Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_015569.1
Length=178563
Score E
Sequences producing significant alignments: (Bits) Value
seq9573 95.1 1e-14
seq11622 91.5 2e-13
>seq9573
Length=73825
Score = 95.1 bits (104), Expect = 1e-14
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 149448 TGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAA 149507
|||||||| ||||||||||||||||| || | ||||||| | |||| |||||||||||||
Sbjct 69103 TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGTGGTTCAAA 69162
Query 149508 TCCACCTCCCGC 149519
|||| |||||||
Sbjct 69163 TCCAGCTCCCGC 69174
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 149448 TGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAA 149507
|||||||| ||||||||||||||||| || | ||||||| | |||| || |||||||||
Sbjct 63671 TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGGCGTTGGTTCAAA 63730
Query 149508 TCCACCTCCCGC 149519
|||| |||||||
Sbjct 63731 TCCAGCTCCCGC 63742
>seq11622
Length=276999
Score = 91.5 bits (100), Expect = 2e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 149447 TTGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAA 149506
||||||||| ||||||||||||||||| || | ||||||| | |||| ||| ||||||||
Sbjct 87434 TTGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAA 87493
Query 149507 ATCCACCTCCCGC 149519
||||| |||||||
Sbjct 87494 ATCCAGCTCCCGC 87506
Score = 89.7 bits (98), Expect = 6e-13
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 149448 TGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAA 149507
|||||||| ||||||||||||||||| || | ||||||| | |||| ||| |||||||||
Sbjct 87282 TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA 87341
Query 149508 TCCACCTCCCGC 149519
|||| |||||||
Sbjct 87342 TCCAGCTCCCGC 87353
Score = 86.0 bits (94), Expect = 7e-12
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 149448 TGCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAA 149507
|||||||| ||||||||||||||||| || | ||||||| | |||| || |||||||||
Sbjct 87612 TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGGCGTTGGTTCAAA 87671
Query 149508 TCCACCTCCCGC 149519
|||| |||||||
Sbjct 87672 TCCAGCTCCCGC 87683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571166064885720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |