGCTGGGCGTCGACCGTCTGTTCGTCGACGAATTCCACGAGTTCCGCAAACTCGACTT 55595 |||| | |||||||||| | |||||||||| || || |||||||| || ||| Sbjct 171072 GGAGATCGGCGTCGACCAGATCATCGTCGACGAGGCGCAGGAATTCCGCAAGCTGTCCTT 171131 Query 55596 CGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATGGA 55655 ||| ||| | | | | |||||| |||| || |||||||||||| || ||| Sbjct 171132 CGCCACGAATATGTCGACGCTGAAGGGCGTCGATCCCAACGGCTCGCAGCGTGCCTGGGA 171191 Query 55656 CCTGTTCATGAAGGTCCAATACCTGCGCAGC-AAGAAGCCGGGCCGCGCGCTCGTGGCCG 55714 ||| | ||||| || || | | || | | ||||| || ||||||||||||||| | Sbjct 171192 CCTCTATGTGAAGTCCCGATTCAT-CGAAACGAAGAATCCCGGCCGCGCGCTCGTGCTGG 171250 Query 55715 CGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCGCAACGCT---TCT 55771 |||| ||||||||| |||| |||||| | |||||| | || | | ||| |||| || Sbjct 171251 CGTCTGGCACGCCGATCACCAACACGCTCGGCGAGATGTATTCGGTGCAGCGCTATCTCG 171310 Query 55772 TCCAGCCCGAGCAGCTTGCAGAGGATGGTCTGGATACGTTCGACGCGTGGGC--CAACCA 55829 | | ||| | | || ||| || || | ||||||||| ||||| ||||| Sbjct 171311 GCTACGCCGCCCTCC--GC-GAGCGGGGCTTGCACGAGTTCGACGCCTGGGCCTCAACC- 171366 Query 55830 GTACGGCGACATCGTTG--CGGGCTTCGAGCAGAACGCCGCCGGCGGCTACGAGGTCGTG 55887 | ||||||| || | | || || |||||| | || ||||| | ||| || || Sbjct 171367 -TTCGGCGACGTC-TCGACCGAGC-TCGAGCTTCAGCCCTCCGGCAGATACAAGCCGGTC 171423 Query 55888 AGCCGCTTCGCGAAGTTCCAGAACGTGCCCGAGCTGATGCGCCGCG-TGCGCTCGTTCAT 55946 | |||||||||| ||| || || ||||||||||| |||| | | || || ||| Sbjct 171424 ACGCGCTTCGCGACCTTCGTCAATGTCCCCGAGCTGAT-CGCCATGTTCCGGTCCTTCGC 171482 Query 55947 GGACATCCTGACGAGCCAACAGCTCGCGCAG-TACGTCGACCGTCCGGCGATCGAGGGCG 56005 ||| | | | | || | | |||| | ||||| | |||||||||| | || Sbjct 171483 CGACGTGGTCATG-GCGGAGGACCTGCGCCGATACGTGAAGATTCCGGCGATCTCGACCG 171541 Query 56006 GCGGCCGTCAGATCATGGTCACGCCGGAGC---CGTTCGGCTACAAGGCATACCAGAAGG 56062 || || ||||||||| ||| || ||| || || || |||| |||||| Sbjct 171542 GCAAGCGCCAGATCATG---ACGGCGAAGCCGACGGCCGCCTTCAAGCGTTACCAGGTCC 171598 Query 56063 CGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGCCCGCCGCAGAAGGGGCAGG 56122 |||||| |||||||| |||||| | ||| | | |||||| || || | | Sbjct 171599 AGCTCGATGCGCGCATCAAGGCGATCGAGATGCGCGACCGTCCGCCGGAGCCAGGCGACG 171658 Query 56123 ACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCGGCGATCGACATGCGTTTCGTCG 56182 ||||| | || ||| ||| | |||||||| | ||||||||| | || | |||| Sbjct 171659 ACATCCTGCTCTCCGTCATCACCGACGGCCGCCATGCCGCGATCGACCTTCGCCTTGTCG 171718 Query 56183 A-CCCGACCGCGCCGAGCGACCCGAACAGCAAGCTGAACCAGATGATCGACGCCGTGATC 56241 | || ||| | ||| ||| || ||| ||||||||||| |||||||| || || | Sbjct 171719 ATCCGGACAATGACGA-CGAGGCGGACAACAAGCTGAACCTGATGATCG--GCAATG--C 171773 Query 56242 GCCGACTACCATGCGG----CATCCGACTAC----CAGTACACGACGAACGGCAAGGTCG 56293 || | | | |||| | ||||| || || | | || |||||||| | Sbjct 171774 GCTGCGCATCTGGCGGGAAACGGCCGACAACGCCTATGTGCGTGCCG-ACGGCAAGCCCT 171832 Query 56294 ACCCGATCAAGGGCGCGTCGCACATCATCTTCACGGACATCGGGCTCGGCGAGCAGTCGG 56353 | | | ||||| |||| || |||||| | || ||||| | | || || Sbjct 171833 ATGAGCTGCCCGGCGCCGCGCAGATGATCTTCTCCGATCTCGGGACC--ATTTCCGT-GG 171889 Query 56354 CGAAGAACCGCGGCT--TCGACATGAAGGCGTGGATC-GAAAAGCGTCTGGTCGAGGGCG 56410 ||||| |||||||| ||| | | | || |||||| | | | | ||| || | Sbjct 171890 AGAAGAGCCGCGGCTTCTCGGCCT-ATCGC-TGGATCAGGGACGAG-CTGATCCGCATGG 171946 Query 56411 GCGTGCCCCGCGAGC-AGATCGCGTTCATGCGCGACAACAAGGAGCACGCGAAGAAAGAG 56469 ||||| || ||| | ||||||| ||||||| ||| ||||| || | | ||| || Sbjct 171947 GCGTG-CCGGCGTCCGAGATCGCCTTCATGCAGGACTACAAGAAGTCGGAGGCGAAGCAG 172005 Query 56470 CGTCTTTTCGCCGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---C 56526 || || |||| |||| |||||| ||||| ||| | ||||||||| | || Sbjct 172006 CGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTCCTGATCGGCTCCTCCGATACG 172065 Query 56527 ATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACAGCG-AGGAGCATCTGGACGCGCC 56585 |||| ||||||||||||| |||| ||||| | ||| | | || || |||| ||| Sbjct 172066 ATGGGCACCGGCGTCAACGCGCAGCTCCGCCT-GAAGGCGCTGCATCACCTCGACGTGCC 172124 Query 56586 GTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGGCGCATCATCCGCCAGGGCAACCAGAA 56645 ||| |||| | ||| |||||||||||||| ||| ||||||||||| ||| | Sbjct 172125 CTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGATCGAGCGCCAGGGCAATCAGCA 172184 Query 56646 CAAGCAGGTGCGCATCCGCGCGTGGGCGA-CGAAGGGCAGCTACGACTCGACCATGTGGG 56704 | | | | || ||| | |||| |||||| || |||| | || |||||| Sbjct 172185 CGACGTCATCGACGTCTTCGCCTATGCGACCGAAGGCTCACT-CGACGCCACGATGTGGC 172243 Query 56705 GGATGAACGCCCGCAAGGCTCGCTTCATCGAACAGGCCCTCAACGGCGACGACAGCG-TG 56763 || || | |||||||| |||||||||| || || |||||| || || | Sbjct 172244 AGAACAATGAGCGCAAGGCACGCTTCATCGCGGCCGCGCTTTCGGGCGAC-ACCTCGATC 172302 Query 56764 CGCTCGCTGGAGGACGTGTCCGAGGCGTCGGC------GTTCGACATGGCCGCCGCGCTG 56817 ||| ||||||||| | ||| | ||| ||||| ||||| ||| | Sbjct 172303 CGCCGTCTGGAGGACCTCGGCGAAGGCCAGGCCAACCAGTTCGCGATGGCGAAGGCGATC 172362 Query 56818 GCGTCGGGCGACGAGCGCTACATGAAGCT---GGCCGGCCTGAAGGCCGACGTCGAGCGG 56874 || ||||||||| |||| ||| ||| ||||| || | |||||| ||| |||| Sbjct 172363 GCATCGGGCGACCAGCG---TCTGATGCTCAAAGCCGGGCTCGAAGCCGACATCGCGCGG 172419 Query 56875 CTGGAGCGCCTGAGCTACGCGCACCACGACGACCAG 56910 || || || || || |||||| |||||| ||| Sbjct 172420 CTCGAACGGCTCCGCGCCGCGCATATCGACGATCAG 172455 >seq2892 Length=791 Score = 91.5 bits (100), Expect = 6e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 32234 AACAACCCGATCTTCAAGGGCGGCCTCGGCATGATCAACAACGTCGTGCTGCACAAGCAT 32293 || ||||||||||||| ||||| | ||| | |||| ||||| | ||||||||||| Sbjct 436 AAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTGCACAAGCAC 377 Query 32294 CGCAACGTGATCCGCTTCAACGATTACGGCGCGGGCGCGAACGTC 32338 ||||||||||| |||||| ||| ||||| || ||||| ||| || Sbjct 376 CGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332 >seq13715 Length=7744 Score = 89.7 bits (98), Expect = 2e-13 Identities = 144/199 (72%), Gaps = 11/199 (6%) Strand=Plus/Plus Query 50864 TGGAGCGC-TTCGCGCCGGAGACGGGCACGCTCGGCATCCCGCGCGCAGAAATGCCGCAG 50922 |||||||| || || || | |||||| || || ||| | |||||||| | ||||||||| Sbjct 902 TGGAGCGCCTTTGCCCCTGTGACGGGTACCCTGGGCGTGCCGCGCGCTCAGATGCCGCAG 961 Query 50923 GTGCCGACGCA----ATCGCACGGCGCGCTCGTCAATCACCTGAACGCGCAGGGCATCGA 50978 | ||| ||| ||||| || || || |||||| |||||| |||| ||||||||| Sbjct 962 AT-CCG-CGCTGAGCATCGC--GGTGCCCTGGTCAATTTCCTGAAGGCGCGGGGCATCGA 1017 Query 50979 GCACGAAACGA-AGATGGTGCCGGCCGCCGAGCTGAAGCCGACGCAGGCCGAGTTCTCGC 51037 | | || ||| | |||| || | ||| || || ||||||||||| || ||||||| Sbjct 1018 CAGCAAGGCGGCAGA-GATGCCAGCTGGCGACCTAAAACCGACGCAGGCGGAATTCTCGC 1076 Query 51038 CGGAGAAGGTCGAGCAGGC 51056 | | |||||||| || Sbjct 1077 CCGCCCGTGTCGAGCAAGC 1095 >seq11465 Length=2819 Score = 87.8 bits (96), Expect = 7e-13 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 25555 TCCGCGTCGCGACGTCCGTGCGCGGCGGCACGATCCACCGCCTGCACATCTCCGAGTTCG 25614 |||||||| |||| || ||||| ||||||| | || ||||||| ||||||| | || Sbjct 2483 TCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTGCAGTACCTGCACGTCTCCGAATACG 2424 Query 25615 GGAAAATCTGCGCCAAGTACCCGGACAAGGCGGCCGAAGTG 25655 | || ||||||||||| || |||||||||||| ||| ||| Sbjct 2423 GCAAGATCTGCGCCAAATATCCGGACAAGGCGCGCGAGGTG 2383 >seq9803 Length=69196 Score = 87.8 bits (96), Expect = 7e-13 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 10130 GGAGGGAATAATGGCAAGCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCC 10189 |||| | ||||||||| || || |||||||||||||| || || |||||| |||||| Sbjct 17446 GGAGTGCATAATGGCATCAGTCAATAAGGTAATTTTGGTAGGTAATTTAGGGCGCGATCC 17505 Query 10190 TGAAGTCCGTTACCTGCCGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGA 10249 ||||| |||||| |||| | || || ||||| || ||| | || | || || ||||| Sbjct 17506 GGAAGTGCGTTACATGCCCAATGGTGAGGCGGTGGCTAACTTTAGTATTGCCACTACCGA 17565 Query 10250 T 10250 | Sbjct 17566 T 17566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 204260104942257