Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_009382.1
Length=38760
Score E
Sequences producing significant alignments: (Bits) Value
seq7272 439 6e-119
seq9683 105 2e-18
seq11369 102 2e-17
>seq7272
Length=98981
Score = 439 bits (486), Expect = 6e-119
Identities = 794/1147 (69%), Gaps = 33/1147 (3%)
Strand=Plus/Minus
Query 4523 TGGGGTCGTAGCCGACCCACACCGGCCGGTTGCCGAACGGCCGTGGCGCGAACGGCCGGA 4582
||||||| ||||| | ||| || ||| | ||| |||||||| || ||| ||| ||
Sbjct 41860 TGGGGTCATAGCCAATCCAGACGGGCTTTTGGCCAAACGGCCGCAACGTGAAGGGCTTGA 41801
Query 4583 AGTCTTCCCATACCTCCCAACTGTCCACCATCCCGCGCATGAGCATCGCGAGCGG--AAA 4640
| || ||| | ||||| |||||| | | |||||| ||| | | ||||| |||
Sbjct 41800 AATCGCTCCACGCATCCCAGCTGTCCGCATGGCAGCGCATCAGCGTGGACAGCGGGAAAA 41741
Query 4641 CACCGACGCGTTGTCGTCGATGAATACGCACATGAGCAGGTTGGCGAAATCGAGTTCGCT 4700
|| ||| | |||| |||| || ||||||||||||||||| | | || ||
Sbjct 41740 CAGCGAAGG--TGTCATCGACAAACCCGCACATGAGCAGGTTGTCCCATTCCTCGTCCGA 41683
Query 4701 GTACTCCAGGCGCAGCTGGTCGAGGTCGAACAGGTTGCAGCCGCCGCGGAGCGCATCCTC 4760
||||| | |||||| | ||| ||||||||||| |||||||||||||| ||||||||
Sbjct 41682 ATACTCGAAGCGCAGTTCGTCAAGGTCGAACAGATTGCAGCCGCCGCGCTGCGCATCCAG 41623
Query 4761 CACCGTCACGATTTGGCGCCACTGGCCGTCCGCGCAGCGCATGCCGTC-GCGAAGCGCGG 4819
|||||| || || || ||||| |||| ||| | | ||| | || | | |||
Sbjct 41622 CACCGTGACAATCTGCCGCCATATCTTGTCCTCGCCGGTGAAGCCTCCAGCCAGGTGCGA 41563
Query 4820 CGTGGCTCAGGTCGAGCTTGATCTGTTTGTCCTTGGCCTTGCCGCG------GTTGAACA 4873
||||||||||| |||| || | |||||| ||| |||| |||||
Sbjct 41562 A-TGGCTCAGGTCCAGCTCTATGCG---GTCCTTT---TTGGCGCGCTTCTTGTTGATGC 41510
Query 4874 GTGCGCCGGACCAGAACGGATAGGCCTCATGCGACAAGCTGGACGGCGTGGAGAAGTAGG 4933
|| || || ||| | || |||||||| ||| || |||| |||||||| || |
Sbjct 41509 GTTCGGCGCTCCACAGCGCATAGGCCTGGTGCTGCAGGCTGCTGGGCGTGGAAAACAGCG 41450
Query 4934 TCTGACGCCAGTGCTTGTGGATCGCCATGCCGGAGGCGACCTTGCGCAGTTCCTGGAAGC 4993
||| ||||| ||||||||||| ||||| ||| ||| ||||| | ||| ||| ||||
Sbjct 41449 TCTTGCGCCAATGCTTGTGGATGGCCATACCGCTGGCCACCTTCCACAGCTCCGTGAAGT 41390
Query 4994 GCGGCACCCAGAAGTATTCATCGAAGTACAGGTTGCCGTGATACGACTGCGCGGTGCGGG 5053
||||| ||| |||||||||| || || |||||||| |||||||||||||||||||
Sbjct 41389 TGTTGACCCAAAAGAATTCATCGAAATAGAGATTGCCGTGGTACGACTGCGCGGTGCGGG 41330
Query 5054 CGTTCGTGCCGAGAAAGTAGAGCGTGGCGCCGTTGGGCAGCACCATCGGATCGCCCTTCA 5113
|| ||||||| || || || ||||||||||| ||| ||| || || || ||||||||||
Sbjct 41329 CGCTCGTGCCCAGGAAATACAGCGTGGCGCCATTGCTCAGGACGATGGGGTCGCCCTTCA 41270
Query 5114 GCTCGATCCCGGCCGCGTCCTTGGCGAACTGGATGATGTATTGCTTGAAGACGTGCGCCT 5173
||||| || |||||||| ||| ||||||||| ||| ||| || || ||||
Sbjct 41269 AATCGATATCGCAATGCTCCTTGGCAAACGCGATGATGTACTGCCGGAAAACATGGGCCT 41210
Query 5174 GCGCCTTGCTGGCCGATAGGAAAATCTGGTTGCGGCCGGTGGTCAGCGCGTCGATGAACG 5233
|||| ||||||||| || |||||||| |||||||| || |||| || || || | |
Sbjct 41209 GCGCACGGCTGGCCGAAAGAAAAATCTGATTGCGGCCCGTCTTCAGGGCATCAATCAGGG 41150
Query 5234 CCTCGCGTGCGAAGTACCACGTCGCGCCGATCTGCCGGCTCTTGAGCAGGTTGCGGATGC 5293
||||||| ||||||||||||| || |||||||| || ||||| | | ||| |||
Sbjct 41149 CCTCGCGGCCGAAGTACCACGTTGCCCCGATCTGGCGCGATTTGAGAATGGCGCGCGTGC 41090
Query 5294 ---GCTCGACCTGCCCAGCCTCGTACCAGACGCGCTGGTAATCGAACATCGAGTCGCGGA 5350
||| || ||| ||| |||| | ||||| | ||| | ||| || | |
Sbjct 41089 GCTGCTGGATCTG------CTCCCACCATGTGTTTTGGTAGTTGAAAAGCGAATCCAGAA 41036
Query 5351 AGGCCTCCAGGAGCTGCGTCTGTTCCTCGGGACTGATCGCATTGCGCTCGGGCTTGCTGC 5410
| ||| || || | ||||||| ||| ||||||||||||| |||| |
Sbjct 41035 ATGCCCGTGTGATCTTGTCCACGTCCTCGGACGTGAAGTGATTGCGCTCGGGC-TGCTTC 40977
Query 5411 -GCGGCCCCTTGTTGCGGTTCGCCACCTTCGGGTTCAGGTCGGTTTCGTTGCCGCTGGCC 5469
|| || ||||| || | | |||| ||||| || | ||| ||| || |
Sbjct 40976 TTAGGTCCGGCATTGCGCTTTTCAATGGTCGGATTCAGATCCGATTCTCGGCCCGTGCGC 40917
Query 5470 TCGTACCGGCGCACGCGCGCCATGCGCTCCATTTGTCGGCCAAGCAGGTCGATTTCCTTG 5529
||||| | |||||||||||| ||||||||| || || ||| |||||||||||||
Sbjct 40916 TCGTATTTGTGCACGCGCGCCAAGCGCTCCATGGCACGCCCCAGCGCGTCGATTTCCTTG 40857
Query 5530 TAGTCCCGGCCTTCCTTCACCTCCTTGGCGACGAGC-TGCGCCATGCGCTCTTCGATGCT 5588
||||| | | |||| |||||||| || |||| ||| || |||| ||| | ||
Sbjct 40856 TAGTCGCCGTTGCCCTTGCCCTCCTTGTTGATGAGCGTGC-ACAGGCGCATTTCCA-GCG 40799
Query 5589 GT-TCGCCACGCGCTCCACTGCATCCGCCGCGTCCCACCCATCGCGCCGCTTCCAGCTGT 5647
| | | || |||||||| | | ||||| ||||| |||||| | |||||| ||
Sbjct 40798 ATCCCTCGACACGCTCCACGGGCTTGGCCGCATCCCATCCATCGGCCTTTTTCCAGTCGT 40739
Query 5648 GCACCGT 5654
||| |||
Sbjct 40738 GCAGCGT 40732
Score = 347 bits (384), Expect = 3e-91
Identities = 645/932 (69%), Gaps = 21/932 (2%)
Strand=Plus/Minus
Query 2984 TCACCGATCCAATCGTTGATTGCCAAC---AGGCGGTCCTGCAGGGGCTTCACCTCGTTG 3040
|| || ||||| || ||||| ||| | | ||| ||||||||||| | ||||||
Sbjct 43354 TCCCCCATCCATTCATTGATGGCCTGCGCGAAGCGCGTCTGCAGGGGCTGGATTTCGTTG 43295
Query 3041 CGCGCGAACACCATCGCCGCCTTCTCCACGTCGCCGAATCCGCCGGTGTTGTTCGGAATG 3100
|||||||||||| || || || |||| |||||||| || || | ||| ||| |
Sbjct 43294 CGCGCGAACACCCGTGCAGCGTTGACCACATCGCCGAAGCCACCTGCATTGGCCGGCACC 43235
Query 3101 ATGCCCATGAGCTGCGGCGGTACGCGGTGCGCGGCGAGCTGGTCGTCGCGCGTGACGTTC 3160
| ||||||||||||||| || |||||||| ||||| | ||||| ||||| | ||||||
Sbjct 43234 ACGCCCATGAGCTGCGGAGGCACGCGGTGGGCGGCCAATTGGTCATCGCGGCTCACGTTC 43175
Query 3161 TTGATGTTCCAGAACTCGTCCTTCGCGGCCACCTCGGACACCGGTAGCAACTGGATCCCA 3220
|||||||| | || || ||||| || ||| ||||| | || |||| ||||| |
Sbjct 43174 TTGATGTTGAAAAATTCATCCTTGGCCGCCGCCTCGCCGATGGGCAGCAGTTGGATGGCT 43115
Query 3221 TCCTTCTTGCCATTGGGCGCGTACATGAACAGGTTGCGGAAATTGCCCGGCCCCTTGGCA 3280
| || ||||| ||||| | | ||||| ||||||||||||||| ||||||| |
Sbjct 43114 TTCTCTTTGCCGCCGGGCGAATGGAAAAACAGATTGCGGAAATTGCCCATGCCCTTGGAA 43055
Query 3281 CTCTTCATCGCCTCGCGCAGCGTGTCGACGTC--CTCCTGCTTCTGCGCCGCATCGGTCA 3338
|||| |||| |||||||| || || || || ||| || || | |||| |||
Sbjct 43054 GATTTCAAGGCCTGGCGCAGCGCATCCACATCGTCTTTTGCCACTTCG--GGATCGCTCA 42997
Query 3339 TGTACAGGATGAAGCCGGCGTGCGAGCCGTTCTTGTAGTACCGGCGCCGGAACAGCGTGG 3398
|| |||||| | ||||| || || || ||||| ||||||||||| ||||||||||
Sbjct 42996 GATAGAGGATGTATCCGGCATGGCTCCCATTGTTGTAATACCGGCGCCGAAACAGCGTGG 42937
Query 3399 CCGATTCGTTCAACCACGTGGCGTTCAGCGCGGACAGGTATTCCGGCAGGCCGTACACCT 3458
|||| || || | ||| | || | |||||||| |||||| | |||||| || || | |
Sbjct 42936 CCGACTCATTGAGCCAGGCGGACTGCAGCGCGGCCAGGTACTGCGGCAGTCCATAGATTT 42877
Query 3459 CCTGATTGATGTCCGGTTCCTGGAGGTGGAACACCGAGCCGGCGGCGAAGGTGTACGGCT 3518
|||| | | || || | ||| |||| | | ||| ||| || |||| | |
Sbjct 42876 CCTGGTGCACATCGGGCTGGAGGATGTGGCAAATGCTGCCTTCGGGAAACGTGTGCTCTT 42817
Query 3519 GCTGCCA-GTTCTGCACaaaaaaaTAGGTGTTCAGGTCGAGCCCGCGCCGAACGTACTTG 3577
|||||| || | || ||| || || ||||| | | |||| |||||||
Sbjct 42816 CCTGCCAGGTGCGGCGGAAACCAA-AGAGTTTCAGACCACGATGCCGCCTTGTGTACTTG 42758
Query 3578 GCCAGAGGCGTGTCG-AGCCGGATTGTCCCGCCCAACACGTTTTCGC-GGCGCTCCAGGT 3635
||||| |||| || || | | || || ||| | ||| || ||| ||||||| | ||
Sbjct 42757 GCCAG-TACGTGGCGCAGGGGCAATGAGCCACCC-AGACGATTGCGCGGGCGCTCAAAGT 42700
Query 3636 ACGCATTGCCGAACACCTGCCAGTCCAGCACCAG-GCGCTCGAACGTCGCGCGCGACAAC 3694
| |||||||||| || | ||||||| | ||| | || | ||| ||||| ||
Sbjct 42699 AGCCATTGCCGAAAACAAGGAAGTCCAG-AGCAGCCCACTGCACCGTGGCGCGGTTCAGA 42641
Query 3695 AGCGGGTGCGGGATGAACGTGCTGACCAGGATATTCCGCTTCACGTAGACGGCCGAGCT- 3753
||||| || ||| | ||||||| | || | | ||| | | || ||| |||
Sbjct 42640 AGCGGATGAGGGCGCAGCGTGCTGGCGAGCACCTGGGCCTTGAATTGGATGGC---GCTT 42584
Query 3754 --GTGGTGCGCGGCGGCGCGGAACGAGCGCGCCAGGCCATCCCACGGCATGGGCGGTTCA 3811
|||||| | ||| ||||| | || ||||||||| ||||| | ||||| | |||
Sbjct 42583 TCGTGGTGGGTGGCAGCGCGCAGCGTGCGCGCCAGACCATCGAAGCTGATGGGGGTTTCG 42524
Query 3812 TACCACTGGCCCATGCGCATGCACTCGACGTAATCCAGCAACTCGCGCCGGTCCAGCACT 3871
||||| | || || || ||| || |||||||||| | |||||||||||||||||
Sbjct 42523 TACCAATCCCCATTGAGCCAGCATTCCACGTAATCCAAGATTTCGCGCCGGTCCAGCACG 42464
Query 3872 TCGACGGGATCGCCGAAAGAGAACACCTCGGC 3903
| ||||||||||||||||||| |||||||
Sbjct 42463 GCCTCGGGATCGCCGAAAGAGAAAGCCTCGGC 42432
Score = 279 bits (308), Expect = 1e-70
Identities = 924/1406 (66%), Gaps = 46/1406 (3%)
Strand=Plus/Minus
Query 19179 CAACGCGGCCGGCCGGTACACCGGCATGAAGGCGCTGCTGACCGCCC-GCAACCGTTTTG 19237
||||| ||||||| | | ||||||| |||||||| | ||||| | ||| | | | |
Sbjct 25619 CAACGTGGCCGGCAAGCGCTCCGGCATTCAGGCGCTGATCACCGCGCAGCAGCAGCTG-G 25561
Query 19238 GCGTCGCGCCGCGCATCCTGGCTGTGCCGGGGCTCGACAGCCTGCCAGTCGGGACCGAGC 19297
|||| || |||||||||| | || ||||| |||| | ||| || | | | |
Sbjct 25560 GCGTGAAACCCCGCATCCTGGGCGCCCCCGGGCTGGACACCAAGCCCGTGGCGGATGCCC 25501
Query 19298 TGGTCACCATCGCGCAGAAGCTGCGCGCCTTCGCCTACCTGTCGGCGTACGGCTGCCAAA 19357
| || ||| ||||||||||| | |||||| || || | ||||| ||| |
Sbjct 25500 TCACGGCCGCCGCCATCCAGCTGCGCGCCATGGCCTACGTGCAGGGGCACGGC-GCCGA- 25443
Query 19358 CCAAGGAAG--AGGCCGTCGCCTACCGCAGCAACTT-CGGCCAGCGCGAAGCGATGGTGA 19414
| | | || ||||| | || || |||| | || |||| |||||| | |||||||
Sbjct 25442 CGATGTGAGCGAGGCCCTGGCGTAT-GCAGGGAGTTTCGGCGCCCGCGAAACCATGGTGA 25384
Query 19415 TGTGGCCGGATTTCGTCGGCTGGGATACCGCCGCCAATGCCGAGACCACCC-TGTG--GG 19471
| ||||| |||||| | |||| | ||| | || || | || ||| | || | ||
Sbjct 25383 TCTGGCCCGATTTCAAAGCCTGGAACACCACGGCAAA---CAAGGCCATCAATGCGCCGG 25327
Query 19472 CCACGGCCCGCGCGGTCGGCTTGCGCGCCAAGATCGACAACGACACCGGCTGGCACAAGA 19531
| |||| |||| | || |||||||| |||||| || || ||||||||||
Sbjct 25326 CTGTGGCCTACGCGATGGGGCTGCGCGCCCGCATCGACGTGGAGCAAGGTTGGCACAAGA 25267
Query 19532 CGCTTTCCAACGTGGCGGTGGGCGGCGTGACCGGTCTGTCGC-GC---GACGTGTTCTGG 19587
| || || |||||| || | ||| ||||| | | || |||||| |
Sbjct 25266 CCCTGTCAAACGTGCCGCTAAATGGC----CCGGTGGGCATCAGCAAGGACGTGCATTTC 25211
Query 19588 GACCTTCAGGACCCGGCGACCGACGCGGGCTACCTGAACGCCAACGAGGTGACCACGCTG 19647
||||| || | ||| ||| ||||| | || || | | | || ||||||||
Sbjct 25210 GACCTGCAAAGCTCGGAGACGGACGCAAACCTGCTCAATGAGGGCAACGTCACCACGCTC 25151
Query 19648 GTTCACCGCGACGGCTACCGCTTCTGGGGCTCGCGCACGTGCAGTGCGGATCCGCTGTTC 19707
| || | | ||||| ||||||||||| |||||||| ||||| | || ||||||
Sbjct 25150 ATCAACTACCAGGGCTATCGCTTCTGGGGATCGCGCACCTGCAGCACCGACGAACTGTTC 25091
Query 19708 GCCTTCGAGAACTACACCCGCACCGCGCAGGTGCTGGCCGACACCATGGCGGAAGCACAC 19767
|||||| | | ||||| || ||||||||||||||||||||||| || | ||
Sbjct 25090 CGATTCGAGTCCAGCGTGCGCACTGCCCAGGTGCTGGCCGACACCATGGCAGAGGGTCA- 25032
Query 19768 ATGTGGGCGAA--CGACCTACCGATGACGCCCACCCTCGTGCGCGATCTGCTGGAGGGCA 19825
| | | | |||| || ||| |||| | | ||| || | |||| ||||
Sbjct 25031 -TTTCGCCTTTGTCGACAAGCCCATGCACCCCAGCATGGTGAAAGACATCGTGGAAGGCA 24973
Query 19826 TCAATGCCAAGTTGCGCATGCTGACCCGCAACGGATACCTGCTGGGCGGCGCCGCGTGGT 19885
||||||||||||| ||| || | | || ||| | || | |||| ||| ||||
Sbjct 24972 TCAATGCCAAGTTCCGCGAACTCAAGGCCCTGGGCTACATCCTCGACGGCCGCGCCTGGT 24913
Query 19886 TCGACGCGGACGCCAACAGCAAGGACACGCTGAAGGCCGGGCAACTCGCCATCGACTACG 19945
| ||||| || | ||||| || || |||| |||||||| | || | | |||||||
Sbjct 24912 TTGACGCCGAGGTCAACACCACAGAAGCGCTCAAGGCCGGCAAGCTGGTGCTTGACTACG 24853
Query 19946 ACTACACGCCCGTCCCACCTCTGGAGAACCTCACGTTCCGCCAGCGCATCACCGACCGCT 20005
||||||||||||| || || ||||| |||| |||||||||||||||||||||||||
Sbjct 24852 ACTACACGCCCGTGCCGCCGCTGGAAGACCTGGGATTCCGCCAGCGCATCACCGACCGCT 24793
Query 20006 ACCTGATGCAGTTCGCCGAAGC-CGT---CAAGGCGGC--TTGAGCTGTGTCCCA--CCA 20057
| | | |||||| | || ||| || |||| | ||| | | || |||
Sbjct 24792 ATTTCGGCGACTTCGCC-ATGCGCGTGGGCA--CCGGCCAGTAAGCCCGGCCGCATTCCA 24736
Query 20058 CCTGACCAGGA-AT---CACTATGGCTCTGCCACGCATCCTCAAGCACTTCAACGTTTTC 20113
| | ||||| || ||| |||| ||||| |||| |||||| ||||| | |||
Sbjct 24735 GCACA-CAGGAGATCCACACCATGGGACTGCCCCGCAAACTCAAGAACTTCGCCACCTTC 24677
Query 20114 GCGGACGGTGTGGTCCACACCGGCG-AATGCGAAGAAATCAACCTGCCCAAGCTCGCGCG 20172
||||| ||| | ||| |||| ||||| ||| ||| ||| |||| ||| | ||
Sbjct 24676 ATCGACGGCGTGAACTACATGGGCGAAATGC-CCGAAGTCACCCTCCCCACCCTCACCCG 24618
Query 20173 CAAGCTGGAGGAATACCGCGCCGGCGGCATGAACGGCGCCATCCAGATCGACATGGGCAA 20232
|||| ||||||||||||| || || |||||||| ||| ||||| |||| || ||||||
Sbjct 24617 CAAGATGGAGGAATACCGGGCGGGTGGCATGAATGGCCCCATCGAGATGGATATGGGCCT 24558
Query 20233 CGAGAAGCTGGAGCTGGAAACCACCTACGGCGGCCCGATGCGCGAAATCCTCAAGCAGTA 20292
|| || |||| || || |||||| ||| || || | ||||| |
Sbjct 24557 GGAAAAAATGGAAGCCGAGCTCAAAACGGGCGGCTATATGAAAGACCTCATGAAGCAATG 24498
Query 20293 CGGCACCACCGCCGTCGATGGCGCCATGATCCGCTTCGCCGGCGCCTACCAGCACGAGGA 20352
|| | || ||| | || || | |||||| | ||| ||| ||| ||| ||
Sbjct 24497 GGGTGCGGCCAAGCACGACGCCGTGCTGCTGCGCTTCACAGGCTCCTTGCAGACCGACGA 24438
Query 20353 CACCAAGGAAGTCGATGCGGTGGAGATCGTCGTGCGCGGCCGGCATACCGAAATTGATTT 20412
|| | | | || || || ||||| ||||| ||||||| || | ||||| ||
Sbjct 24437 CAGCGAAGCCGTGGAGGCCGTGGAAGTCGTCATGCGCGGGCGCCTGACCGAGCGCGACCC 24378
Query 20413 CGGCACCGCCAAGGCCGGCGCCAAAGCCCCGTTCAAGGTCAAGTCCTCGCTGACCTACTA 20472
||||| | |||||||||||| || | | | | ||||| | |||| ||||||
Sbjct 24377 CGGCAGCTCCAAGGCCGGCGACATGGTGGAGCAGACGTACAAGTACAGCCTGAGCTACTA 24318
Query 20473 CAAGATGACCGTCAACGGCGA-AGTCTGGTGCGAGCTGGATTTCGTGAACTTCGTCGAAG 20531
|||| ||||| |||||| | ||| || || | || | |||||| | |||||
Sbjct 24317 CAAGGAAACCGTGGCCGGCGAGACGCTGCTG-GAAATCGACATGGTGAACATGATCGAAA 24259
Query 20532 TCGTTTTCGGCGAGGACCGCCTGGCC 20557
|| ||||||||||||| |||||
Sbjct 24258 AAGTCCACGGCGAGGACCGCATGGCC 24233
Score = 187 bits (206), Expect = 6e-43
Identities = 595/898 (66%), Gaps = 51/898 (6%)
Strand=Plus/Minus
Query 6818 ACAATGCGCAACGATACCCGCCGCC-TCTTCGCGGCGTACAAGG--CTGCAATCGCCAAG 6874
||||||| ||||| ||| || ||| |||||| || |||| | |||| ||| ||
Sbjct 39484 ACAATGCTCAACGCAACC-GCAGCCCTCTTCGATGCCTACACACAACGGCAA--GCCCAG 39428
Query 6875 CTGAACGGCGTGGAGCGCGTCGACGAGAAGTTCAGCGTCGCGCCGAGCGTCCAGCAGAAG 6934
||| ||||||| |||||| | | |||| |||| |||||| ||| |||||||||
Sbjct 39427 CTGTCGGGCGTGGCCAGCGTCGCGCGGCACTTCAACGTCTCGCCGACCGTGCAGCAGAAG 39368
Query 6935 CTGGAGACCAAGGTTCAGGAGTCGAGCGACTTCCTGAAAAGCATCAACTTCTACGGCGTG 6994
||||| ||| | ||||| ||||| |||||||| ||||||| || ||||
Sbjct 39367 CTGGAAACCCGCATGCAGGAATCGAGTTCATTCCTGAAGTCCATCAACATCCTGCCCGTG 39308
Query 6995 --CCCGAACAGGAAGGCGAAAAGATCGGCCTGGGCGTGTCCGGCCCGGTGGCAAGCACCA 7052
||| ||| | ||||||||| | || ||| || || || | || || || ||| ||
Sbjct 39307 GTGCCG--CAGCAGGGCGAAAAGGTGGGTCTGAGCCTGACCCGTCCCGTCGCCAGCCGCA 39250
Query 7053 CCGACACCACC-CAGCAGG--ACCGGGAGACC-----TCCGACATTTCGACGATGGACGG 7104
| ||||||||| | | || ||| ||||| ||||||| | | | ||||
Sbjct 39249 CGGACACCACCGCTGACGGCCCCCGCAAGACCAAAGATCCGACA----GGC-AAGGACAA 39195
Query 7105 TCGCCGTTATCGTTGCGAGCAGACCAACTCGGACACGCACATCACCTACCAGAAGCTGGA 7164
| | || | ||| ||||| | || || || ||||||| ||| || ||| ||
Sbjct 39194 GACCGGATACCACTGCCTGCAGATTGATTCCGATACCCACATCAAGTACGCGATGCTCGA 39135
Query 7165 CGCTTGGGCGAAGTTCGCCGACTTCCAGACTCGCATCCGCGACGCCATCATCAAGCGCCA 7224
|| |||||| | ||| ||||||| ||| || ||| ||||| || | | ||| |
Sbjct 39134 TGCCTGGGCGCACTTCCCCGACTTTCAGGTGCGTATCAGCGACCTGATTGCCGAACGCAA 39075
Query 7225 GGCGCTGGACCGCATCATGATCGGCTTCAACGG--TGTGAGCCGTGCCGCTACGTCGGAC 7282
|||||||||||||||||| | || | ||||| | |||| | || || | ||
Sbjct 39074 TGCGCTGGACCGCATCATGGTGGGATGGAACGGCAAGGAAGCCAAG--GCCACCACCAAC 39017
Query 7283 CGGGTGGCCAACCCGATGCTGCAGGACGTGAACAAGGGCTGGCTGCAGAACCTGCGTGAG 7342
| |||||||| |||||||||| ||| |||||| ||||||||| |||||| ||
Sbjct 39016 TTGACCGCCAACCCTTTGCTGCAGGATCTGACCAAGGGGTGGCTGCAGCGCCTGCGCGAA 38957
Query 7343 CAGGCGCCGCAGAGGGTGATGAAGGAAGGCAAGGCGGCCGCCGGCAAGATCACTGTCGGT 7402
||||||| || | || ||| ||||||| | || |||||| ||||||| ||
Sbjct 38956 GAGGCGCCCGAGCGCGTCATGTCTTCTGGCAAGGTG---GCGGGCAAGGTCACTGTGGGA 38900
Query 7403 GGCGCTGGCGCGGACTATGGAAACCTGGACGCCCTGG---TGTACGACATCACGAATCAC 7459
| |||| ||||| ||||| |||||||||| || | | || | | ||
Sbjct 38899 CCGGGTGGC---GACTACAAGAACCTCGACGCCCTGGCCATGGATGCCA--AGCACTC-G 38846
Query 7460 CTGGTCGAGCCGTGGTA-CGCAGAGGATCCGGATCTGGTCGTTGTGTGCGGTCGCAACCT 7518
||| | || ||||| | |||| || | ||||||||| || | ||| | ||||
Sbjct 38845 CTGATTGATTCGTGGCACCGCA-AGCACCCGGATCTGCGCGCCATCTGCAGCGATGACCT 38787
Query 7519 GCTGTCCGACAAATACTTCCCGCTGGTGAACAGGGACCGCGA----CCCGGTCCAGCAGA 7574
| || ||||| ||||| | ||||||| || ||| ||| | | |||
Sbjct 38786 GATGCATGACAAGCTGTTCCCCATCGTGAACA---ACAACGATCTGCCCAG-CGAGCGCC 38731
Query 7575 TCGCGGCCGACCTCATCATCAGCCAGAAGCGCATCGGCAACCTGCCGGCCATCCGCGTGC 7634
| ||||||||| | | | ||||||| |||| | ||| | | |||| | |||||
Sbjct 38730 TGGCGGCCGACATGGTGGTGAGCCAGATGCGCCTGGGCGGCAGCCAGGCCGTGACCGTGC 38671
Query 7635 CGTACTTC-CCGGCGAATGGCCTGCTGGTGACGCGCCTGGACAACCTGTCCATTTACT 7691
| | |||| || || ||||||||| | |||| ||| | ||||||||||| ||||
Sbjct 38670 CTTTCTTCATCGACG-GTGGCCTGCTCATCACGCCTCTGAAAAACCTGTCCATCTACT 38614
Score = 96.9 bits (106), Expect = 9e-16
Identities = 115/157 (73%), Gaps = 12/157 (8%)
Strand=Plus/Minus
Query 14078 GCGACATCCTCTCCACGCCGATCGGCTCGCGCGTGATGCGCCGCGACTACGGCAGCCAGG 14137
|||||||||| ||||||| |||||| ||||||| ||||||||||| |||||| | |
Sbjct 33182 GCGACATCCTGGCCACGCCCATCGGCACGCGCGTCATGCGCCGCGATTACGGCTCGCTTG 33123
Query 14138 TCCCCGACTTGATCGATCAGCCGTTGAACC------CGGCAACCCGCCTGCGCACCATGT 14191
| |||| || | || ||||| |||| | | || |||||||| |||
Sbjct 33122 TGCCCGCGCTGGTGGACCAGCCCGACAACCGCACCACTGAAATCCGCCTGC------TGT 33069
Query 14192 CCGCCGCCGTGTCTGCCCTGGTGCGCTGGGAGCCGCG 14228
||||||||| ||||||| ||||||||||||||||
Sbjct 33068 CCGCCGCCGCCAGTGCCCTGATGCGCTGGGAGCCGCG 33032
Score = 80.6 bits (88), Expect = 7e-11
Identities = 128/184 (70%), Gaps = 0/184 (0%)
Strand=Plus/Minus
Query 8019 CAAGCTGCTGCCCGAGTACGCGGCCTGGGTCCGTGGCGTGCTGGAGGCCGACACCGGTGC 8078
|||||||||||| || | | ||| || ||||||||| ||||||| |||| ||
Sbjct 38197 CAAGCTGCTGCCTGACTTTGACCCCTACATCGACGGCGTGCTGCAGGCCGATGCCGGCGC 38138
Query 8079 GCAGGACGAGGTCTTCATGACGGTCATGGTGTGGCTGATCGATGTCGGCAACTTCGCCGA 8138
||| ||| || | || || | ||||||| |||||| || ||||||| ||
Sbjct 38137 GCAAGACCCCGTGCTGGTGGAAGTGCTCGTGTGGCAGATCGACGTGGGCAACTGGCCCCG 38078
Query 8139 CGCCCTGGAGCTGGCCACTTACGCCATCCGGCACAAGTTGGAGATGCCCGATCAGTACCA 8198
|| ||| || |||||| ||||| | || ||| || | |||||||||| |||||| |
Sbjct 38077 CGTCCTTGAACTGGCCGACTACGCGCTGCGTCACCAGCTCAAGATGCCCGACCAGTACAA 38018
Query 8199 GCGC 8202
|||
Sbjct 38017 CCGC 38014
>seq9683
Length=137075
Score = 105 bits (116), Expect = 2e-18
Identities = 112/148 (76%), Gaps = 0/148 (0%)
Strand=Plus/Minus
Query 36588 TTCCGCTGGCACGATCTGCGCCACACCTGGGCGAGCTGGCACGTGCAGCGCGGCACGCCG 36647
||||||| ||||| ||||| |||||||||||||||||||| || || |||||||||
Sbjct 49579 TTCCGCTTCCACGACCTGCGGCACACCTGGGCGAGCTGGCATGTCCAATCCGGCACGCCC 49520
Query 36648 CTACAGGTGCTCAAGGAACTGGGCGGGTGGGAAACCATGGAGATGGTGCAACGGTATGCT 36707
|| || || ||||| ||||| || ||| | || ||||||||||| | |||||
Sbjct 49519 CTGTTCGTCCTGAAGGAGCTGGGAGGCTGGAAGACGCTGGAGATGGTGAAGAAATATGCC 49460
Query 36708 CACCTGTCGGCTGGGCATCTGGCGCAGT 36735
|||||| || | | ||| |||| ||||
Sbjct 49459 CACCTGGCGCCGGAGCACTTGGCCCAGT 49432
>seq11369
Length=1866
Score = 102 bits (112), Expect = 2e-17
Identities = 100/129 (78%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 36585 GACTTCCGCTGGCACGATCTGCGCCACACCTGGGCGAGCTGGCACGTGCAGCGCGGCACG 36644
||||| || | |||||||| |||||||||||||| ||||||| ||| ||| |||
Sbjct 1607 GACTTTCGGTTTCACGATCTTCGCCACACCTGGGCATCGTGGCACGCCCAGGCCGGGACG 1666
Query 36645 CCGCTACAGGTGCTCAAGGAACTGGGCGGGTGGGAAACCATGGAGATGGTGCAACGGTAT 36704
|| || | || |||||| || || ||||| ||||| || |||| |||||||| || |||
Sbjct 1667 CCCCTGCTGGCGCTCAAAGAGCTTGGCGGATGGGAGACGTTGGACATGGTGCAGCGCTAT 1726
Query 36705 GCTCACCTG 36713
|| ||||||
Sbjct 1727 GCCCACCTG 1735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123888241645276
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |