Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_016650.1
Length=48072
Score E
Sequences producing significant alignments: (Bits) Value
seq9910 86.0 2e-12
seq11622 82.4 2e-11
>seq9910
Length=308115
Score = 86.0 bits (94), Expect = 2e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 46650 TAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCCG 46709
||||||||||||||||| | ||||||||||| ||| ||||||||||||||| |||||
Sbjct 49792 TAGCTCAATTGGTAGAGTATCGGTCTCCAAAACCGAGGGTTGGGGGTTCGAGACCCTCTT 49733
Query 46710 GGCCTGCAAA 46719
||||||| ||
Sbjct 49732 GGCCTGCCAA 49723
>seq11622
Length=276999
Score = 82.4 bits (90), Expect = 2e-11
Identities = 59/68 (87%), Gaps = 0/68 (0%)
Strand=Plus/Plus
Query 46649 GTAGCTCAATTGGTAGAGCACCGGTCTCCAAAGCCGGTGGTTGGGGGTTCGAGTCCCTCC 46708
|||| |||||||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct 94 GTAGTTCAATTGGTAGAGCGTCGGTCTCCAAAACCGAATGTTGGGGGTTCGAGTCCCTCC 153
Query 46709 GGGCCTGC 46716
| |||||
Sbjct 154 TGACCTGC 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 153681312927772
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |