Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq12839 91.5 2e-13 >seq12839 Length=204338 Score = 91.5 bits (100), Expect = 2e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 156931 ATTGATATTGTTGCAGTAAACTTATATCCTTTCGCAGAAACAGTTGCTAAACCAGATGTA 156990 || ||| |||||| |||||| | |||||||| || | || |||||||||||||| Sbjct 64276 ATCGATCTTGTTGTCGTAAACCTTTATCCTTTTGCTGCTACTGTTGCTAAACCAGACTGC 64217 Query 156991 ACTCTTGCAGATGCAATAGAGAATATTGATATTGGTGGTCCTAGTATGGTGAGATCAGCA 157050 | |||||||||||||| || |||||||| |||||||| || | ||||| | |||| Sbjct 64216 TCACTTGCAGATGCAATTGAAAATATTGACATTGGTGGCCCAACAATGGTTCGTGCAGCT 64157 Query 157051 GCAAAGAA 157058 || || || Sbjct 64156 GCGAAAAA 64149 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807403187828040