Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq7282 84.2 3e-11 >seq7282 Length=3089 Score = 84.2 bits (92), Expect = 3e-11 Identities = 68/81 (84%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 113817 TTTGGGGGATTAGCTCAGTTGGAATGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTC 113876 |||||||||||||||||| ||| | |||| ||| ||||||| ||| |||| ||||||| Sbjct 2455 TTTGGGGGATTAGCTCAGCTGGGA-GAGCACCTGCTTTGCAAGCAGGGGGTCGTCGGTTC 2513 Query 113877 GACCCCGATATCCTCCACCAA 113897 || |||| |||||||||||| Sbjct 2514 GATCCCGTCATCCTCCACCAA 2534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752463131553960