Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_013085.1
Length=194454
Score E
Sequences producing significant alignments: (Bits) Value
seq9020 93.3 5e-14
seq7041 91.5 2e-13
>seq9020
Length=152994
Score = 93.3 bits (102), Expect = 5e-14
Identities = 76/90 (84%), Gaps = 2/90 (2%)
Strand=Plus/Minus
Query 31291 GCGGAGAGGGTGGGATTCGAACCCACGG-AGGCTTTCACCT-CGCTAGTTTTCAAGACTA 31348
||||| |||||||||||||||||||||| |||||| ||||| || |||||||||||
Sbjct 45683 GCGGACAGGGTGGGATTCGAACCCACGGTAGGCTTCCACCTACGGCGGTTTTCAAGACCG 45624
Query 31349 GAGCCTTCAACCACTCGACCACCTCTCCAT 31378
||||| ||||||||| |||||| |||||
Sbjct 45623 CTGCCTTAAACCACTCGGCCACCTGTCCAT 45594
>seq7041
Length=191181
Score = 91.5 bits (100), Expect = 2e-13
Identities = 62/70 (89%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 32009 TGGCGACTCAAGTAGGATTCGAACCTACGACCGACTGCTTAGAAGGCAGTTGCTCTATCC 32068
||||||| | | |||| |||||||| ||||| |||||||||||||||||||||||||||
Sbjct 50842 TGGCGACCCCTGCAGGACTCGAACCTGCGACCTACTGCTTAGAAGGCAGTTGCTCTATCC 50783
Query 32069 AGCTGAGCTA 32078
|| |||||||
Sbjct 50782 AGTTGAGCTA 50773
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622007692782960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |