Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_009447.1 Length=52414 Score E Sequences producing significant alignments: (Bits) Value seq9516 96.9 1e-15 >seq9516 Length=250571 Score = 96.9 bits (106), Expect = 1e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 29409 GCATCCGCGATCTGGTTCGTCAGGCGCTCTTGAACTTGCAGGCGCTTGGCGAAAATGTCT 29468 || || |||||||| | |||| | ||| || || || ||||||||||| || || Sbjct 193420 GCGTCGGCGATCTGCATGGTCATGGTCTCCTGGGTCTGGAGACGCTTGGCGAAGATCTCG 193479 Query 29469 GCCAGCCGCTTGAGCTTCGAAATACCGACGACTTTGCCGCTCGGGATATAGCCGATATGG 29528 |||| ||| |||||||| | || ||||| |||||| |||| || ||| ||| | Sbjct 193480 ACCAGGCGCGCCAGCTTCGACAGGCCCACGACCTTGCCGGTCGGCATGTAGGCGACCCAG 193539 Query 29529 GCCGTTCCCATGATCGCCGCCATATGGTGTTCGCAGTG 29566 ||| | |||| || || |||||| |||||||||||||| Sbjct 193540 GCCTTGCCCAGGAACGGCGCCATGTGGTGTTCGCAGTG 193577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167573228253008