Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_010324.1 Length=77554 Score E Sequences producing significant alignments: (Bits) Value seq10415 82.4 4e-11 >seq10415 Length=20837 Score = 82.4 bits (90), Expect = 4e-11 Identities = 73/91 (80%), Gaps = 4/91 (4%) Strand=Plus/Minus Query 66341 CTATTTGATT----TGGCGCACCCTACAGGATTCGAACCTGTAACCGACGGATTAGAAAT 66396 ||| |||||| |||||| ||| |||||| ||||||||||||||| ||| |||||| Sbjct 5437 CTAGTTGATTCCAATGGCGCGCCCGACAGGAATCGAACCTGTAACCGCCGGCTTAGAAGG 5378 Query 66397 CCGATGTTCTGTCCAATTGAACTAAGGGCGC 66427 ||| || ||| |||| |||| ||| |||||| Sbjct 5377 CCGGTGCTCTATCCAGTTGAGCTACGGGCGC 5347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 248002475362985