Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq6169 98.7 1e-15 >seq6169 Length=202695 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 9596 AAATTGTTCAGCTGCGCCTTTGTAATCTTTAGCATTGAGTTTCTTGATAAGTGTAGAACC 9655 |||||| | || |||||||| |||||||||||||| | || |||| ||||| || | Sbjct 3187 AAATTGAGCTGCAGCGCCTTTATAATCTTTAGCATTTAACTTTTTGAGTAGTGTTGAGTC 3128 Query 9656 ACCGATCGCACCTACGCCGATATTGTAAGTCAATGAAACTAATGCATCAAATTGATTTTG 9715 | ||||| ||| || |||||||||||||| || || ||||| || |||||||| Sbjct 3127 TTTAAATGCACCAGTGCCAATGTTGTAAGTCAATGATACCAAAGCATCGAACTGATTTTG 3068 Query 9716 AGTTACAGGAACTTGAATGAGTGAACTAACAGCAGGTACGAATTTCTTAAGATCGTTTGC 9775 ||| ||||||| || | | | ||||||| | | |||||||| | ||| | || Sbjct 3067 GTTTAATGGAACTTTAACCGAAGTATTTACAGCAGATTCAAATTTCTTTAAATCTTGAGC 3008 Query 9776 TTTAAACTCATTGGCTTGAGCTTCAGTACATGTATCGCCTTT 9817 | | || ||||| | |||| || ||||| ||||| Sbjct 3007 CATGTAGGACTTAGCTTGTTCAGCAGTGCAAGTATCACCTTT 2966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524870781034920