Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_005337.1
Length=134431
Score E
Sequences producing significant alignments: (Bits) Value
seq7355 114 1e-20
>seq7355
Length=5246521
Score = 114 bits (126), Expect = 1e-20
Identities = 111/143 (78%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230
|| |||||||| |||| || ||||| ||||| ||||| || ||||| |||||||||||
Sbjct 5156479 GGTTGCCAAGCCTTGTCGGAAATGATCCAGTTTTACCTGGAGGAGGTGATGCCACAGGCT 5156538
Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290
|| || || || || ||||| || || ||||| || || ||||| || |||||||||||
Sbjct 5156539 GAGAACCATGGGCCTGACATCAAGGAGCACGTGAACTCGCTGGGGGAGAAGCTGAAGACC 5156598
Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313
| | || || ||||| |||||
Sbjct 5156599 CTCCGGCTGCGGCTGCGGCGCTG 5156621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429975471444008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |