Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_015938.1 Length=89916 Score E Sequences producing significant alignments: (Bits) Value seq9673 82.4 4e-11 >seq9673 Length=4878 Score = 82.4 bits (90), Expect = 4e-11 Identities = 73/90 (81%), Gaps = 1/90 (1%) Strand=Plus/Plus Query 2448 GAAATTACGTTTCCATAGCTTAAC-GGATAGAGCAACAGCCTTCTAAGCTGTCGGTTGAA 2506 ||| | ||| | || ||||| | | ||||||||||||||||||||||||||| ||| | Sbjct 478 GAAGTAACGGTCCCGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCTGTGGGTCACA 537 Query 2507 GGTTCGAATCCTTCTGGGAACGCCATACAA 2536 |||||||||||| |||| ||||||| || Sbjct 538 GGTTCGAATCCTGTCGGGATCGCCATAAAA 567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 287553615148023