Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq9587 435 1e-117 seq10635 392 1e-104 seq11465 118 4e-22 seq2892 111 6e-20 seq10271 87.8 7e-13 seq9481 87.8 7e-13 seq9020 87.8 7e-13 seq13842 86.0 3e-12 seq8237 86.0 3e-12 seq13715 84.2 9e-12 seq7835 84.2 9e-12 >seq9587 Length=50143 Score = 435 bits (482), Expect = 1e-117 Identities = 814/1168 (70%), Gaps = 41/1168 (4%) Strand=Plus/Minus Query 24380 TGCCCTTCCGCCCGAACCGCGCGCAACGCCGGCTCCTGCGACGCCTCTGGCACCGCAACG 24439 |||||||||| || || |||||||| || || | | || ||||||||||||||| Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357 Query 24440 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTCGACC 24499 ||||||||||||| || ||||| ||||| |||||||||||| |||| | ||||| |||| Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297 Query 24500 ACGCGCTGTTCAACGCGAA-CAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGACGGCC 24558 | ||||||||||| ||| | |||| | |||||||||||||| || | ||||| | ||| Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238 Query 24559 GAGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGCGC 24618 ||||| ||||| |||||||||||||||| ||||||||| ||||||||||||| | | || Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCGA 14178 Query 24619 GACGCGATGCCGCTCGCCAACTGCA-CGCAGTCTGAGATGCTGTTCGGGCACAACAACAG 24677 ||| | || || | | || || || ||| ||||||||| ||||||||||| Sbjct 14177 GACCGCTTCCCCCTGGAGCGCGACAGTGCCGT-GGAGCTGCTGTTCGCCCACAACAACAG 14119 Query 24678 CTCGATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCACGTCTCCGA 24737 | | ||||| || ||||| |||| ||||||||||| || || ||||||||||| Sbjct 14118 CAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGTCTCCGA 14059 Query 24738 GTTCGGGAAGATCTGTGC-CGAGGCGCCGCTGAAGGCCAAGGAGATCGTGACCGGCTCGA 24796 | || ||||||| || || | |||| |||||||||||| | |||||||||| | Sbjct 14058 ACTGGGCAAGATCTCGGCACGCTTC-CCGCATAAGGCCAAGGAGGTGATGACCGGCTCCA 14000 Query 24797 TCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCGCGAGG 24856 | ||||||||||| | | ||||| ||||| |||||| |||||||||||| | | | Sbjct 13999 TTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGCCAACG 13940 Query 24857 GCGAGTTCTACGAGATCACGATGCGCGCCGAGGCGACCGCGCAGCA-GGGCAGACCGCTC 24915 ||||||||||| | | | ||| |||||||| | || | || | || ||| Sbjct 13939 GCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGC-CCTGCACTACACGCACAAGAAGCTG 13881 Query 24916 ACGCCGCGCGACTACCGATTCCACTTCTATCCGTGGTGGCAGGCGCCCGAGTACCGCATG 24975 | ||||||||||| || ||||||||||| |||||||||||| |||| | ||||||||| Sbjct 13880 AGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTACCGCATG 13821 Query 24976 GACGCCG--CTGG-CGTCGTCATCACCGAGAAGGACCGGCAATACTTCGAGACGATCGAG 25032 ||||| | |||| | ||| |||| || || | || ||||| | ||||| Sbjct 13820 GACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCAC---GACTATTTCGACCAGGTCGAG 13764 Query 25033 ---GCGAAGCACGGCATCACGATCGATGCCGAGCAGCGCGCTTGGTACGTCGCAACCCGC 25089 | || ||| | ||| |||||| || ||||| || ||||| || || |||| Sbjct 13763 GTCGAGATGCAGTG---CACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCCACCCAG 13707 Query 25090 GACGCCGACTTCTCCGGCAACGAGGAACGTATGTGGCAGGAATACCCGTCGACGCCCGAG 25149 || || |||||| |||| || || ||||||||||| ||||| || ||||| | Sbjct 13706 GAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACGCCGGCC 13647 Query 25150 GAACCGTTCAAGGTTTCCACGGAGGGCACCTACTACGCGCAGCAGCTCGCCACG---GCG 25206 || | ||| || |||| | |||| |||||||| || |||| | ||| Sbjct 13646 GAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAG------GCCATGGTTGCG 13593 Query 25207 CGCAAGAATGGACGCTTCAAGCAGTCCCTGCCCGTCCTGACCAACGTGCCGTGCTTCACC 25266 | || ||| | || || || |||||| ||| | ||||| || ||| Sbjct 13592 CTCACGAAGCGCGGCGGCATCACCTCGGTGCCCGAGCTG---GATCTGCCGGTCTACACA 13536 Query 25267 TTCTGGGACATCGGCAACAGCGACGGCACGGCTATCTGGGTGCTCCAG-CGCATCGAGCA 25325 |||||||| ||||| | ||||| ||||| |||||| | | ||| | | || | Sbjct 13535 TTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTGCGCG-G 13477 Query 25326 CGAGTGGCGCGCGATCCGCTTCAAGGAAG-GCTGGGGCGAGCCCTACAGCTTCTTCGTGA 25384 |||| ||| ||| || | | || | || | | || ||| | || || |||| Sbjct 13476 CGAGGACCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-ACTACGTGC 13418 Query 25385 AGTGGCTGCAAGGGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGACGCGGACC 25444 ||||| || |||||| ||||| | | | ||||||||||| |||||| | | Sbjct 13417 GCCACCTGCAGGGCCTCGGCTACGTGTTCGGCGGGCACTTCCTGCCGCATGACGCGAATC 13358 Query 25445 ACGTGCGCCAAGGGCAGACGACGAACAAGAGCC-CGAAGCAGATGCTCGAGGAGCTGATG 25503 || ||||| | || || || ||| || || | |||||| ||| ||| ||||||| Sbjct 13357 ACAAGCGCC-TGAGC-GA-TACCAAC-CGATCCACAAAGCAGCAGCTGCAGGCGCTGATG 13302 Query 25504 CCGGGCGTGCGGTTCGAGATCGTGCCGC 25531 |||||| ||| || | | | || |||| Sbjct 13301 CCGGGCCAGCGCTTTGTGGTGGTTCCGC 13274 >seq10635 Length=172665 Score = 392 bits (434), Expect = 1e-104 Identities = 1395/2121 (66%), Gaps = 88/2121 (4%) Strand=Plus/Plus Query 53793 ACCGAGAAGGCCAACGACGTCGCT-CAGAAGATGCGCGCCGCGTTC-AGCCGCTGGATTT 53850 |||||| ||| || || | ||| |||||||| |||||||| || | |||||| | Sbjct 170376 ACCGAGGCGGCGAAAGA-GAAGCTGCAGAAGATCAAGACCGCGTTCCAGAC-CTGGATCT 170433 Query 53851 GGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTC-AACAAC 53909 |||| ||| | | ||| |||| ||||| | || || || |||| |||||| Sbjct 170434 GGACCGACCCCGATCGCACCGATCGGCTGGGGCGGGTGTATAAAGACCCCTTCTAACAAC 170493 Query 53910 ATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCTGCG-CTT 53968 |||| |||||| |||||||||||||| |||| ||||||||||| || | ||| ||| Sbjct 170494 ATCGTGCCGCGCGCCTTCGACGGCTCGCATCTGAAGCTGCCGGGCGCATC-CGGCGCCTT 170552 Query 53969 CGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTA 54028 || || ||| |||||||||||| |||||||||| ||| | |||| | || Sbjct 170553 CGTGCTCTACGATCACCAGAAGCGCGGCATCTGGCGCATCATCGCCGCGGGCGCGACCTA 170612 Query 54029 CCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCATGGAGGA 54088 |||||| ||||| |||||||| ||||| || | |||||| || || ||||||| | Sbjct 170613 CCTCGCCCACGCCGTCGGCGCCGGCAAAACCATGACGATGGCGGCCGCCATCATGGAGCA 170672 Query 54089 GCGCCGGCTGGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGCTGGCGCA 54148 ||||||||| |||||| | |||| ||||| | |||||| || |||||||| Sbjct 170673 GCGCCGGCTTGGCCTGATCGCCAAGGCGATGCTTGTGGTGCCCGGTCATTGCCTGGCGCA 170732 Query 54149 ATTCGCGCGCGAGTTTCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAGCA 54208 ||||||||| ||||| | ||| || ||| ||| |||| | ||||| |||||| Sbjct 170733 GGCCGCGCGCGAATTTCTGGCGCTCTATCCGAACGCCCGCATCCTCGTCGCCGACGAGAC 170792 Query 54209 GAATTTCCACACGCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAACAACCCGGA 54268 || ||| || | |||| || | || ||| | ||| ||| ||| | | | ||| Sbjct 170793 CAACTTCAGCAAGGACAAGCGGCAGCGCTTCTTATCGCGGGCGGCGACCGCGACCTGGGA 170852 Query 54269 CGCGATCATCATCACGCACTCGGCGTTCGGTCGCATCGGCATGTCCGACGAGTAT-GCGT 54327 |||||||||||||||||||||||| ||| | ||||||| || ||| || | | | | Sbjct 170853 CGCGATCATCATCACGCACTCGGCCTTCCGCTTCATCGGCGTG-CCGTCGGCTTTCGAGC 170911 Query 54328 CGCAGTTCATCAGCGACCAGATCGACGAGTGGAAAACCGCGCTCGCCGAGACGGACAAGA 54387 |||| | ||| ||| || | || | | || | | || || || ||| Sbjct 170912 AGCAGATGATCCAGGACGAGCTGGAGCTCTACGAGACGCTGTTGACCAAGGTCGA-AAGC 170970 Query 54388 G-CGACCGCATCACGCGTAAGCAGATCGAGCGCCGTATCGAGCAGCTCGAACGCCGGCTG 54446 | ||| ||| || |||| |||| |||| || | | ||| || || || ||| Sbjct 170971 GACGATCGCGTCTCGCGCAAGCGCCTCGAACGGCTGAAGGAGGGTCTGAAAGAGCGCCTG 171030 Query 54447 GAGGCAAAGCAGGGCAACGAGAAGAAGGACAAGGTGCTGTCGTTCGAGGAGCTGGGCGTC 54506 ||| | || || ||| | ||||| | | || | || |||| | |||||| Sbjct 171031 GAGTC---GC-TCGCCACGCG--CAAGGATGATCTCCTCACCATCTCGGAGATCGGCGTC 171084 Query 54507 GACCGCCTGTTCGTCGACGAGTTCCACGAATTCCGCAAACTCGACTTCGCGACGCAGCAG 54566 |||| | ||||||||||| || ||||||||||| || |||||| ||| | | Sbjct 171085 GACCAGATCATCGTCGACGAGGCGCAGGAATTCCGCAAGCTGTCCTTCGCCACG-AATAT 171143 Query 54567 GGCAAC-ATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATGGACCTGTTCATGAA 54625 | | || | |||||| |||| || |||||||||||| || |||||| | |||| Sbjct 171144 GTCGACGCTGAAGGGCGTCGATCCCAACGGCTCGCAGCGTGCCTGGGACCTCTATGTGAA 171203 Query 54626 GGCGCAATACCTGCGCTCGAAGAAGCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCC 54685 | | | || | | ||||||| || |||||||||||||| ||||| |||||||| Sbjct 171204 GTCCCGATTCATCGAAACGAAGAATCCCGGCCGCGCGCTCGTGCTGGCGTCTGGCACGCC 171263 Query 54686 GATCACGAACACGATGGGCGAGCTGTTCACGGTGCAACGCT---TCTTCCAGCCCGAGCA 54742 |||||| |||||| | |||||| ||| ||||||| |||| || | | ||| | Sbjct 171264 GATCACCAACACGCTCGGCGAGATGTATTCGGTGCAGCGCTATCTCGGCTACGCCGCCC- 171322 Query 54743 GATGGCCGAGGACGGTCTGGACACGTTCGACGCGTGGGC--GAACCAGTACGGCGACGTC 54800 | |||| || || || ||||||||| ||||| |||| | |||||||||| Sbjct 171323 --TCCGCGAGCGGGGCTTGCACGAGTTCGACGCCTGGGCCTCAACC--TTCGGCGACGTC 171378 Query 54801 GTGGCGGGCTTCGAGCAGAACGCGGCGGGCGGCTATGAAGTC-GTCAGCCGCTTCGCGAA 54859 | | | |||||| | | | ||| | || ||| | |||| |||||||||| Sbjct 171379 TCGACCGAGCTCGAGCTTCAGCCCTCCGGCAGATA-CAAGCCGGTCACGCGCTTCGCGAC 171437 Query 54860 GTTCCAGAACGTGCCGGAGCTGATGCGCCGCG-TGCGCTCGTTCATGGACATCCTGACGA 54918 ||| || || || |||||||| |||| | | || || ||| ||| | | | | Sbjct 171438 CTTCGTCAATGTCCCCGAGCTGAT-CGCCATGTTCCGGTCCTTCGCCGACGTGGTCATGG 171496 Query 54919 GCTCGCAGCTCTCGCAG-TACGTCGACCGCCCGGCGATCGATGGCGGCGGCCGTCAGGTC 54977 | | || ||| | ||||| | ||||||||| |||| || ||| || Sbjct 171497 CGGAGGACCT-GCGCCGATACGTGAAGATTCCGGCGATCTCGACCGGCAAGCGCCAGATC 171555 Query 54978 ATGGTCACGCCGGAGC---CGTTCGGCTACAAGGCGTACCAGAAGGCGCTCGAGCAGCGC 55034 ||| ||| || ||| || || || |||| |||||| |||||| |||| Sbjct 171556 ATG---ACGGCGAAGCCGACGGCCGCCTTCAAGCGTTACCAGGTCCAGCTCGATGCGCGC 171612 Query 55035 ATCACCGCGATCCGCAACCGCAAGGGCCCGCCGAAGAAGGGCGAGGACATCATCCTGAAC 55094 |||| |||||| | ||| | | |||||| || ||||| |||||| | || | Sbjct 171613 ATCAAGGCGATCGAGATGCGCGACCGTCCGCCGGAGCCAGGCGACGACATCCTGCTCTCC 171672 Query 55095 GTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGTTGA-CCCGACCGCGCC 55153 || ||| | |||||||| ||||||||||| | ||| | || || || ||| | | Sbjct 171673 GTCATCACCGACGGCCGCCATGCCGCGATCGACCTTCGCCTTGTCGATCCGGACAATGAC 171732 Query 55154 GAGCGACCCGAACAGCAAGCTGAACCAGATGATCGACGCCGTGATCGCCGACTACCACGC 55213 || ||| || ||| ||||||||||| |||||||| || || ||| | | | || Sbjct 171733 GA-CGAGGCGGACAACAAGCTGAACCTGATGATCG--GCAATG--CGCTGCGCATCTGGC 171787 Query 55214 GG----CATCCGACTTCGAGTATTCG---ACGAACGGCAAGGTCGACCCGATCAAGGGCG 55266 || | ||||| || ||| | | |||||||| | | | | |||| Sbjct 171788 GGGAAACGGCCGACAACGCCTATGTGCGTGCCGACGGCAAGCCCTATGAGCTGCCCGGCG 171847 Query 55267 CGTCGCACATCATCTTCACCGACATCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCT 55326 | |||| || |||||| |||| ||||| | | || || ||||| |||||||| Sbjct 171848 CCGCGCAGATGATCTTCTCCGATCTCGGGACC--ATTTCCGT-GGAGAAGAGCCGCGGCT 171904 Query 55327 --TCGACATGAAGGCGTGGATC-GAGAAGCGCCTGA--CGGACGGCGGCGTGCCGCGCGA 55381 ||| | | | || |||||| | || | | |||| || | | ||||||||| ||| Sbjct 171905 TCTCGGCCT-ATCGC-TGGATCAGGGACGAG-CTGATCCGCATG--GGCGTGCCG-GCGT 171958 Query 55382 GC-AGATCGCGTTCATGCGCGACAACAAGGAGCACGCGAAGAAGGAGCGCCTGTTCGCGG 55440 | ||||||| ||||||| ||| ||||| || | | |||| |||||||||||| | Sbjct 171959 CCGAGATCGCCTTCATGCAGGACTACAAGAAGTCGGAGGCGAAGCAGCGCCTGTTCGGCG 172018 Query 55441 ACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATGGAAACCGGCG 55497 || |||||| ||||| ||| | ||||||||| | || |||| ||||||| Sbjct 172019 ACGTGCGCGCCGGCAAGGTTCGCTTCCTGATCGGCTCCTCCGATACGATGGGCACCGGCG 172078 Query 55498 TCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCAT 55557 |||||| |||| ||||| | | | | || || |||| ||| ||| |||| | Sbjct 172079 TCAACGCGCAGCTCCGCCTGAAGGCGCTGCATCACCTCGACGTGCCCTGGCTCCCCTCGC 172138 Query 55558 CCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCGCA 55617 ||| ||||||||||| || ||| || |||||||| ||| || | | | Sbjct 172139 AGATCGCCCAGCGCGAGGGGCGGATCGAGCGCCAGGGCAATCAGCACGACGTCATCGACG 172198 Query 55618 TCCGCGCGTGGGCGA-CGAAGGGCAGCTACGACTCGACCATGTGGGGGATGAACGCCCGC 55676 || ||| | |||| |||||| || |||| | || |||||| || || | ||| Sbjct 172199 TCTTCGCCTATGCGACCGAAGGCTCACT-CGACGCCACGATGTGGCAGAACAATGAGCGC 172257 Query 55677 AAGGCCCGCTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGCTCGCTCGAGGA 55735 ||||| |||||||||| ||||| |||||| || || | ||| || ||||| Sbjct 172258 AAGGCACGCTTCATCGCGGCCGCGCTTTCGGGCGAC-ACCTCGATCCGCCGTCTGGAGGA 172316 Query 55736 CGTGTCCGAGGCATCGGC------GTTCGACATGGCCGCCGCGCTGGCGTCGGGCGACGA 55789 | | ||| | ||| ||||| ||||| ||| | || ||||||||| | Sbjct 172317 CCTCGGCGAAGGCCAGGCCAACCAGTTCGCGATGGCGAAGGCGATCGCATCGGGCGACCA 172376 Query 55790 GCGCTATCTGAAG---ATGGCCGGCCTGAAGGCCGACGTCGAGCGCCTGGAGCGCCTGAG 55846 ||| ||||| | | ||||| || | |||||| ||| ||| || || || || | Sbjct 172377 GCG---TCTGATGCTCAAAGCCGGGCTCGAAGCCGACATCGCGCGGCTCGAACGGCTCCG 172433 Query 55847 CTACGCGCACCACGACGACCA 55867 | |||||| |||||| || Sbjct 172434 CGCCGCGCATATCGACGATCA 172454 Score = 82.4 bits (90), Expect = 3e-11 Identities = 194/285 (68%), Gaps = 11/285 (4%) Strand=Plus/Plus Query 53335 AGGACGTCATCGACGCGCTCGGCACCTCGATCTACGAAGACCCGGCGAAGGGCT---GGC 53391 ||||||| |||| || |||||||| | | |||| | || ||| || | |||| ||| Sbjct 169892 AGGACGTGATCGCCGAGCTCGGCAGCGCCATCTTCCGCGATCCGTCGGACGGCTCCTGGC 169951 Query 53392 AGACGTCGGACGCGTACCTTTCGGGCAACGTCGTGCGCAAA-CTCGCCGAGGCGCAGGCC 53450 ||| | ||||| || || || ||| ||| || |||| |||| || ||| ||||| Sbjct 169952 AGAGCGCCGACGCCTATCTCTCCGGCGCGGTCC-GCTCAAAGCTCGTCGCGGCCGAGGCC 170010 Query 53451 GCCGC-GCGCAGCGACCGCAAGTATCAGCGCAACGTCGAGGCGCTGCTGGCCGTGCAGCC 53509 || | || | ||| | || ||||||| |||| |||||||| | |||||||| Sbjct 170011 GCGGTAGCTCT-CGATCCAGCCTACGAGCGCAATGTCGCGGCGCTGCGCGATGTGCAGCC 170069 Query 53510 GAAGCCG--CTCGGCCCGACCGACATCACGGTGAAGCTCGGCCAAAACTGGATTCCGGCC 53567 |||| ||| | || | |||||||||| | ||||||| |||||||||||| Sbjct 170070 C--GCCGATCTCAGGCCCTCGGACATCACGGCGCGGCTCGGCGCGCCGTGGATTCCGGCC 170127 Query 53568 AGCGACGTCGCCGCGTTCGCGAGCGAGGCGCTGAACGAGAACATC 53612 |||| || ||| |||| | ||| || || || | ||||| Sbjct 170128 GACGACATCATCGCCTTCGTCAAGGAGACGATGGGCGCGGACATC 170172 >seq11465 Length=2819 Score = 118 bits (130), Expect = 4e-22 Identities = 229/328 (70%), Gaps = 29/328 (9%) Strand=Plus/Minus Query 24436 AACGTCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTC 24495 || || ||||| || || ||||||| |||||| |||||| | ||| | || |||| Sbjct 2715 AATGTGATCCTCAAAGCGCGCCAGCGCGGCTTCACCACCTTCATCCAGCTGTTCATGCTC 2656 Query 24496 GACCAC-GCGCTGTTCAACGCGAACAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGAC 24554 ||| | ||| | |||||||| |||| ||||||||| | ||| | | Sbjct 2655 GACGCCTGCG-TCTTCAACGC------------CGGCTCCATCGCCCACA--CGCT-GTC 2612 Query 24555 GGCCG---AGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGC 24611 || || ||| |||||| || ||||||||| || |||| |||||||||||||| | Sbjct 2611 GGACGCGCAGGTGATCTTCCGCGACAAGGTGCGTTTTCCCTATGACAACCTGCCCGACG- 2553 Query 24612 GCTGCGCGACGC-GATGCCGCTCGCCAACTGCA-CGC-AGTCTGAGATGCTGTTCGGGCA 24668 || | |||| | | || ||| ||| || ||| ||| ||| ||||| |||| | Sbjct 2552 GCATCAAGACGGTGGTCCCCATCGTGAACGACAACGCCAGT--GAGTTGCTGCTCGGCAA 2495 Query 24669 CAACAACAGCTCGATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCA 24728 |||| | || ||||||||| |||| ||| ||||| ||||||| | || |||||| Sbjct 2494 CAACTCCGGC---ATCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTGCAGTACCTGCA 2438 Query 24729 CGTCTCCGAGTTCGGGAAGATCTGTGCC 24756 ||||||||| | ||| |||||||| ||| Sbjct 2437 CGTCTCCGAATACGGCAAGATCTGCGCC 2410 >seq2892 Length=791 Score = 111 bits (122), Expect = 6e-20 Identities = 93/114 (82%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 31056 GAAGGCGCCAAGAACCCGATCTTCAAGGGCGGGCTCGGCATGATCAACAACGTCGTGCTG 31115 ||||||||||||||||||||||||| ||||| | | ||| | |||| ||||| | ||| Sbjct 445 GAAGGCGCCAAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTG 386 Query 31116 CACAAGCACCGCAACTGCATCCGCTTCAACGACTACGGCGCGGGCGCCAACGTC 31169 ||||||||||||||| || |||||| ||||||||| || ||||| ||| || Sbjct 385 CACAAGCACCGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332 >seq10271 Length=310985 Score = 87.8 bits (96), Expect = 7e-13 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 7204 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGTA 7263 |||| |||||||||||||| |||||| || | | ||||| || ||||| || || ||| Sbjct 222560 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 222619 Query 7264 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTT 7299 ||||| ||||||||| |||| |||||||| || || Sbjct 222620 TCGTGGGTTCGAATCCCACCCTCTCCGCCATTTGTT 222655 >seq9481 Length=228138 Score = 87.8 bits (96), Expect = 7e-13 Identities = 185/265 (70%), Gaps = 12/265 (5%) Strand=Plus/Minus Query 54643 CGAAGAAGCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGG 54702 ||||||| || ||||| ||||| || ||||| |||||||||||||| || ||| | | Sbjct 7428 CGAAGAACCCCGGCCGGGCGCTGGTGCTGGCGTCTGGCACGCCGATCACCAATACGCTCG 7369 Query 54703 GCGAGCTGTTCACGGTGCAACGCTTCTTCCAGCCCGAGCAG--ATGGCCGAGGACGGTCT 54760 ||||| ||||| || | || ||| || | | || || | | |||||| ||| || Sbjct 7368 GCGAGATGTTCTCGATCCAGCGC--CTGCTCGGCCACGCTGCTCTCGCCGAGCGCGGGCT 7311 Query 54761 GGACACGTTCGACGCGTGGGCGAACCAGTACGGCG--ACGTCGTGGCGGGCTTCGAGCAG 54818 | | |||||| || |||||| | | ||||| ||| || || || ||||| Sbjct 7310 GCATGAGTTCGATGCCTGGGCGTCCTGCTTCGGCGATACGACG-ACCGAGC-TCGAGATC 7253 Query 54819 AACGCGGCGGGCGGCTATGAAGTC-GTCAGCCGCTTCGCGAAGTTCCAGAACGTGCCGGA 54877 | || ||||| || ||| | |||||||||||||| ||| ||||||||||| Sbjct 7252 CAGCCGTCGGGCAAATA-CAAGCCGGTCAGCCGCTTCGCCTCCTTCGTCAACGTGCCGGA 7194 Query 54878 GCTGATGCGCCGCG-TGCGCTCGTT 54901 |||||| |||| | | |||||||| Sbjct 7193 GCTGAT-CGCCATGTTCCGCTCGTT 7170 >seq9020 Length=152994 Score = 87.8 bits (96), Expect = 7e-13 Identities = 200/298 (67%), Gaps = 5/298 (2%) Strand=Plus/Minus Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178 ||||||||| ||||| || || ||||||||||| |||||||| || | |||| |||| Sbjct 67977 CGTCAACAAGGTCATTCTAGTGGGCAATCTCGGGGCCGACCCCGAGATCCGCAGCCTCGG 67918 Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238 |||||| || ||||| | || |||| || | || || |||| Sbjct 67917 CTCGGGCGACCGCGTCGCCAATCTGCGCATCGCCACCTCGGAAACCTGGCGGGACCGCAA 67858 Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTT---CGGCCGCCT 9295 ||||||||| |||||| ||||||||||||||| |||| |||| || | || Sbjct 67857 CAGCGGCGAGCGCAAGGAGCGGACCGAGTGGCACCGGGTCGTGATCTTCAACGACAATCT 67798 Query 9296 CGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGGG-GCGCA 9354 | || ||| ||| | | || ||||| ||| | | ||||| |||||||| ||| | Sbjct 67797 GGTGAAGGTCGCCGAGCAATATCTGCGCAAAGGCTCGACCGTCTATATCGAGGGCGCG-A 67739 Query 9355 TCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGT 9412 || |||| || || ||| || | || ||| || ||| ||||||| ||||| Sbjct 67738 TCCAGACCCGCAAATGGACCGACAATTCGGGCGTCGAGAAGTACTCGACCGAAATCGT 67681 >seq13842 Length=4973 Score = 86.0 bits (94), Expect = 3e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 7204 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGTA 7263 |||| |||||||||||||| |||||| || | | ||||| || ||||| || || ||| Sbjct 407 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 348 Query 7264 TCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293 ||||| ||||||||| |||| |||||||| Sbjct 347 TCGTGGGTTCGAATCCCACCCTCTCCGCCA 318 >seq8237 Length=506431 Score = 86.0 bits (94), Expect = 3e-12 Identities = 77/97 (79%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 7197 CGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGT 7256 || ||||||| ||||||||||| ||| ||||||| ||| |||||| | | | |||| Sbjct 133642 CGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACGGACGAGGGTGT 133583 Query 7257 GAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293 ||| ||||||||||||||||||||| ||||||| Sbjct 133582 GAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 133546 >seq13715 Length=7744 Score = 84.2 bits (92), Expect = 9e-12 Identities = 145/203 (71%), Gaps = 11/203 (5%) Strand=Plus/Plus Query 49803 GGAATGGAGCGC-TTCGCGCCCGAGTCCGGCACGCTCGGCATTCCGCGCGCAGAAATGCC 49861 ||| |||||||| || || || | | | || || || ||| | |||||||| | ||||| Sbjct 898 GGAGTGGAGCGCCTTTGCCCCTGTGACGGGTACCCTGGGCGTGCCGCGCGCTCAGATGCC 957 Query 49862 GCAGGTGCCGACGCA----ATCGCACGGCGCGCTCGTCAACCACCTGAACGCGCAGGGCA 49917 |||| | ||| ||| ||||| || || || ||||| |||||| |||| ||||| Sbjct 958 GCAGAT-CCG-CGCTGAGCATCGC--GGTGCCCTGGTCAATTTCCTGAAGGCGCGGGGCA 1013 Query 49918 TCGAGCACGAAACGA-AGATGGTGCCGGCGGCCGAGCTGAAGCCGACGCAGGCCGAGTTC 49976 |||| | | || ||| | |||| || | ||| || || ||||||||||| || ||| Sbjct 1014 TCGACAGCAAGGCGGCAGA-GATGCCAGCTGGCGACCTAAAACCGACGCAGGCGGAATTC 1072 Query 49977 TCGCCCGAGAAGGTCGAGCAGGC 49999 ||||||| |||||||| || Sbjct 1073 TCGCCCGCCCGTGTCGAGCAAGC 1095 >seq7835 Length=204203 Score = 84.2 bits (92), Expect = 9e-12 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 7203 TGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGT 7262 |||| ||||||||||| ||| ||||||| ||| |||||| ||| | ||||||| Sbjct 60564 TGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCC 60623 Query 7263 ATCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293 ||||||||||||||||||||| ||||||| Sbjct 60624 TCCGTGAGTTCGAATCTCACCGCTTCCGCCA 60654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200526390322524