Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq504 82.4 5e-11
>seq504
Length=1076656
Score = 82.4 bits (90), Expect = 5e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14952 ACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAG 15011
||| || | ||| || |||| | |||| || | || ||||| |||||||| || |
Sbjct 268502 ACCACGAAGTCTCAACACTAGACGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAA 268443
Query 15012 AATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAAT 15071
| | | | ||||| | ||| |||||||| | |||| | || ||||| |||||
Sbjct 268442 AGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAAT 268383
Query 15072 TCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTC 15131
||||||||| || || ||| ||||| ||||| | ||||| || |||||
Sbjct 268382 TCCTTCCTTATCCTGGATCTTGGGCTTTACGTTTTCTGTTGTATCCGAGGGCTCGACGTC 268323
Query 15132 TAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179
| || ||||| || |||||||| || || || ||||| ||||| ||
Sbjct 268322 AAGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATCTT 268275
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357326407287815
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |