Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq7053 86.0 6e-12
>seq7053
Length=464797
Score = 86.0 bits (94), Expect = 6e-12
Identities = 188/280 (67%), Gaps = 4/280 (1%)
Strand=Plus/Plus
Query 20147 GGAGTGCGCGTCAGCTGCAGCCGTAGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCT 20206
|| ||||| |||| ||||||||| |||| | ||| | ||||| || || ||
Sbjct 70227 GGCGTGCGGGTCATCTGCAGCCGCGCCTGCTCGAAATGATTGGCATAGATATGCGCGTCA 70286
Query 20207 CCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGAGCAAGCATATAAGTT 20266
|||| ||| |||| || || || || | || || || || || || | ||| ||
Sbjct 70287 CCCAGCGTATGAACGAAATCACCCGGCTTCAGGCCCGTGACCTGCGCCACCATCAGTGTC 70346
Query 20267 AAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGA 20326
| || | |||| ||| ||||| || || || || | || || | || | ||||
Sbjct 70347 AGCAGCGCATAGGAGGCGATGTTGAACGGCACGCCGAGGAAGATATCGGCAGAGCGCTGA 70406
Query 20327 TACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACATAACAAGTGACAGGGC 20386
|| ||||| ||||| |||| || || | ||||| || || | | |||||||||||
Sbjct 70407 TAGAGCTGGCAGGACAGCTTTCCATCGGAAACATAGAACTGGAACAGGCAGTGACAGGGC 70466
Query 20387 GGAAGCGCCA--TCAACGACAAGTCCGCCGGGTTCCACGC 20424
|| | ||||| || | || || |||||||||||||||
Sbjct 70467 GGCAACGCCATTTCGTCCACCAG--CGCCGGGTTCCACGC 70504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441289717087560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |