Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_015288.1
Length=191195
Score E
Sequences producing significant alignments: (Bits) Value
seq9956 86.0 8e-12
seq9925 86.0 8e-12
>seq9956
Length=123604
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 163497 ATTCCTCTATAGCTCAGTTGGTAGAGCACGGAACTGTTAATTCTGTTGTCCCTGGTTCGA 163556
||||||| |||||||||| ||||||||| | ||||||||| | ||||||||||||||
Sbjct 116395 ATTCCTCGATAGCTCAGTCGGTAGAGCAACGGACTGTTAATCCGTGTGTCCCTGGTTCGA 116454
Query 163557 GTCCAGGTGGAGGAG 163571
| |||||| ||||||
Sbjct 116455 GCCCAGGTCGAGGAG 116469
>seq9925
Length=47282
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 163497 ATTCCTCTATAGCTCAGTTGGTAGAGCACGGAACTGTTAATTCTGTTGTCCCTGGTTCGA 163556
||||||| ||||||||||||||||||| | | ||||||||| | |||||||||||||
Sbjct 28034 ATTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 27975
Query 163557 GTCCAGGTGGAGGAG 163571
| |||||| ||||||
Sbjct 27974 GCCCAGGTTGAGGAG 27960
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 163497 ATTCCTCTATAGCTCAGTTGGTAGAGCACGGAACTGTTAATTCTGTTGTCCCTGGTTCGA 163556
||||||| ||||||||||||||||||| | | ||||||||| | |||||||||||||
Sbjct 28155 ATTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 28096
Query 163557 GTCCAGGTGGAGGAG 163571
| |||||| ||||||
Sbjct 28095 GCCCAGGTTGAGGAG 28081
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 163498 TTCCTCTATAGCTCAGTTGGTAGAGCACGGAACTGTTAATTCTGTTGTCCCTGGTTCGAG 163557
|||||| ||||||||||||||||||| | | ||||||||| | ||||||||||||||
Sbjct 28282 TTCCTCAATAGCTCAGTTGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGAG 28223
Query 163558 TCCAGGTGGAGGAG 163571
|||||| ||||||
Sbjct 28222 CCCAGGTTGAGGAG 28209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611580855874200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |