Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq13960 96.9 6e-15
>seq13960
Length=3940437
Score = 96.9 bits (106), Expect = 6e-15
Identities = 110/145 (76%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 203917 CCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAATGTT 203976
||| ||||| | |||||| || ||||||| ||| || || || || || |||||
Sbjct 2047745 CCAGCCGTAGAAGTGCATACTAGTGAGTTTGCCATAGTTAGGCTCAGCAATATGTATGTT 2047804
Query 203977 CAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCATATTGATAATGGTCT 204035
|| |||||||||||| || ||| |||||||| | || |||||||| |||| | ||| |
Sbjct 2047805 CAAAGACTGGCTTTGATCAATG-AAGGCGCCTCTCTCGGCGGCCATCTTGAGTACGGTTT 2047863
Query 204036 TCTGCGAAATCTCCCACACCGTCTT 204060
|||| || || |||||||| |||||
Sbjct 2047864 TCTGAGAGATTTCCCACACAGTCTT 2047888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795005521973040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |