Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_014458.1 Length=59598 Score E Sequences producing significant alignments: (Bits) Value seq9463 107 7e-19 >seq9463 Length=63583 Score = 107 bits (118), Expect = 7e-19 Identities = 109/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 53350 GCCTTTCGTTTATCC----GCATGTGGCGCTGATGCCTGATGCGCATTTCGGTAAGGGCA 53405 |||| |||| |||| ||| |||||| ||||||| || | ||| | || | |||| Sbjct 40945 GCCTGCCGTTCATCCACAAGCACGTGGCGGTGATGCCCGACGTGCACTGGGGCATGGGCG 40886 Query 53406 GCAGTGTCGGCACGGTGATCCCGACCGAGGGCGCTGTGATCCCGGCGGCCGTCGGCGTCG 53465 || |||||| |||| |||||||||| || || | ||||||||||| |||||||||| Sbjct 40885 CCACCGTCGGCTCGGTCATCCCGACCGTCGGGGCGATCATCCCGGCGGCGGTCGGCGTCG 40826 Query 53466 ATATTGGCTGCGGCATGATCGC 53487 | || |||||||||||||| || Sbjct 40825 ACATCGGCTGCGGCATGATGGC 40804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190557917266480