Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_012743.2
Length=62715
Score E
Sequences producing significant alignments: (Bits) Value
seq9587 435 1e-117
seq10635 392 1e-104
seq11465 118 4e-22
seq2892 111 6e-20
seq10271 87.8 7e-13
seq9481 87.8 7e-13
seq9020 87.8 7e-13
seq13842 86.0 3e-12
seq8237 86.0 3e-12
seq13715 84.2 9e-12
seq7835 84.2 9e-12
>seq9587
Length=50143
Score = 435 bits (482), Expect = 1e-117
Identities = 814/1168 (70%), Gaps = 41/1168 (4%)
Strand=Plus/Minus
Query 24380 TGCCCTTCCGCCCGAACCGCGCGCAACGCCGGCTCCTGCGACGCCTCTGGCACCGCAACG 24439
|||||||||| || || |||||||| || || | | || |||||||||||||||
Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357
Query 24440 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTCGACC 24499
||||||||||||| || ||||| ||||| |||||||||||| |||| | ||||| ||||
Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297
Query 24500 ACGCGCTGTTCAACGCGAA-CAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGACGGCC 24558
| ||||||||||| ||| | |||| | |||||||||||||| || | ||||| | |||
Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238
Query 24559 GAGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGCGC 24618
||||| ||||| |||||||||||||||| ||||||||| ||||||||||||| | | ||
Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCGA 14178
Query 24619 GACGCGATGCCGCTCGCCAACTGCA-CGCAGTCTGAGATGCTGTTCGGGCACAACAACAG 24677
||| | || || | | || || || ||| ||||||||| |||||||||||
Sbjct 14177 GACCGCTTCCCCCTGGAGCGCGACAGTGCCGT-GGAGCTGCTGTTCGCCCACAACAACAG 14119
Query 24678 CTCGATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCACGTCTCCGA 24737
| | ||||| || ||||| |||| ||||||||||| || || |||||||||||
Sbjct 14118 CAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGTCTCCGA 14059
Query 24738 GTTCGGGAAGATCTGTGC-CGAGGCGCCGCTGAAGGCCAAGGAGATCGTGACCGGCTCGA 24796
| || ||||||| || || | |||| |||||||||||| | |||||||||| |
Sbjct 14058 ACTGGGCAAGATCTCGGCACGCTTC-CCGCATAAGGCCAAGGAGGTGATGACCGGCTCCA 14000
Query 24797 TCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCGCGAGG 24856
| ||||||||||| | | ||||| ||||| |||||| |||||||||||| | | |
Sbjct 13999 TTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGCCAACG 13940
Query 24857 GCGAGTTCTACGAGATCACGATGCGCGCCGAGGCGACCGCGCAGCA-GGGCAGACCGCTC 24915
||||||||||| | | | ||| |||||||| | || | || | || |||
Sbjct 13939 GCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGC-CCTGCACTACACGCACAAGAAGCTG 13881
Query 24916 ACGCCGCGCGACTACCGATTCCACTTCTATCCGTGGTGGCAGGCGCCCGAGTACCGCATG 24975
| ||||||||||| || ||||||||||| |||||||||||| |||| | |||||||||
Sbjct 13880 AGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTACCGCATG 13821
Query 24976 GACGCCG--CTGG-CGTCGTCATCACCGAGAAGGACCGGCAATACTTCGAGACGATCGAG 25032
||||| | |||| | ||| |||| || || | || ||||| | |||||
Sbjct 13820 GACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCAC---GACTATTTCGACCAGGTCGAG 13764
Query 25033 ---GCGAAGCACGGCATCACGATCGATGCCGAGCAGCGCGCTTGGTACGTCGCAACCCGC 25089
| || ||| | ||| |||||| || ||||| || ||||| || || ||||
Sbjct 13763 GTCGAGATGCAGTG---CACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCCACCCAG 13707
Query 25090 GACGCCGACTTCTCCGGCAACGAGGAACGTATGTGGCAGGAATACCCGTCGACGCCCGAG 25149
|| || |||||| |||| || || ||||||||||| ||||| || ||||| |
Sbjct 13706 GAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACGCCGGCC 13647
Query 25150 GAACCGTTCAAGGTTTCCACGGAGGGCACCTACTACGCGCAGCAGCTCGCCACG---GCG 25206
|| | ||| || |||| | |||| |||||||| || |||| | |||
Sbjct 13646 GAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAG------GCCATGGTTGCG 13593
Query 25207 CGCAAGAATGGACGCTTCAAGCAGTCCCTGCCCGTCCTGACCAACGTGCCGTGCTTCACC 25266
| || ||| | || || || |||||| ||| | ||||| || |||
Sbjct 13592 CTCACGAAGCGCGGCGGCATCACCTCGGTGCCCGAGCTG---GATCTGCCGGTCTACACA 13536
Query 25267 TTCTGGGACATCGGCAACAGCGACGGCACGGCTATCTGGGTGCTCCAG-CGCATCGAGCA 25325
|||||||| ||||| | ||||| ||||| |||||| | | ||| | | || |
Sbjct 13535 TTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTGCGCG-G 13477
Query 25326 CGAGTGGCGCGCGATCCGCTTCAAGGAAG-GCTGGGGCGAGCCCTACAGCTTCTTCGTGA 25384
|||| ||| ||| || | | || | || | | || ||| | || || ||||
Sbjct 13476 CGAGGACCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-ACTACGTGC 13418
Query 25385 AGTGGCTGCAAGGGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGACGCGGACC 25444
||||| || |||||| ||||| | | | ||||||||||| |||||| | |
Sbjct 13417 GCCACCTGCAGGGCCTCGGCTACGTGTTCGGCGGGCACTTCCTGCCGCATGACGCGAATC 13358
Query 25445 ACGTGCGCCAAGGGCAGACGACGAACAAGAGCC-CGAAGCAGATGCTCGAGGAGCTGATG 25503
|| ||||| | || || || ||| || || | |||||| ||| ||| |||||||
Sbjct 13357 ACAAGCGCC-TGAGC-GA-TACCAAC-CGATCCACAAAGCAGCAGCTGCAGGCGCTGATG 13302
Query 25504 CCGGGCGTGCGGTTCGAGATCGTGCCGC 25531
|||||| ||| || | | | || ||||
Sbjct 13301 CCGGGCCAGCGCTTTGTGGTGGTTCCGC 13274
>seq10635
Length=172665
Score = 392 bits (434), Expect = 1e-104
Identities = 1395/2121 (66%), Gaps = 88/2121 (4%)
Strand=Plus/Plus
Query 53793 ACCGAGAAGGCCAACGACGTCGCT-CAGAAGATGCGCGCCGCGTTC-AGCCGCTGGATTT 53850
|||||| ||| || || | ||| |||||||| |||||||| || | |||||| |
Sbjct 170376 ACCGAGGCGGCGAAAGA-GAAGCTGCAGAAGATCAAGACCGCGTTCCAGAC-CTGGATCT 170433
Query 53851 GGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTTC-AACAAC 53909
|||| ||| | | ||| |||| ||||| | || || || |||| ||||||
Sbjct 170434 GGACCGACCCCGATCGCACCGATCGGCTGGGGCGGGTGTATAAAGACCCCTTCTAACAAC 170493
Query 53910 ATCGCCCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTGTCGCTGCG-CTT 53968
|||| |||||| |||||||||||||| |||| ||||||||||| || | ||| |||
Sbjct 170494 ATCGTGCCGCGCGCCTTCGACGGCTCGCATCTGAAGCTGCCGGGCGCATC-CGGCGCCTT 170552
Query 53969 CGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGCGATATGTA 54028
|| || ||| |||||||||||| |||||||||| ||| | |||| | ||
Sbjct 170553 CGTGCTCTACGATCACCAGAAGCGCGGCATCTGGCGCATCATCGCCGCGGGCGCGACCTA 170612
Query 54029 CCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACCGGCATGGAGGA 54088
|||||| ||||| |||||||| ||||| || | |||||| || || ||||||| |
Sbjct 170613 CCTCGCCCACGCCGTCGGCGCCGGCAAAACCATGACGATGGCGGCCGCCATCATGGAGCA 170672
Query 54089 GCGCCGGCTGGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATGCTGGCGCA 54148
||||||||| |||||| | |||| ||||| | |||||| || ||||||||
Sbjct 170673 GCGCCGGCTTGGCCTGATCGCCAAGGCGATGCTTGTGGTGCCCGGTCATTGCCTGGCGCA 170732
Query 54149 ATTCGCGCGCGAGTTTCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCGGACGAGCA 54208
||||||||| ||||| | ||| || ||| ||| |||| | ||||| ||||||
Sbjct 170733 GGCCGCGCGCGAATTTCTGGCGCTCTATCCGAACGCCCGCATCCTCGTCGCCGACGAGAC 170792
Query 54209 GAATTTCCACACGCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAACAACCCGGA 54268
|| ||| || | |||| || | || ||| | ||| ||| ||| | | | |||
Sbjct 170793 CAACTTCAGCAAGGACAAGCGGCAGCGCTTCTTATCGCGGGCGGCGACCGCGACCTGGGA 170852
Query 54269 CGCGATCATCATCACGCACTCGGCGTTCGGTCGCATCGGCATGTCCGACGAGTAT-GCGT 54327
|||||||||||||||||||||||| ||| | ||||||| || ||| || | | | |
Sbjct 170853 CGCGATCATCATCACGCACTCGGCCTTCCGCTTCATCGGCGTG-CCGTCGGCTTTCGAGC 170911
Query 54328 CGCAGTTCATCAGCGACCAGATCGACGAGTGGAAAACCGCGCTCGCCGAGACGGACAAGA 54387
|||| | ||| ||| || | || | | || | | || || || |||
Sbjct 170912 AGCAGATGATCCAGGACGAGCTGGAGCTCTACGAGACGCTGTTGACCAAGGTCGA-AAGC 170970
Query 54388 G-CGACCGCATCACGCGTAAGCAGATCGAGCGCCGTATCGAGCAGCTCGAACGCCGGCTG 54446
| ||| ||| || |||| |||| |||| || | | ||| || || || |||
Sbjct 170971 GACGATCGCGTCTCGCGCAAGCGCCTCGAACGGCTGAAGGAGGGTCTGAAAGAGCGCCTG 171030
Query 54447 GAGGCAAAGCAGGGCAACGAGAAGAAGGACAAGGTGCTGTCGTTCGAGGAGCTGGGCGTC 54506
||| | || || ||| | ||||| | | || | || |||| | ||||||
Sbjct 171031 GAGTC---GC-TCGCCACGCG--CAAGGATGATCTCCTCACCATCTCGGAGATCGGCGTC 171084
Query 54507 GACCGCCTGTTCGTCGACGAGTTCCACGAATTCCGCAAACTCGACTTCGCGACGCAGCAG 54566
|||| | ||||||||||| || ||||||||||| || |||||| ||| | |
Sbjct 171085 GACCAGATCATCGTCGACGAGGCGCAGGAATTCCGCAAGCTGTCCTTCGCCACG-AATAT 171143
Query 54567 GGCAAC-ATCAAGGGCATCGACCCGGCCGGCTCGCAGCGCGCGATGGACCTGTTCATGAA 54625
| | || | |||||| |||| || |||||||||||| || |||||| | ||||
Sbjct 171144 GTCGACGCTGAAGGGCGTCGATCCCAACGGCTCGCAGCGTGCCTGGGACCTCTATGTGAA 171203
Query 54626 GGCGCAATACCTGCGCTCGAAGAAGCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCC 54685
| | | || | | ||||||| || |||||||||||||| ||||| ||||||||
Sbjct 171204 GTCCCGATTCATCGAAACGAAGAATCCCGGCCGCGCGCTCGTGCTGGCGTCTGGCACGCC 171263
Query 54686 GATCACGAACACGATGGGCGAGCTGTTCACGGTGCAACGCT---TCTTCCAGCCCGAGCA 54742
|||||| |||||| | |||||| ||| ||||||| |||| || | | ||| |
Sbjct 171264 GATCACCAACACGCTCGGCGAGATGTATTCGGTGCAGCGCTATCTCGGCTACGCCGCCC- 171322
Query 54743 GATGGCCGAGGACGGTCTGGACACGTTCGACGCGTGGGC--GAACCAGTACGGCGACGTC 54800
| |||| || || || ||||||||| ||||| |||| | ||||||||||
Sbjct 171323 --TCCGCGAGCGGGGCTTGCACGAGTTCGACGCCTGGGCCTCAACC--TTCGGCGACGTC 171378
Query 54801 GTGGCGGGCTTCGAGCAGAACGCGGCGGGCGGCTATGAAGTC-GTCAGCCGCTTCGCGAA 54859
| | | |||||| | | | ||| | || ||| | |||| ||||||||||
Sbjct 171379 TCGACCGAGCTCGAGCTTCAGCCCTCCGGCAGATA-CAAGCCGGTCACGCGCTTCGCGAC 171437
Query 54860 GTTCCAGAACGTGCCGGAGCTGATGCGCCGCG-TGCGCTCGTTCATGGACATCCTGACGA 54918
||| || || || |||||||| |||| | | || || ||| ||| | | | |
Sbjct 171438 CTTCGTCAATGTCCCCGAGCTGAT-CGCCATGTTCCGGTCCTTCGCCGACGTGGTCATGG 171496
Query 54919 GCTCGCAGCTCTCGCAG-TACGTCGACCGCCCGGCGATCGATGGCGGCGGCCGTCAGGTC 54977
| | || ||| | ||||| | ||||||||| |||| || ||| ||
Sbjct 171497 CGGAGGACCT-GCGCCGATACGTGAAGATTCCGGCGATCTCGACCGGCAAGCGCCAGATC 171555
Query 54978 ATGGTCACGCCGGAGC---CGTTCGGCTACAAGGCGTACCAGAAGGCGCTCGAGCAGCGC 55034
||| ||| || ||| || || || |||| |||||| |||||| ||||
Sbjct 171556 ATG---ACGGCGAAGCCGACGGCCGCCTTCAAGCGTTACCAGGTCCAGCTCGATGCGCGC 171612
Query 55035 ATCACCGCGATCCGCAACCGCAAGGGCCCGCCGAAGAAGGGCGAGGACATCATCCTGAAC 55094
|||| |||||| | ||| | | |||||| || ||||| |||||| | || |
Sbjct 171613 ATCAAGGCGATCGAGATGCGCGACCGTCCGCCGGAGCCAGGCGACGACATCCTGCTCTCC 171672
Query 55095 GTGATCGCGGACGGCCGTTTCTCCGCGATCGACATGCGCTTCGTTGA-CCCGACCGCGCC 55153
|| ||| | |||||||| ||||||||||| | ||| | || || || ||| | |
Sbjct 171673 GTCATCACCGACGGCCGCCATGCCGCGATCGACCTTCGCCTTGTCGATCCGGACAATGAC 171732
Query 55154 GAGCGACCCGAACAGCAAGCTGAACCAGATGATCGACGCCGTGATCGCCGACTACCACGC 55213
|| ||| || ||| ||||||||||| |||||||| || || ||| | | | ||
Sbjct 171733 GA-CGAGGCGGACAACAAGCTGAACCTGATGATCG--GCAATG--CGCTGCGCATCTGGC 171787
Query 55214 GG----CATCCGACTTCGAGTATTCG---ACGAACGGCAAGGTCGACCCGATCAAGGGCG 55266
|| | ||||| || ||| | | |||||||| | | | | ||||
Sbjct 171788 GGGAAACGGCCGACAACGCCTATGTGCGTGCCGACGGCAAGCCCTATGAGCTGCCCGGCG 171847
Query 55267 CGTCGCACATCATCTTCACCGACATCGGGCTCGGCGAGCAGTCGGCGAAGAACCGCGGCT 55326
| |||| || |||||| |||| ||||| | | || || ||||| ||||||||
Sbjct 171848 CCGCGCAGATGATCTTCTCCGATCTCGGGACC--ATTTCCGT-GGAGAAGAGCCGCGGCT 171904
Query 55327 --TCGACATGAAGGCGTGGATC-GAGAAGCGCCTGA--CGGACGGCGGCGTGCCGCGCGA 55381
||| | | | || |||||| | || | | |||| || | | ||||||||| |||
Sbjct 171905 TCTCGGCCT-ATCGC-TGGATCAGGGACGAG-CTGATCCGCATG--GGCGTGCCG-GCGT 171958
Query 55382 GC-AGATCGCGTTCATGCGCGACAACAAGGAGCACGCGAAGAAGGAGCGCCTGTTCGCGG 55440
| ||||||| ||||||| ||| ||||| || | | |||| |||||||||||| |
Sbjct 171959 CCGAGATCGCCTTCATGCAGGACTACAAGAAGTCGGAGGCGAAGCAGCGCCTGTTCGGCG 172018
Query 55441 ACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATGGAAACCGGCG 55497
|| |||||| ||||| ||| | ||||||||| | || |||| |||||||
Sbjct 172019 ACGTGCGCGCCGGCAAGGTTCGCTTCCTGATCGGCTCCTCCGATACGATGGGCACCGGCG 172078
Query 55498 TCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGCAT 55557
|||||| |||| ||||| | | | | || || |||| ||| ||| |||| |
Sbjct 172079 TCAACGCGCAGCTCCGCCTGAAGGCGCTGCATCACCTCGACGTGCCCTGGCTCCCCTCGC 172138
Query 55558 CCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCGCA 55617
||| ||||||||||| || ||| || |||||||| ||| || | | |
Sbjct 172139 AGATCGCCCAGCGCGAGGGGCGGATCGAGCGCCAGGGCAATCAGCACGACGTCATCGACG 172198
Query 55618 TCCGCGCGTGGGCGA-CGAAGGGCAGCTACGACTCGACCATGTGGGGGATGAACGCCCGC 55676
|| ||| | |||| |||||| || |||| | || |||||| || || | |||
Sbjct 172199 TCTTCGCCTATGCGACCGAAGGCTCACT-CGACGCCACGATGTGGCAGAACAATGAGCGC 172257
Query 55677 AAGGCCCGCTTCATCGAACAGGCGCTCAACGGCGACGACAGCG-TGCGCTCGCTCGAGGA 55735
||||| |||||||||| ||||| |||||| || || | ||| || |||||
Sbjct 172258 AAGGCACGCTTCATCGCGGCCGCGCTTTCGGGCGAC-ACCTCGATCCGCCGTCTGGAGGA 172316
Query 55736 CGTGTCCGAGGCATCGGC------GTTCGACATGGCCGCCGCGCTGGCGTCGGGCGACGA 55789
| | ||| | ||| ||||| ||||| ||| | || ||||||||| |
Sbjct 172317 CCTCGGCGAAGGCCAGGCCAACCAGTTCGCGATGGCGAAGGCGATCGCATCGGGCGACCA 172376
Query 55790 GCGCTATCTGAAG---ATGGCCGGCCTGAAGGCCGACGTCGAGCGCCTGGAGCGCCTGAG 55846
||| ||||| | | ||||| || | |||||| ||| ||| || || || || |
Sbjct 172377 GCG---TCTGATGCTCAAAGCCGGGCTCGAAGCCGACATCGCGCGGCTCGAACGGCTCCG 172433
Query 55847 CTACGCGCACCACGACGACCA 55867
| |||||| |||||| ||
Sbjct 172434 CGCCGCGCATATCGACGATCA 172454
Score = 82.4 bits (90), Expect = 3e-11
Identities = 194/285 (68%), Gaps = 11/285 (4%)
Strand=Plus/Plus
Query 53335 AGGACGTCATCGACGCGCTCGGCACCTCGATCTACGAAGACCCGGCGAAGGGCT---GGC 53391
||||||| |||| || |||||||| | | |||| | || ||| || | |||| |||
Sbjct 169892 AGGACGTGATCGCCGAGCTCGGCAGCGCCATCTTCCGCGATCCGTCGGACGGCTCCTGGC 169951
Query 53392 AGACGTCGGACGCGTACCTTTCGGGCAACGTCGTGCGCAAA-CTCGCCGAGGCGCAGGCC 53450
||| | ||||| || || || ||| ||| || |||| |||| || ||| |||||
Sbjct 169952 AGAGCGCCGACGCCTATCTCTCCGGCGCGGTCC-GCTCAAAGCTCGTCGCGGCCGAGGCC 170010
Query 53451 GCCGC-GCGCAGCGACCGCAAGTATCAGCGCAACGTCGAGGCGCTGCTGGCCGTGCAGCC 53509
|| | || | ||| | || ||||||| |||| |||||||| | ||||||||
Sbjct 170011 GCGGTAGCTCT-CGATCCAGCCTACGAGCGCAATGTCGCGGCGCTGCGCGATGTGCAGCC 170069
Query 53510 GAAGCCG--CTCGGCCCGACCGACATCACGGTGAAGCTCGGCCAAAACTGGATTCCGGCC 53567
|||| ||| | || | |||||||||| | ||||||| ||||||||||||
Sbjct 170070 C--GCCGATCTCAGGCCCTCGGACATCACGGCGCGGCTCGGCGCGCCGTGGATTCCGGCC 170127
Query 53568 AGCGACGTCGCCGCGTTCGCGAGCGAGGCGCTGAACGAGAACATC 53612
|||| || ||| |||| | ||| || || || | |||||
Sbjct 170128 GACGACATCATCGCCTTCGTCAAGGAGACGATGGGCGCGGACATC 170172
>seq11465
Length=2819
Score = 118 bits (130), Expect = 4e-22
Identities = 229/328 (70%), Gaps = 29/328 (9%)
Strand=Plus/Minus
Query 24436 AACGTCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACCCTGATCTGCATCATCTGGCTC 24495
|| || ||||| || || ||||||| |||||| |||||| | ||| | || ||||
Sbjct 2715 AATGTGATCCTCAAAGCGCGCCAGCGCGGCTTCACCACCTTCATCCAGCTGTTCATGCTC 2656
Query 24496 GACCAC-GCGCTGTTCAACGCGAACAGCCGGTGCGGCATCATCGCCCAGAACCGCGAGAC 24554
||| | ||| | |||||||| |||| ||||||||| | ||| | |
Sbjct 2655 GACGCCTGCG-TCTTCAACGC------------CGGCTCCATCGCCCACA--CGCT-GTC 2612
Query 24555 GGCCG---AGGCGATCTTTCGGGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGC 24611
|| || ||| |||||| || ||||||||| || |||| |||||||||||||| |
Sbjct 2611 GGACGCGCAGGTGATCTTCCGCGACAAGGTGCGTTTTCCCTATGACAACCTGCCCGACG- 2553
Query 24612 GCTGCGCGACGC-GATGCCGCTCGCCAACTGCA-CGC-AGTCTGAGATGCTGTTCGGGCA 24668
|| | |||| | | || ||| ||| || ||| ||| ||| ||||| |||| |
Sbjct 2552 GCATCAAGACGGTGGTCCCCATCGTGAACGACAACGCCAGT--GAGTTGCTGCTCGGCAA 2495
Query 24669 CAACAACAGCTCGATCCGCGTCGCGACGTCGGTGCGCGGCGGCACGATCCACCGCCTGCA 24728
|||| | || ||||||||| |||| ||| ||||| ||||||| | || ||||||
Sbjct 2494 CAACTCCGGC---ATCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTGCAGTACCTGCA 2438
Query 24729 CGTCTCCGAGTTCGGGAAGATCTGTGCC 24756
||||||||| | ||| |||||||| |||
Sbjct 2437 CGTCTCCGAATACGGCAAGATCTGCGCC 2410
>seq2892
Length=791
Score = 111 bits (122), Expect = 6e-20
Identities = 93/114 (82%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 31056 GAAGGCGCCAAGAACCCGATCTTCAAGGGCGGGCTCGGCATGATCAACAACGTCGTGCTG 31115
||||||||||||||||||||||||| ||||| | | ||| | |||| ||||| | |||
Sbjct 445 GAAGGCGCCAAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTG 386
Query 31116 CACAAGCACCGCAACTGCATCCGCTTCAACGACTACGGCGCGGGCGCCAACGTC 31169
||||||||||||||| || |||||| ||||||||| || ||||| ||| ||
Sbjct 385 CACAAGCACCGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332
>seq10271
Length=310985
Score = 87.8 bits (96), Expect = 7e-13
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 7204 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGTA 7263
|||| |||||||||||||| |||||| || | | ||||| || ||||| || || |||
Sbjct 222560 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 222619
Query 7264 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTT 7299
||||| ||||||||| |||| |||||||| || ||
Sbjct 222620 TCGTGGGTTCGAATCCCACCCTCTCCGCCATTTGTT 222655
>seq9481
Length=228138
Score = 87.8 bits (96), Expect = 7e-13
Identities = 185/265 (70%), Gaps = 12/265 (5%)
Strand=Plus/Minus
Query 54643 CGAAGAAGCCGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGG 54702
||||||| || ||||| ||||| || ||||| |||||||||||||| || ||| | |
Sbjct 7428 CGAAGAACCCCGGCCGGGCGCTGGTGCTGGCGTCTGGCACGCCGATCACCAATACGCTCG 7369
Query 54703 GCGAGCTGTTCACGGTGCAACGCTTCTTCCAGCCCGAGCAG--ATGGCCGAGGACGGTCT 54760
||||| ||||| || | || ||| || | | || || | | |||||| ||| ||
Sbjct 7368 GCGAGATGTTCTCGATCCAGCGC--CTGCTCGGCCACGCTGCTCTCGCCGAGCGCGGGCT 7311
Query 54761 GGACACGTTCGACGCGTGGGCGAACCAGTACGGCG--ACGTCGTGGCGGGCTTCGAGCAG 54818
| | |||||| || |||||| | | ||||| ||| || || || |||||
Sbjct 7310 GCATGAGTTCGATGCCTGGGCGTCCTGCTTCGGCGATACGACG-ACCGAGC-TCGAGATC 7253
Query 54819 AACGCGGCGGGCGGCTATGAAGTC-GTCAGCCGCTTCGCGAAGTTCCAGAACGTGCCGGA 54877
| || ||||| || ||| | |||||||||||||| ||| |||||||||||
Sbjct 7252 CAGCCGTCGGGCAAATA-CAAGCCGGTCAGCCGCTTCGCCTCCTTCGTCAACGTGCCGGA 7194
Query 54878 GCTGATGCGCCGCG-TGCGCTCGTT 54901
|||||| |||| | | ||||||||
Sbjct 7193 GCTGAT-CGCCATGTTCCGCTCGTT 7170
>seq9020
Length=152994
Score = 87.8 bits (96), Expect = 7e-13
Identities = 200/298 (67%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 9119 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 9178
||||||||| ||||| || || ||||||||||| |||||||| || | |||| ||||
Sbjct 67977 CGTCAACAAGGTCATTCTAGTGGGCAATCTCGGGGCCGACCCCGAGATCCGCAGCCTCGG 67918
Query 9179 GAGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGC 9238
|||||| || ||||| | || |||| || | || || ||||
Sbjct 67917 CTCGGGCGACCGCGTCGCCAATCTGCGCATCGCCACCTCGGAAACCTGGCGGGACCGCAA 67858
Query 9239 GAGCGGCGAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTT---CGGCCGCCT 9295
||||||||| |||||| ||||||||||||||| |||| |||| || | ||
Sbjct 67857 CAGCGGCGAGCGCAAGGAGCGGACCGAGTGGCACCGGGTCGTGATCTTCAACGACAATCT 67798
Query 9296 CGCCGAGATCGTCGACGAGCACCTTCGCAAGGGCGCATCGGTCTACATCGAGGG-GCGCA 9354
| || ||| ||| | | || ||||| ||| | | ||||| |||||||| ||| |
Sbjct 67797 GGTGAAGGTCGCCGAGCAATATCTGCGCAAAGGCTCGACCGTCTATATCGAGGGCGCG-A 67739
Query 9355 TCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGT 9412
|| |||| || || ||| || | || ||| || ||| ||||||| |||||
Sbjct 67738 TCCAGACCCGCAAATGGACCGACAATTCGGGCGTCGAGAAGTACTCGACCGAAATCGT 67681
>seq13842
Length=4973
Score = 86.0 bits (94), Expect = 3e-12
Identities = 73/90 (81%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 7204 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGTA 7263
|||| |||||||||||||| |||||| || | | ||||| || ||||| || || |||
Sbjct 407 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 348
Query 7264 TCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293
||||| ||||||||| |||| ||||||||
Sbjct 347 TCGTGGGTTCGAATCCCACCCTCTCCGCCA 318
>seq8237
Length=506431
Score = 86.0 bits (94), Expect = 3e-12
Identities = 77/97 (79%), Gaps = 0/97 (0%)
Strand=Plus/Minus
Query 7197 CGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGT 7256
|| ||||||| ||||||||||| ||| ||||||| ||| |||||| | | | ||||
Sbjct 133642 CGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACGGACGAGGGTGT 133583
Query 7257 GAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293
||| ||||||||||||||||||||| |||||||
Sbjct 133582 GAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 133546
>seq13715
Length=7744
Score = 84.2 bits (92), Expect = 9e-12
Identities = 145/203 (71%), Gaps = 11/203 (5%)
Strand=Plus/Plus
Query 49803 GGAATGGAGCGC-TTCGCGCCCGAGTCCGGCACGCTCGGCATTCCGCGCGCAGAAATGCC 49861
||| |||||||| || || || | | | || || || ||| | |||||||| | |||||
Sbjct 898 GGAGTGGAGCGCCTTTGCCCCTGTGACGGGTACCCTGGGCGTGCCGCGCGCTCAGATGCC 957
Query 49862 GCAGGTGCCGACGCA----ATCGCACGGCGCGCTCGTCAACCACCTGAACGCGCAGGGCA 49917
|||| | ||| ||| ||||| || || || ||||| |||||| |||| |||||
Sbjct 958 GCAGAT-CCG-CGCTGAGCATCGC--GGTGCCCTGGTCAATTTCCTGAAGGCGCGGGGCA 1013
Query 49918 TCGAGCACGAAACGA-AGATGGTGCCGGCGGCCGAGCTGAAGCCGACGCAGGCCGAGTTC 49976
|||| | | || ||| | |||| || | ||| || || ||||||||||| || |||
Sbjct 1014 TCGACAGCAAGGCGGCAGA-GATGCCAGCTGGCGACCTAAAACCGACGCAGGCGGAATTC 1072
Query 49977 TCGCCCGAGAAGGTCGAGCAGGC 49999
||||||| |||||||| ||
Sbjct 1073 TCGCCCGCCCGTGTCGAGCAAGC 1095
>seq7835
Length=204203
Score = 84.2 bits (92), Expect = 9e-12
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 7203 TGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGTGAGCGT 7262
|||| ||||||||||| ||| ||||||| ||| |||||| ||| | |||||||
Sbjct 60564 TGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAGTCC 60623
Query 7263 ATCGTGAGTTCGAATCTCACCGCCTCCGCCA 7293
||||||||||||||||||||| |||||||
Sbjct 60624 TCCGTGAGTTCGAATCTCACCGCTTCCGCCA 60654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200526390322524
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |