Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_005344.1
Length=39043
Score E
Sequences producing significant alignments: (Bits) Value
seq7041 93.3 1e-14
>seq7041
Length=191181
Score = 93.3 bits (102), Expect = 1e-14
Identities = 121/165 (73%), Gaps = 3/165 (2%)
Strand=Plus/Minus
Query 38309 CCATTGAAGTTGC-TCACTTTCTGCGTACTGGTGCTGAAGAATGGCTTCACCGTCACCGG 38367
||||||| |||| | || ||||||| || || ||| |||| || ||||| || || ||
Sbjct 27065 CCATTGA--TTGCCTGACGGTCTGCGTTCTCGTCCTGCAGAACGGTTTCACGGTGACTGG 27008
Query 38368 AGAGAGTGCCTGTGCAAGCCCGGAAAACTTTGATGCAGAAATTGGCCGGAAGATTGCCCG 38427
||||| ||||| || |||||||||||||| ||||| || || || | || |||||
Sbjct 27007 CGAGAGCGCCTGCGCCAGCCCGGAAAACTTCGATGCCAGGATCGGGCGCGATATCGCCCG 26948
Query 38428 GCAAAATGCTGTAAACAAAATCTGGATGCTCGAAGGTTACTTGCT 38472
|||||| ||||| |||||| ||| || || ||| ||||
Sbjct 26947 CGCGAATGCTCGCAACAAGATCTGGCAGCTTGAGGGATACCTGCT 26903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 124793679700790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |