Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_014461.1
Length=73453
Score E
Sequences producing significant alignments: (Bits) Value
seq15007 87.8 8e-13
seq7994 82.4 4e-11
>seq15007
Length=612
Score = 87.8 bits (96), Expect = 8e-13
Identities = 68/80 (85%), Gaps = 1/80 (1%)
Strand=Plus/Plus
Query 61289 AGCGGCCTTT-GCCTCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCG 61347
||||| |||| | |||||||||||||||||||||| || |||| |||||| || |||||
Sbjct 238 AGCGGTCTTTCGGGTCGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCG 297
Query 61348 CAGGTTCAAATCCTGCACGG 61367
||||||| | ||| ||||||
Sbjct 298 CAGGTTCGAGTCCCGCACGG 317
>seq7994
Length=80430
Score = 82.4 bits (90), Expect = 4e-11
Identities = 60/70 (86%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 61300 CCTCGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATC 61359
||||| |||||||||||||||||| | ||||| ||||||| |||||||||||| | ||
Sbjct 67717 CCTCGGTAGCTCAGTTGGTAGAGCAGGCGACTGTTAATCGCCGGGTCGCAGGTTCGAGTC 67658
Query 61360 CTGCACGGGG 61369
|||| |||||
Sbjct 67657 CTGCCCGGGG 67648
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 234881683884386
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |