Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6988 257 3e-63 seq2172 257 3e-63 seq899 188 1e-42 seq6889 181 2e-40 seq14807 134 3e-26 seq9576 125 1e-23 seq12661 120 6e-22 seq13534 102 2e-16 seq6336 84.2 4e-11 >seq6988 Length=415921 Score = 257 bits (284), Expect = 3e-63 Identities = 390/550 (71%), Gaps = 4/550 (1%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| | |||||| || || || |||||||| |||||||| || Sbjct 27333 CTGCAGCATCAGCCACATGCCGCGGACATATTCGCGGGCGTGGCCCCAGTCGCGCTTGGC 27392 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCG 268365 ||||| ||| || || | || | ||| ||| |||| | | || | |||| Sbjct 27393 GTCCAGGTTGCCCAGATAGAGCTTGTCCTGGAAGCCCTGCTTGATGGCCGCGACGGCGCG 27452 Query 268366 AGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGAT 268425 ||||| || ||||| ||||| |||||||| || |||||||| |||||||| || ||||| Sbjct 27453 GGTGATCTTGCGGGTGACGAAGGTCTCGCCGCGCAGAGGGCTTTCGTGGTTAAACAGGAT 27512 Query 268426 GCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAA 268485 |||||||| ||| | |||||| ||||| ||||||||||| || ||||||| || | Sbjct 27513 GCCGTTGCTGGCGTGGACGCCATAGGCCTCGCGGTAGTTCACCACGATCCAGTAGCCATA 27572 Query 268486 CATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGAT 268545 | ||| || | ||||| || || |||| ||||||||| | | || || | Sbjct 27573 GAGCTTGGCGGCGGCGTAGGGGCTGCGCGGATAAAAGGGCGTCTTTTCGCTCTGCGGCAC 27632 Query 268546 TTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTC 268605 ||| |||| ||| | || || |||||||| || || |||||| || | ||||| Sbjct 27633 TTCCTGGACCAAGCCGTACAGTTCCGAGGTCGAGGCCTGATAGAACCGGGTCTTCTTTTC 27692 Query 268606 GAGACCGCAG-ATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCG 268664 | | | ||| || ||||| || || |||| || || || ||| || | || ||| | Sbjct 27693 CA-AGCCCAGAATGCGGATGGCTTCCAGCAGGCGCAGCGTGCCCGTGGCGTCGGCGT-TG 27750 Query 268665 CT-GTATACTCCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAA 268723 || || || ||||| ||||||| |||||||| ||||||||||| ||||||| || Sbjct 27751 CTGGTGTATTCCGGGGTCTCGAAGCTGACCTGGACGTGGCTCTGGGCCGCCAGGTTGTAG 27810 Query 268724 ACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCT 268783 | || ||||| | | ||||||||||||| | |||||||| |||||| | ||| Sbjct 27811 ATTTCGTCCGGCTGGGTCTGCTGCACGATCCGGATCAGGTTCGTGCTGTCGGTCATGTCG 27870 Query 268784 CCGTAGTGCA 268793 |||||||||| Sbjct 27871 CCGTAGTGCA 27880 >seq2172 Length=1301 Score = 257 bits (284), Expect = 3e-63 Identities = 519/766 (68%), Gaps = 7/766 (1%) Strand=Plus/Plus Query 268196 ACAGAATACTGGACCCCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATT 268255 || |||| ||| | || || || |||||| ||||||| || | ||| ||||| Sbjct 480 ACCGAATGCTGCTCGCCGGTGGCGATCACATAGTCCTCGGGGGCGTCCTGCTGCAGCATC 539 Query 268256 TTCCACATTGCTTC--GACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGT 268313 |||| ||| || ||||||||| || || |||||||| ||||| || | | || Sbjct 540 AGCCAC--TGCATCTCGACATAGTCGCGGGCGTGGCCCCAGTCGCGGCGGGCATTGAGGT 597 Query 268314 TCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTT 268373 | ||||| | || | |||| ||||||||| | ||| || || | || ||||| | Sbjct 598 TGCCGAGATAGAGCTTGTCCTGCAGGCCGAGCTTGATGCGCGCCAGCGCCCGCGTGATCT 657 Query 268374 TTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGC 268433 | || |||||||| |||||||| || | ||| ||||||||||| ||||||||||||| Sbjct 658 TGCGCGTCACGAAGGTCTCGCCGCGCACCGGGGATTCGTGGTTGAACAGGATGCCGTTGC 717 Query 268434 ACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTG 268493 | || | ||||| || |||||||| |||||||| ||||||| || | | ||| | Sbjct 718 AGGCATAGATGCCGTAGGCCTCACGATAGTTCACCGTGATCCAGTAGGCGTAGAGCTTGG 777 Query 268494 CAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGA 268553 | || || || || || || |||| ||| |||||||| ||| || || | || | | Sbjct 778 CGACCGCATAGGGCGAGCGCGGATAGAACGGCGTCGTCTCCTTCTGCGGCACCTCCTGCA 837 Query 268554 CTTTGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGC 268613 | ||| | || ||||||||||| || || |||||| || | || || ||| Sbjct 838 CGAGGCCGTACAGTTCGGAGGTCGACGCCTGATAGAACCGCGTCTTGCGCTCCAGCCCGA 897 Query 268614 AGATTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACT 268673 || ||||| ||||| |||| || || | ||||| |||| | || || || | Sbjct 898 GAATCCGGATCGCCTCCAGCAGGCGCAGCGGTCCCAGCGCATCGGAATTGGCGGTGTATT 957 Query 268674 CCGGCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCG 268733 ||||| |||||| |||||| |||||||||||| || | || || || | ||| |||| Sbjct 958 CCGGCTCCTCGAACGACACCGCGACATGGCTCTGCGCCGCGAGATTGTAGATCTCGTCCG 1017 Query 268734 GTTTGACCTGCTGCACGATCTTCACGAGGTTCGTTGAGTCGGTGAGGTCTCCGTAGTGCA 268793 | | ||||| |||||||| | ||| | | | |||||||||||| || | |||| Sbjct 1018 GCTGCACCTGGTGCACGATGCGGATCAGGCTGGAAGCGTCGGTGAGGTCGCCATGATGCA 1077 Query 268794 AC-ACAAG--CTGCCCTGACTCGGAGTACTTGTCGTACAGTGCATCAATTCGCTGGGTAT 268850 | ||| ||||| |||| | || |||||| ||| || || | ||| | Sbjct 1078 GCGTGAAGTCGTGCCCCTTCTCGTGCAGGTCGTGGTACAGGTGATCGATGCGATCGGTGT 1137 Query 268851 TCAGTTGCGAAGAGCGCCGTTTGATTCCATGAACGACGTACCCAATGTTGATGAGGAATT 268910 | | |||| | ||| || ||||| || || ||| ||| || || | || | || Sbjct 1138 TGAACAGCGAGGTGCGGCGCTTGATGCCGTGCACGCTGTAGCCCTTGGACAGCAGCAGTT 1197 Query 268911 CTGCAAGGTAAGAGCCATCTTGCCCCGTGATTCCCGTAACAAGGGC 268956 | || || || | ||| || || ||||||| ||||| | ||||| Sbjct 1198 CCGCCAGATAGGCGCCGTCCTGGCCCGTGACACCCGTGATCAGGGC 1243 >seq899 Length=2520420 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | | ||||| |||||||| || ||||||||||| |||||||| || || || Sbjct 2264402 CCTCCCCTCAAGCGCAGGACCAAGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGAC 2264461 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||||||| | ||| |||||||| || || || || || ||||| || || Sbjct 2264462 AGGGTGCGCCCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGG 2264521 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| || |||||||| ||||| ||||||||| |||||||||||| | || || Sbjct 2264522 ATGCCCTCTTTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACC 2264581 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || ||||| | |||||| ||||| |||||||| Sbjct 2264582 TCCAGGGTGATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264628 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| |||||||| || || || || || | | Sbjct 2264639 AGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 2264698 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| |||||||| || || || || || ||||| || || ||||| || Sbjct 2264699 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCT 2264758 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| ||||||||| |||||||||||| | || || |||| |||| Sbjct 2264759 TTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 2264818 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| | |||||| ||||| |||||||| Sbjct 2264819 ATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2264856 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| |||||||| || || || || || | | Sbjct 2264867 AGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 2264926 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| |||||||| || || || || || ||||| || || ||||| || Sbjct 2264927 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCT 2264986 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| ||||||||| |||||||||||| | || || |||| |||| Sbjct 2264987 TTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTG 2265046 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| | |||||| ||||| |||||||| Sbjct 2265047 ATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265084 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| |||||||| || || || || || | Sbjct 2265095 AGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGT 2265154 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| |||||||| || || || || || ||||| || || ||||| || Sbjct 2265155 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAGCCTCTGCTGGTCTGGGGGGATGCCCTCT 2265214 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 |||||||| ||||| ||||||||| |||||||||||| | || || ||||||||| Sbjct 2265215 TTGTCTTGGATCTTGGCCTTGACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAAGGTG 2265274 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || ||||| | |||||| ||||| |||||||| Sbjct 2265275 ATGGTCTTGCCCGTCAAGGTCTTCACGAAGATCTGCAT 2265312 Score = 174 bits (192), Expect = 3e-38 Identities = 170/219 (78%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 ||||| | |||| ||| || ||||||||||| |||||||| || || || || || | | Sbjct 2265323 AGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGC 2265382 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 |||||||| | ||| |||||||| || || | || |||||||| || || |||||||| Sbjct 2265383 CCATCTTCCAGCTGTTTCCCGGCAAAGATCAACCTCTGTTGGTCTGGGGGGATGCCTTCT 2265442 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || ||||| ||||| ||||||| |||||||||||| || || || |||| || Sbjct 2265443 TTTTCTTGTATCTTCACCTTGACATTCTCGATGGTGTCACTTGGCTCCACCTCCAGAGTA 2265502 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||||| || ||||||||||| || || ||||||||| Sbjct 2265503 ATGGTTTTACCAGTGAGGGTCTTTACAAAGATCTGCATT 2265541 >seq6889 Length=11136585 Score = 181 bits (200), Expect = 2e-40 Identities = 171/218 (78%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68244 AGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC 68303 || || | ||||| ||| || || |||||||| |||||||| ||||| || || || | Sbjct 1034018 AGACGGACTACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGG 1034077 Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363 | |||||| | |||||| ||||| || ||||| || || ||||| || |||||||||||| Sbjct 1034078 CAATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCC 1034137 Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423 || || || ||||| ||||| ||| |||||||||||| | ||||| |||| |||| Sbjct 1034138 TTATCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCTACCTCCAGGGTG 1034197 Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| || || || |||||||| ||||| |||||||| Sbjct 1034198 ATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1034235 Score = 167 bits (184), Expect = 4e-36 Identities = 173/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || | ||| || | |||| ||| || || |||||||| || ||||| ||||| || Sbjct 1033781 CCACCCCTAAGACGAAGGACCAGGTGCAGGGTCGACTCTTTCTGAATGTTGTAATCAGAA 1033840 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| ||||| || ||||| || || ||||| || ||| Sbjct 1033841 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGA 1033900 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| || || ||||| ||||| ||| |||| ||||||| | ||| | Sbjct 1033901 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCGGTGGTGTCACTGGGCTCTTCC 1033960 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| |||||||| || || || |||||||| ||||| |||||||| Sbjct 1033961 TCCAGGGTGATGGCCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 1034007 Score = 163 bits (180), Expect = 5e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || || ||||| || |||||||| ||||| || || || | |||||||| Sbjct 1034255 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCC 1034314 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || ||||| || || ||||| || |||||||||||||| || || Sbjct 1034315 AGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGG 1034374 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || |||||||||||| | || || |||| ||||||||| || Sbjct 1034375 ATCTTGGCCTTCACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTG 1034434 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 || || ||||| || ||||| || |||||| || Sbjct 1034435 CCGGTCAGGGTTTTCACGAAGATTTGCATTTTG 1034467 >seq14807 Length=423 Score = 134 bits (148), Expect = 3e-26 Identities = 134/174 (77%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 268351 GCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTC 268410 ||| || || |||| ||||| || ||||| ||||| || ||||| || | |||||||| Sbjct 174 GCGGGCCAGTGCGCGGGTGATCTTGCGGGTGACGAAGGTTTCGCCGCGGATCGGGCTCTC 115 Query 268411 GTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGAC 268470 |||||||| |||||||||||||| ||| | ||||| || ||||| |||||||| ||| Sbjct 114 ATGGTTGAACAGGATGCCGTTGCAGGCGTAGATGCCGTACGCCTCGCGGTAGTTGACGGT 55 Query 268471 CGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGG 268524 ||||||| ||| ||| ||| ||||| ||||| || || || | |||||| Sbjct 54 GATCCAGTAAGCATACAGCTTGGCAACCGCGTAGGGGCTGCGCGGGTAGAAGGG 1 >seq9576 Length=119252 Score = 125 bits (138), Expect = 1e-23 Identities = 201/287 (70%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 268246 CTGGAGCATTTTCCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGC 268305 ||| ||||| |||||| || ||||||||||| ||||| || ||||| |||||||| || Sbjct 84241 CTGCAGCATCAGCCACATGGCCTCGACATAGTCGCGCGCGTGACCCCAGTCGCGCTTGGC 84300 Query 268306 GTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCG 268365 ||||| || || || | | ||||||| ||| ||||| | | ||| |||||| Sbjct 84301 GTCCAGATTGCCCAGCTCGACGGTCTTCTGCTGGCCCAGCTTGATGGCCGCA--ACCGCG 84358 Query 268366 --AGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGG 268423 |||| || |||||||||||| ||| || || || || ||||||||||| ||| Sbjct 84359 TCGGTGACCTTGCGGGTCACGAACTCGATGCCGCGCAGCGGACTTTCGTGGTTGAACAGG 84418 Query 268424 ATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCA 268483 |||||| | ||| || |||| | ||| || |||||||| | |||||| || Sbjct 84419 ATGCCGCACGAGGCGTGCAGGCCAAAGCTCTCGCGATAGTTCACCGTCATCCAGTGCCCA 84478 Query 268484 AACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGGGCGTCGT 268530 | | ||| || || || || || || || || | ||| || || || Sbjct 84479 TAGAGCTTGGCCACCGCATAGGGCGAGCGCGGGTAGAACGGGGTGGT 84525 >seq12661 Length=3984070 Score = 120 bits (132), Expect = 6e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || ||||||||||| ||||| || || || || | || ||||| || Sbjct 2676663 ACCAGGTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGACAAAGTGAGGCCATCCTCC 2676604 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || || || | || ||||| ||||| ||||| ||||||||||| Sbjct 2676603 AGCTGTTTGCCCGCAAAGATCAGACACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 2676544 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| ||| | ||||| | || || || | ||||||||| || Sbjct 2676543 ATTTTGGCTTTGACATTCTCAGTAGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTG 2676484 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || |||||||| Sbjct 2676483 CCCGTCAGGGTCTTCACAAAGATCTGCAT 2676455 >seq13534 Length=1158 Score = 102 bits (112), Expect = 2e-16 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 268217 GCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGC--TTCGACAT 268274 || ||||| ||||| || |||| ||| ||||| |||| ||| ||| || | Sbjct 200 GCGATCACGAAGTCTTCGGGCTGCTCTTGCTGCAGCATCAGCCAC--TGCATTTCCACGT 143 Query 268275 AGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCT 268334 |||| || ||||||||||| || ||||||||||||| ||| || ||| | || | || Sbjct 142 AGTCACGGGCATGGCCCCAGTCACGCTTTGCGTCCAGGTTGCCCAGGTAGAGTGCGTCCT 83 Query 268335 GCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGC 268394 | || ||||| | ||| || || |||| ||||| || ||||| ||||| || |||| Sbjct 82 GGAGTCCCAGCTTGATGCGGGCCAGTGCGCGGGTGATCTTGCGGGTGACGAAGGTTTCGC 23 Query 268395 CACGTAGAGGGCTCTCGTGGTT 268416 | || | |||||||| ||||| Sbjct 22 CGCGGATCGGGCTCTCATGGTT 1 >seq6336 Length=1004492 Score = 84.2 bits (92), Expect = 4e-11 Identities = 76/93 (82%), Gaps = 2/93 (2%) Strand=Plus/Plus Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCAC-GCGAACATGCCATATGCCTCACGGTA 268461 ||||||||||||||||||||||||||||| ||| || |||| | || ||||| ||| | Sbjct 409130 GGGCTCTCGTGGTTGAAGAGGATGCCGTT-CACTGCAAACAGGTTGTACGCCTCCCGGAA 409188 Query 268462 GTTCACGACCGTCCAGTATGCAAACATCTTTGC 268494 |||||| || ||||||| ||| | | |||||| Sbjct 409189 GTTCACCACAATCCAGTAGGCATAGAGCTTTGC 409221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921448916103480