Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq504 86.0 6e-12
>seq504
Length=1076656
Score = 86.0 bits (94), Expect = 6e-12
Identities = 154/225 (68%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 45117 CCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACG 45176
|| || || |||||||||||| | || || | |||||||| || || || || |
Sbjct 268501 CCACGAAGTCTCAACACTAGACGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAA 268442
Query 45177 GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATG 45236
|| ||| |||| ||| || || || | |||| || ||||||||| || |||||
Sbjct 268441 GTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATT 268382
Query 45237 CCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCG 45296
||||| ||||| || || || | || | |||| || || || | |||||| ||
Sbjct 268381 CCTTCCTTATCCTGGATCTTGGGCTTTACGTTTTCTGTTGTATCCGAGGGCTCGACGTCA 268322
Query 45297 AGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| | || || || || || || || || ||||| ||||||
Sbjct 268321 AGAGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATC 268277
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451918116047640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |