Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_016448.1
Length=196691
Score E
Sequences producing significant alignments: (Bits) Value
seq12743 84.2 3e-11
>seq12743
Length=996736
Score = 84.2 bits (92), Expect = 3e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 2259 TGCGAGATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCTCCTTCAAATGG 2318
|| |||||||| |||||||| ||||| ||| |||| ||||| ||| |||| ||| |||
Sbjct 709494 TGTGAGATCCAGCTGACCTGCTCTGTGGAGAATCCAAATGATAACGTCTCACTCAGGTGG 709435
Query 2319 GAGGCCTTGGGCAAGACGCTTCTACGCGAGCCCAACCTCACGACCTCCTGGGACCCCAGG 2378
||| | || || | || | || | || ||| | | ||||||||||||| |
Sbjct 709434 CAGGTCGCAGGAAATCCATATCATAGTGAAGCAAATCTCTCTATATCCTGGGACCCCAAG 709375
Query 2379 AACAGCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTGAGCAATCTCTCTTTC 2438
| | |||||| ||| |||||| ||||| || || || |||| ||| | | || | |
Sbjct 709374 AGCCTCAGTGAAGAGACCTACACCTGCATAGCTGAGAATCCTGTCAGCTCTTTATCCTCC 709315
Query 2439 ACGGTCTCGGCCCAGA 2454
| ||||| | | |||
Sbjct 709314 TCTGTCTCTGACAAGA 709299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629164745303640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |