Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_007145.2
Length=37639
Score E
Sequences producing significant alignments: (Bits) Value
seq7272 385 1e-102
seq5906 84.2 5e-12
seq9683 80.6 6e-11
>seq7272
Length=98981
Score = 385 bits (426), Expect = 1e-102
Identities = 682/980 (70%), Gaps = 32/980 (3%)
Strand=Plus/Plus
Query 2887 GCCCGTCGAGCGCATCGAGGCATCGCTCGAAGTGCGCATGATGGTGTTGATCGCGAAGGA 2946
|||||| ||||| |||||| |||||| ||| ||||| || | | ||| |||||
Sbjct 40776 GCCCGTGGAGCGTGTCGAGGGATCGCTGGAAATGCGCCTGTGCACGCTCATCAACAAGGA 40835
Query 2947 GAAGAAGGACGGTGCGGACTACAAGGAAATCGACCTGCTCGGCCG--CCAAGTCGAGCGG 3004
| |||| | | |||||||||||||||||| ||| || || ||| | |||||
Sbjct 40836 GGGCAAGGGCAACGGCGACTACAAGGAAATCGACGCGCTGGGGCGTGCCATG--GAGCGC 40893
Query 3005 CTCGCGCGCGTGCGCAAGTACGACGAGACGGGGAAGGAATCGGATCTGAACCCGAAGATT 3064
| |||||||||| ||| ||||| ||||| |||||||||||||| |||| |||
Sbjct 40894 TTGGCGCGCGTGCACAAATACGAGCGCACGGGCCGAGAATCGGATCTGAATCCGACCATT 40953
Query 3065 GCGTCGCGCAACGCCGGCCCGAA-----ACGCCGTGCGC---CCCGTAACGAAATCAGCG 3116
| |||||| ||||| || || | ||| |||| | | | ||| || ||
Sbjct 40954 GAAAAGCGCAATGCCGGACCTAAGAAGCAGCCCGAGCGCAATCACTTCACG---TC--CG 41008
Query 3117 ACGAACAGCACAAGCGCATCATCGAAGCGTTCCGCGATTCGCTGTTCGACTATCAGAAAG 3176
| || | ||||| || || | || || | |||||||| ||| |||| || ||
Sbjct 41009 AGGACGTGGACAAGATCA-CACGG--GCATTTCTGGATTCGCTTTTCAACTACCAAAACA 41065
Query 3177 TCTGGTATCGGAACGG--CGATCAGCGCACGCGCAACATCCTGAAATCGCGGCAGATCGG 3234
|||| ||| | | | | |||||||||||| ||| || |||||||| ||||||||
Sbjct 41066 CATGGTG--GGAGCAGATCCAGCAGCGCACGCGCGCCATTCTCAAATCGCGCCAGATCGG 41123
Query 3235 TGCGACGTGGTACTTCGCGCGCGAGGCGCTCGTCGACGCCCTCGACACCGACCGTAATCA 3294
|| ||||||||||||| |||||||| || | || ||||| | || | ||| |||||
Sbjct 41124 GGCAACGTGGTACTTCGGCCGCGAGGCCCTGATTGATGCCCTGAAGACGGGCCGCAATCA 41183
Query 3295 AATCTTCCTGTCGGCGAGCAAGGCTCAGGCGCACGTCTTCAAGCAGTACATCA-CGCAGT 3353
|| || || ||||| ||| || ||||| || || ||| ||||||||||| ||| ||
Sbjct 41184 GATTTTTCTTTCGGCCAGCCGTGCGCAGGCCCATGTTTTCCGGCAGTACATCATCGC-GT 41242
Query 3354 TCGCGCGCGGGGCAGC-CGACATCGAGCTCACGGGCGATCCGATTATCTTGCCGAGCGGC 3412
| || | || ||| ||| ||||| | | |||||| || || || || | |||
Sbjct 41243 TTGC-CAAGGAGCATTGCGATATCGATTTGAAGGGCGACCCCATCGTCCTGAGCAATGGC 41301
Query 3413 GCGACGCTGTACTTCCTGGGCACGAACGCGCGCACCGCGCAGTCGTACCACGGCAACTTC 3472
|| |||||||| ||||||||||||| ||| |||||||||||||||||||||||||| ||
Sbjct 41302 GCCACGCTGTATTTCCTGGGCACGAGCGCCCGCACCGCGCAGTCGTACCACGGCAATCTC 41361
Query 3473 TACTTCGACGAATACTTTTGGGTTCCGAAGTTCCGCGAGCTGAACAAGGTCGCCTCCGGC 3532
|| ||||| |||| ||||||||| || ||| |||||| ||||| ||| |||
Sbjct 41362 TATTTCGATGAATTCTTTTGGGTCAACAACTTCACGGAGCTGTGGAAGGTGGCCAGCGGT 41421
Query 3533 ATGGCGATGCACAAGCGCTGGCGCAAGACGTACTTCAGCACGCCGTCCAGCGTCACGCAC 3592
||||| || ||||||| |||||||||||| || |||||| |||| | ||||
Sbjct 41422 ATGGCCATCCACAAGCATTGGCGCAAGACGCTGTTTTCCACGCCCAGCAGCCTGCAGCAC 41481
Query 3593 GAGGCGTACGCGTTCTGGAGCGGCGCGCACGCGAACCGCGGCCGCGCCGCGGGCGAGCGC 3652
|||| || ||| | ||||||| || | | ||| |||||| || |||
Sbjct 41482 CAGGCCTATGCGCTGTGGAGCGCCGAACGCATCAACAAGAAGCGCGCCAAAAAGGACCGC 41541
Query 3653 ATCCAGATCGACACGAGCCACGAGGCGCTCGTGCGCGGCATGTTGTGCGAGGACGCGCAG 3712
|| || | ||| |||||| | || | | ||| | |||||||| |
Sbjct 41542 ATAGAGCTGGACCTGAGCCATTCGCACCTGGCTGGAGGCTTCACCGGCGAGGACAAGATA 41601
Query 3713 TGGCGGCAGATCGTGACCGTGCTCGATGCGATGGCGGGCGGCTGCGACCTGTTCGACATC 3772
||||||||||| || || ||||| |||||| | ||||||||| | ||||||||| |
Sbjct 41602 TGGCGGCAGATTGTCACGGTGCTGGATGCGCAGCGCGGCGGCTGCAATCTGTTCGACCTT 41661
Query 3773 GACGAGCTGCGCCGCGAGTACAGCGCCGAGGAATTCGCGAATCTGCTCATGTGCCAGTTC 3832
||||| |||||| |||||| | |||||||| | || |||||||||||| |||
Sbjct 41662 GACGAACTGCGCTTCGAGTATTCGGACGAGGAATGGGACAACCTGCTCATGTGCGGGTTT 41721
Query 3833 ATCGACGA----TTCGCTGT 3848
|||| || ||||||||
Sbjct 41722 GTCGATGACACCTTCGCTGT 41741
Score = 275 bits (304), Expect = 2e-69
Identities = 630/929 (68%), Gaps = 42/929 (5%)
Strand=Plus/Plus
Query 4558 GCGCCGGCGCGTGCCGAGGTCTTCACGTTCGACGATCCGACGCCCGTCATGAACCGGGCC 4617
|||||||| |||||||| ||| | |||| |||||| | |||| || ||||| |
Sbjct 42420 GCGCCGGCCACTGCCGAGGCTTTCTCTTTCGGCGATCCCGAGGCCGTGCTGGACCGGCGC 42479
Query 4618 GAGATTCTCGATTACGTCGAGTGCTGGTCGAACGGCGAATGGTTCGAGCCGCCGGTCAGC 4677
|| || | |||||||| || |||||| || || || |||| ||| | || |||||
Sbjct 42480 GAAATCTTGGATTACGTGGAATGCTGGCTCAATGGGGATTGGTACGAAACCCCCATCAGC 42539
Query 4678 TTCGCCGGCCTGGCGAAATCGTTTCGCGCGAGCACGCACCATAGCTCG---GCGCTGTTC 4734
|||| || |||||| || | ||||| ||| ||||| || |||| | |
Sbjct 42540 TTCGATGGTCTGGCGCGCACGCTGCGCGCTGCCACCCACCA-----CGAAAGCGCCATCC 42594
Query 4735 --TTCAAGGCGAACGTGCTGGCGTCGACATTCCGCCCGCA-CCGCTGGCTGT--CGCGGC 4789
|||||||| | ||||| || || | ||||| || ||||| ||| |||| |
Sbjct 42595 AATTCAAGGCCCAGGTGCTCGCCAGCACGCTGCGCCCTCATCCGCTT-CTGAACCGCGCC 42653
Query 4790 ACGCGTTCGAGCGGTGGGC-GCTC--GATTTCCTGACGTTCGGCAACGGCTATCTGGAAC 4846
||| | || |||||| |||| || ||||| |||||||| ||||| | || |
Sbjct 42654 ACG-----GTGCAGTGGGCTGCTCTGGACTTCCTTGTTTTCGGCAATGGCTACTTTGAGC 42708
Query 4847 GCCGCCGCAACATGGTC--GGCGGCACGCTGCGGCTTGAGCC-CGCGCTCGCGAAGTACG 4903
||| ||||| | ||| || ||| | ||| || | ||| || || || ||||||
Sbjct 42709 GCCCGCGCAA--TCGTCTGGGTGGCTCATTGCCCCT-GCGCCACGTACTGGCCAAGTACA 42765
Query 4904 TCCGGCG-CAAGGCCGATTTCAACGGCTTCGTGTACGT-GAACGGCTGGCAGGAGCGGCA 4961
|||| || | | | ||| || || | || | || ||||||||| |||
Sbjct 42766 CAAGGCGGCATCGTGGTCTGAAACTCTTTGGTTTCCGCCGCAC--CTGGCAGGAAGAGCA 42823
Query 4962 CGAGTTCGAGCCCGA---CAGCGTGTTCCAGCTCGTGCGGCCGGACATCAATCAGGAGGT 5018
| ||| ||||| |||| | | ||| || | | ||| || | | ||||| |
Sbjct 42824 CACGTTT---CCCGAAGGCAGCATTTGCCACATCCTCCAGCCCGATGTGCACCAGGAAAT 42880
Query 5019 CTACGGCCTGCCCGAGTATCTGAGCTCGCTGCACTCGGCCTGGCTGAACGAATCGTCGAC 5078
||| || ||||| |||| ||| | ||||||| || |||||||| || || ||| | ||
Sbjct 42881 CTATGGACTGCCGCAGTACCTGGCCGCGCTGCAGTCCGCCTGGCTCAATGAGTCGGCCAC 42940
Query 5079 GCTGTTCCGGCGCAAGTATTACGAGAACGGCAGCCACGCCGGCTTCATCCTGTACATGAC 5138
|||||| |||||| ||||||| | || || ||||| ||||| | |||||| || |||
Sbjct 42941 GCTGTTTCGGCGCCGGTATTACAACAATGGGAGCCATGCCGGATACATCCTCTATCTGAG 43000
Query 5139 CGACGCCGCGCAGAAGCAG--GACGACGTGGACAACATGCGCGACGCGCTGAAGAACGCG 5196
||| ||| || ||| ||||| ||||| ||||| | || |||| |
Sbjct 43001 CGATCCCGA--AGTGGCAAAAGACGATGTGGATGCGCTGCGCCAGGCCTTGAAATCTTCC 43058
Query 5197 AAGGGGCCTGGCAACTTCCGCAACGTGTTCATGTACGCGCCGGGCGGGAAGAAGGACGGC 5256
||||| ||||| |||||||| |||| | | |||| ||||| || || | | |
Sbjct 43059 AAGGGCATGGGCAATTTCCGCAATCTGTTTTTCCATTCGCCCGGCGGCAAAGAGAAAGCC 43118
Query 5257 ATCCAGCTCATCCCCGTGTCCGAGGTCGCCGCGAAGGACGAGTTCTTCAACATCAAGAAC 5316
||||| || | ||| | ||||| || || ||||| || || |||||||||||||||
Sbjct 43119 ATCCAACTGCTGCCCATCGGCGAGGCGGCGGCCAAGGATGAATTTTTCAACATCAAGAAC 43178
Query 5317 GTGACGCGCGATGACCTGCTCGCCGCGCACCGCGTGCCGCCGCAGTTGCTTGGCATCGTG 5376
|||| |||||||||| | ||||| ||||||||||| |||||| | | ||| | |||
Sbjct 43179 GTGAGCCGCGATGACCAATTGGCCGCCCACCGCGTGCCTCCGCAGCTCATGGGCGTGGTG 43238
Query 5377 CCGAGCAATTCGGGCGGGTTCGGTACACCGGACACCGCCGCGCGCGTGTTCGGGCGCAAC 5436
||| |||| | || || ||||| || || ||| || || ||||||| |||||||
Sbjct 43239 CCGGCCAATGCAGGTGGCTTCGGCGATGTGGTCAACGCTGCACGGGTGTTCGCGCGCAAC 43298
Query 5437 GAAATCAGGCCGCTACAGGCGCGCTTCGC 5465
|||||| ||| || ||| ||||||||||
Sbjct 43299 GAAATCCAGCCCCTGCAGACGCGCTTCGC 43327
Score = 187 bits (206), Expect = 6e-43
Identities = 526/788 (67%), Gaps = 30/788 (4%)
Strand=Plus/Plus
Query 869 AGTAGATCGACAGATTTGACAGCTTCGTGACCATCAGCGCGCGCTTCGG-GAAGAACGGC 927
||||||| ||||| ||| ||| ||||| | ||| | | | ||| |||||| |||
Sbjct 38614 AGTAGATGGACAGGTTTTTCAGAGGCGTGATGAGCAGGCCAC-CGTCGATGAAGAAAGGC 38672
Query 928 ACGCGCACGGCC-GGCAGATTGCCGATGCGCTTCTGGCTCACGATCAGATCGGCCGCGAG 986
||| ||||||| ||| | ||| | |||| |||||||||| | || |||||||| ||
Sbjct 38673 ACGGTCACGGCCTGGCTGCC-GCCCAGGCGCATCTGGCTCACCACCATGTCGGCCGCCAG 38731
Query 987 CCGCTCGGTCGGCGCCTGCGTCGC-GTTGACGATCGGGAAATACTTGTCGTGCAGCAGCT 1045
|||||| | ||| | ||| | ||| ||||| ||||| |||||| |||| ||| |
Sbjct 38732 GCGCTCGCTGGGCAGAT-CGTTGTTGTTCACGATGGGGAACAGCTTGTCATGCATCAGGT 38790
Query 1046 CGCGGCCGCAGATCACGACGAGGCCCGTGT-CTTCCTGGAACCACGGGTCGATCATCGAC 1104
| || |||||| || || ||| || ||| | || ||||| || |||| |||
Sbjct 38791 CATCGCTGCAGATGGCGCGCAGATCCGGGTGCTTGC-GGTGCCACGAATCAATCAGCGAG 38849
Query 1105 GACACGATATCCATCACGAGCGCGTCGAGGTTCTCGTAATCGCCCGCCTTGCCGACGAGC 1164
| | |||||| | || ||||||||||||| ||| ||||| || || ||
Sbjct 38850 TGCTTGGCATCCATGGCCAGGGCGTCGAGGTTCTTGTAGTCGCCACCCGGTCCCACAGTG 38909
Query 1165 ACCTTGCCGGCCTGCTTCGCGCCTTCGTGCAGCACGCGCTGCGCTGCGCGCTCGCGGTAC 1224
|||||||| ||| ||| ||| || ||||||| | || |||||
Sbjct 38910 ACCTTGCCCGCCACCTT---GCCAGAAGACATGACGCGCTCGGGCGCCTCTTCGCGCAGG 38966
Query 1225 TGTTGCAGCCAGCCGATGTTCACGTCCTGCAACAGCGGGTTTGCCTGACGGTCGGTCGTC 1284
| |||||||| || || ||| ||||||| || ||||| || || ||| ||
Sbjct 38967 CGCTGCAGCCACCCCTTGGTCAGATCCTGCAGCAAAGGGTTGGCGGTCAAGTTGGTGGTG 39026
Query 1285 GC---GGCCGCCTTCACGCCGTTCCAGCCGATCATGATGCGATCGAGCGCCCCCTGGTTG 1341
|| ||| |||| ||||||||| || | ||||||||| || ||||| | | |
Sbjct 39027 GCCTTGGCTTCCTT---GCCGTTCCATCCCACCATGATGCGGTCCAGCGCATTGCGTTCG 39083
Query 1342 AGGATCACGTCGCGGATGCGCTGCTGGAAGTCGGCGAACTTCGCCCACATGTCGAGC-TT 1400
|||| ||||| ||| ||| ||| ||||||| ||| | |||||| |||||| |
Sbjct 39084 GCAATCAGGTCGCTGATACGCACCTGAAAGTCGGGGAAGTGCGCCCAGGCATCGAGCATC 39143
Query 1401 GCGATACGGAATCGCCGTGTCGTAGTCGGTCTTCTCGCAGCGGTAGCGGTTGCTGTCGAG 1460
||| ||| || || ||| | || ||| | |||| |||| | | | ||||
Sbjct 39144 GCG-TACTTGATGTGGGTATCGGAATCAATCTGCAGGCAGTGGTATCCGGTCTTGTCCTT 39202
Query 1461 CGCCGTCGGGTCGATCGGTTGGCGCGCGGCCTTC----GTCGTGTCGGTGCGGCTCGCGA 1516
| ||||| || | | | ||| | |||| || || ||||| |||||||| ||||
Sbjct 39203 GCCTGTCGGATCTTTGGTCTTGCG-GGGGCCGTCAGCGGTGGTGTCCGTGCGGCTGGCGA 39261
Query 1517 TCGGGCCGGACACGGACAGGCCGAGCTTTTCGCCTTCGAGCT-CGG--TCACGGGCAGCA 1573
|| | || || | ||| || | ||||||||| | ||| ||| ||||||||| |
Sbjct 39262 CGGGACGGGTCAGGCTCAGACCCACCTTTTCGCCCT---GCTGCGGCACCACGGGCAGGA 39318
Query 1574 CGTTGATGCGCTTGAGAAACTCGCTCGATTCCTGCATCTTCGTTTCGAGCCGCTGTTGCA 1633
||||||| ||| || || |||||||||||||| ||||| ||| ||| ||||
Sbjct 39319 TGTTGATGGACTTCAGGAATGAACTCGATTCCTGCATGCGGGTTTCCAGCTTCTGCTGCA 39378
Query 1634 CGGTCGGC 1641
||||||||
Sbjct 39379 CGGTCGGC 39386
Score = 167 bits (184), Expect = 6e-37
Identities = 565/864 (65%), Gaps = 32/864 (4%)
Strand=Plus/Plus
Query 25236 CCACGCGCGCCGGGAAATCGGCGAGGAAGCGGTCGGTGATGCGCTGGCGCAGCACCAGAT 25295
|||||||| | ||| ||| ||| |||||||||||||||||||||| | |||| |
Sbjct 24766 CCACGCGCATGGCGAAGTCGCCGAAATAGCGGTCGGTGATGCGCTGGCGGAATCCCAGGT 24825
Query 25296 TTTCGAGAGGCGGAACCGGCGTGTAGTCGTAATCGATGTACGCCTTGCCGGACGCGAGAA 25355
||| || ||||| || |||||||||||||| || | | |||||||| | |||
Sbjct 24826 CTTCCAGCGGCGGCACGGGCGTGTAGTCGTAGTCAAGCACCAGCTTGCCGGCCTTGAGCG 24885
Query 25356 TGTCGGCCGTGTTCGGCTCCGGATCGATCCACGCGCTACCGCCGATCAGGTAGCCGTTCG 25415
|| | ||||| ||| | || | ||| |||| ||| ||| | |||||| |
Sbjct 24886 CTTCTGTGGTGTTGACCTCGGCGTCAAACCAGGCGCGGCCGTCGAGGATGTAGCC---CA 24942
Query 25416 CGACCT---GCTGCCGAAACCAGCCGTTGATGCTTTCCACGATGTCGCGCGCGAGCGACG 25472
| ||| | | || ||| | | ||||||| |||||||||||| | | | |
Sbjct 24943 GGGCCTTGAGTTCGCGGAACTTGGCATTGATGCCTTCCACGATGTCTTTCACCATGCTGG 25002
Query 25473 GATTCAGCGGGCCGTCGACGACGGGCATCTGCGCTTCGGCGATCGAATCGCCGGCCACCT 25532
| | || || |||||| | || | || | || || || | ||| | |||||
Sbjct 25003 GGTGCATGGGCTTGTCGACAAAGGCGAAATGACCCTCTGCCATGGTGTCGGCCAGCACCT 25062
Query 25533 GAGCGGTGCGCGTGTAGTTCTCGAACGCGAAC--TTCGGATCGTCCGAGCACGTGCGCTC 25590
| || |||||| | | |||||| |||| |||| ||| ||| ||||||
Sbjct 25063 GGGCAGTGCGCACGCTGGACTCGAATCGGAACAGTTCG--TCGGTGCTGCAGGTGCGCGA 25120
Query 25591 GCCCCAGAACCGGAAGCCGTTGCGGTTCACGAGCGTCGTCACTTCGTGCTCGTTCAGGTA 25650
|||||||| || |||| | | ||| | |||||| || || | | ||| || ||
Sbjct 25121 TCCCCAGAAGCGATAGCCCTGGTAGTTGATGAGCGTGGTGACGTTGCCCTCATTGAGCAG 25180
Query 25651 GCCCGCATCGGTCGCCGGGTCCTGCAAATCCCACGACACGTCGGCGCTGATGCCGGACAC 25710
| || || ||| ||| | |||| || | |||||| ||||||||| |
Sbjct 25181 GTTTGCGTCCGTCTCCGAGCTTTGCAGGTCGAAATGCACGTCCTTGCTGATGCCCACCGG 25240
Query 25711 GCCGTTCA-CGACGACATTCGAAATCGTCTTGTGCCAGCCGATGTCGTTGTCGATCTTCG 25769
||| || | || | || || || | ||||||||||| || || |||||| |
Sbjct 25241 GCCATTTAGCGGC-ACGTTTGACAGGGTCTTGTGCCAACCTTGCTCCACGTCGATGCGGG 25299
Query 25770 CGCGCAAGCCG---GCG---GCGATCGCCGGCGCCGGGATGACAGCCGTCGAGTTCGTCG 25823
|||||| || ||| || | |||||||| |||| ||| | ||| | ||
Sbjct 25300 CGCGCAGCCCCATCGCGTAGGCCACAGCCGGCGCATTGATG---GCCTT---GTTTGCCG 25353
Query 25824 TGTCGTCCCAGCCGAGCCAGTCCGGCCAGATCACCATGATTTCGCGTTGGCCG-AACTGC 25882
|| || |||| | | || ||||||||||||||| ||||||| |||| |||| |
Sbjct 25354 TGGTGTTCCAGGCTTTGAAATCGGGCCAGATCACCATGGTTTCGCGGGCGCCGAAACTCC 25413
Query 25883 TTGCGGTACGCGGCGGCTT--CTTCCTTCGTTTTGCAGCCGGACGCCGACACATAGGCCA 25940
||| ||||| ||| | || | ||| | | |||| | || ||| |||||||
Sbjct 25414 CTGC-ATACGCCAGGGCCTCGCTCACATCG--TCGGCGCCGTGCCCCTGCACGTAGGCCA 25470
Query 25941 TCGCGCGCAGC-GACTGCGCGGTCGCCGCGAGCGCGGCCGCCACCGGCTGCGTATCGAGG 25999
| ||||||||| | || |||| |||| ||| || ||||||| |||| || || ||
Sbjct 25471 TGGCGCGCAGCTGGATG-GCGGCGGCCGTGAGGGCATCCGCCACGGGCTTGGTGTCCAGC 25529
Query 26000 CCGGGCGCCGCGAGAATGCGCGGCTTCACGCCGAGCGCACCCTGCGCGGCGAGCAGCGCC 26059
||||| || | || ||||| || |||||||| ||| |||||||| || |||||||
Sbjct 25530 CCGGGGGCGCCCAGGATGCGGGGTTTCACGCCCAGCTGCTGCTGCGCGGTGATCAGCGCC 25589
Query 26060 TTGATGCCCGTGTACTTGCCGTCC 26083
| ||||| | | ||||||| ||
Sbjct 25590 TGAATGCCGGAGCGCTTGCCGGCC 25613
Score = 105 bits (116), Expect = 2e-18
Identities = 141/196 (72%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 2144 GCTTCGCGGCGAATTGCAGCGCTTCGGTGCCGAGGCTCGCCGGGTCGTCGGTCGCCGCGA 2203
||| |||||| || |||||| |||||||| ||||| ||||| |||||| | || |
Sbjct 39967 GCTGCGCGGCAAACTGCAGCATCTCGGTGCCCAGGCTGGCCGGCGTGTCGGTGACGGCCA 40026
Query 2204 GCCCGACGAGATACGCCTCGCCGATGTCGGCGAAGTCGGGGTTGATCTCGATCGACGTGA 2263
| ||||| | ||| ||||| ||| | | ||||| ||||||| | |||||| || ||
Sbjct 40027 GGCCGACCATATAGGCCTCTCCGGAGCCCGCGAAATCGGGGTCCACCTCGATGGAGGTAT 40086
Query 2264 AGAGCTTCTGGCGCTTCTTCGACAGTGCGACGAGCTCGTCGGTCGGATCGATCTGCGCAT 2323
|||||||||||| ||||| | |||| || ||| || | ||||||||||
Sbjct 40087 AGAGCTTCTGGCCCTTCTGGTTGATGGCGATCAGAGAGTCCAGGGGCTGAATCTGCGCAT 40146
Query 2324 ACAGCGCCATCTTCCC 2339
||||||| | ||| ||
Sbjct 40147 ACAGCGCGAGCTTGCC 40162
>seq5906
Length=1255
Score = 84.2 bits (92), Expect = 5e-12
Identities = 223/334 (67%), Gaps = 10/334 (3%)
Strand=Plus/Plus
Query 25970 AGCGCGGCCGCCACCGGCTGCGTATCGAGGCCGGGCGCCGCGAGAATGCGCGGCTTCACG 26029
||||| | || ||||| |||||| || |||||||| | |||| || ||||| ||
Sbjct 293 AGCGCCGTCGTCACCGCCTGCGTTTCAAGGCCGGGGGTGACGAGGATCTTTGGCTTGACC 352
Query 26030 CCGAGCGCACCCTGCGCGGCGAGCAGCGCCTTGATGCCCGTGTACTTGCCGTCCGGCGTC 26089
|| ||| ||||||| || |||||||||| || || || | | ||||| ||||||
Sbjct 353 CCCAGCTGCGCCTGCGCCGCCAGCAGCGCCTGCATACCTGTCTTTTGGCCGTT-GGCGTC 411
Query 26090 ACG-GTGCCGATGACGTTCGAGGTCGTCTCGTCGGCGTCCTTGCCTTCGGCGACGCGCAC 26148
|| |||||||| || || || || | || || | |||||||| ||||| ||
Sbjct 412 GGTCGTACCGATGACATTGCTGGCGGTTTCCGCCGCATCGTCCCCTTCGGCCACGCGGAC 471
Query 26149 GACGACGGTCAGCGGCTTCGTCTGCTTGCCGATCGCGTCGAGCGTGCGGCGCAGCGTGCC 26208
||||| | | ||| | || | | |||| ||| |||| || |||||||||
Sbjct 472 CACGACAATGATCGGGCGAGCATGATCGGCGATGGCGCGCAGCGACAGGGCCAGCGTGCC 531
Query 26209 TTTCTTGCCGGCCTTGCCGAGCGCCGCGACGACGTTCGTCAGCAGCAC-GGGCGTATTGA 26267
| | | ||||| ||||| || | | || | || | ||| | ||||| || ||
Sbjct 532 GTCCGTCCCGGCGGCGCCGATGGCGGTTTCAACATCGGTGATGAGCGCCGGGCG-ATCGA 590
Query 26268 GCGGAAACGCGCTCGCG---TCAGCGTCGGCCGC 26298
|||| || | | ||| ||||||||||||||
Sbjct 591 GCGGGAA---GATAGCGGGATCAGCGTCGGCCGC 621
>seq9683
Length=137075
Score = 80.6 bits (88), Expect = 6e-11
Identities = 104/141 (74%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 9525 GCCACGTGGTCCCGCCCGAGGTGCGCGTAGCGCAGCACCATCTGATAGC-TGGCCCATCC 9583
|||| ||| ||| || | ||||| || || | |||||||| ||| | ||| ||
Sbjct 49437 GCCAAGTGCTCCGGCGCCAGGTGGGCATATTTCTTCACCATCTCC-AGCGTCTTCCAGCC 49495
Query 9584 TCCGAGCTGCTGAAGGATTGGCAGAGGCGTGCCGGCCTGAACGTGCCAGCTCGCCCACGT 9643
||| |||| || |||| ||| |||||||||| || || |||||||||||||| ||
Sbjct 49496 TCCCAGCTCCTTCAGGACGAACAGGGGCGTGCCGGATTGGACATGCCAGCTCGCCCAGGT 49555
Query 9644 GTGCCGCAGATCATGAAAGCG 9664
||||||||| || || |||||
Sbjct 49556 GTGCCGCAGGTCGTGGAAGCG 49576
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120301683128558
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