Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq13887 100 3e-16
>seq13887
Length=3975994
Score = 100 bits (110), Expect = 3e-16
Identities = 145/202 (72%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 164500 TTAGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACA 164559
|||||||| |||||| | ||||| || | ||| |||| ||||| ||||||||||| ||
Sbjct 2240719 TTAGGCTGCAAACATGTTAAAGGCATCCTGTTATATGGGCCTCCAGGTTGCGGTAAGACT 2240660
Query 164560 TTAATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAAT 164616
| |||||||| |||| |||| | || ||| | || || |||| | || ||
Sbjct 2240659 CTGTTGGCTCGACAGATTG-GCAAGATGTTGAATGCAAGAGAGCC--TAAAGTGGTCAAC 2240603
Query 164617 GGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTT 164676
|| || ||| | | ||||||||||| || |||||||| ||||| || | || | |||
Sbjct 2240602 GGGCCGGAAATTCTCAACAAATATGTGGGAGAGTCAGAGGCTAACATTCGTAAACTCTTT 2240543
Query 164677 CAGGAGGCTGAAGAAGAACAAA 164698
|| |||||||| || ||||
Sbjct 2240542 GCTGATGCTGAAGAGGAGCAAA 2240521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595759834544400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |