Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_016762.1
Length=49135
Score E
Sequences producing significant alignments: (Bits) Value
seq12569 848 0.0
seq6089 673 0.0
seq7029 145 2e-30
seq12095 120 1e-22
seq14232 113 1e-20
seq9587 102 3e-17
seq8493 100 9e-17
seq12839 93.3 1e-14
seq10981 89.7 2e-13
seq10221 89.7 2e-13
seq6988 86.0 2e-12
seq8050 82.4 2e-11
>seq12569
Length=80069
Score = 848 bits (940), Expect = 0.0
Identities = 1385/1984 (70%), Gaps = 72/1984 (4%)
Strand=Plus/Plus
Query 5461 CTTGGCCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTGCG 5520
|||| |||| |||||| |||| |||| ||||||| ||||| ||| ||||||||
Sbjct 62234 CTTGTCCTTCGACACCGGCCGGTCGGCGTAACCGTTGGACAGGTCGGAGGGCGGCTTGCG 62293
Query 5521 GAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGTTC 5580
||| | ||||| | || |||| ||| | ||||| | |||||||||||||| ||
Sbjct 62294 GAACAGCAGCACCTTTTCCGGCAGGCCCGCGCCCATGCGCGATCCGTCCTTGCACTGCTC 62353
Query 5581 CGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTCTT 5640
|||| || || ||||||||| ||||||||| || |||||||| | | |||||||
Sbjct 62354 GCTCCAGCCCAGCCGATAGGTCTGGTTGTTCTCGCGGACGACGTCGGTCAGGTTGGTCTT 62413
Query 5641 CATGCCCATATAGGCCCAGCCATGCTTGACGAAG---GCTCG--AGTCACTTCCATGTGG 5695
||| | ||||| |||| |||| |||| || || |||| ||| |
Sbjct 62414 TTCGCCGAGGTAGGCGAAGCCGGCCTTGCGGAAGCACGCCCGGCAGTCG--TCCGCG--- 62468
Query 5696 AAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTC 5755
|| |||||||||||||| ||||| ||||||||||| || || || | ||| || ||||||
Sbjct 62469 AACGGGTAGACGGTCTGAAAGCCGAGGCCGGTCATACCCCCTGGCACGATCCGGTCCTTC 62528
Query 5756 ACGTGGATGCAGGCCAGACGCCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCAGATAG 5815
||||||||| ||||| || || || | |||||||||||| |||||| ||| ||
Sbjct 62529 ACGTGGATGGCGGCCACCCGGCCCGGCGCGAGCACGCGCAGCAGCTCCGGGGCGAGAAAG 62588
Query 5816 TCCATCTGCTCG-AAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTTCGG 5874
|||||||| ||| |||| || ||||||||||||||||| ||||| ||||||||||||||
Sbjct 62589 TCCATCTG-TCGCCAGAAATGGGCGTTGTCGTCGGTGTGTCCGAAATCGGCGTAGTTCGG 62647
Query 5875 CGAGTACTCGTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTTGCT 5934
||| ||||||||||| || ||| ||||| ||||| | ||| ||| |||||||
Sbjct 62648 CGAATACTCGTACTGCGTCGAGAACGGGATCGAGGTGACGATCAGGCCCACGCTGTCCGC 62707
Query 5935 TTCCATGCGGCAGGTTTCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCCCTT 5994
||| || | ||||||| |||||||| | ||| || | | |||| | ||| |
Sbjct 62708 CGGCATCCGTCGCGTTTCGACGACGGTGTCTTCGTTCACCAAGCGATAGTTGTCGCCGGT 62767
Query 5995 GATCTCGACGCG---CTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCCATGGCGGCCAC 6051
| ||||| || || ||||||||||| ||||||||| || |||||| ||||
Sbjct 62768 CACCTCGATCCGATCCTTCACGCCCATGGCGCGGGTGAGCACCTTCGCCATGTCGGCGTT 62827
Query 6052 GGACAGGCCGTACTGCTTGATGATCTCGGTCATGCGCTGAACCATGGTGTTGTGCTGCTG 6111
|||||||||||| | ||||||| || ||||| || |||| | |||||||
Sbjct 62828 GGACAGGCCGTATTCGCGGATGATCGCGCTCATGGTCTTCGCCATTTCCTCGTGCTGCGC 62887
Query 6112 CCACTTCCGTTCGAGTTGG---CGGCGGATGTCGCGCTCGGCCTCGGTATAGATCAGGTC 6168
||||||| || || || || | | | |||||||| ||||| ||||||| ||
Sbjct 62888 CCACTTC---TCCAGCAGGGTCCGCAGCACGGCGCGCTCGCTCTCGGCGTAGATCACGTG 62944
Query 6169 GATGCGCACACGGCCTG--TCTGCAGGAATCGGTGCAGGCGGTGAATGGACTGGATGAAG 6226
||| | | |||| || |||||||||||| || | |||||| || | ||||||||||
Sbjct 62945 GAT-CTC-GACGGGATGCCCCTGCAGGAATCGCTGGATGCGGTGGATCGCCTGGATGAAG 63002
Query 6227 TCGTTGAACTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCTGGAAGTTG 6286
|||||||| ||||||||||| |||||| ||| ||| ||| |||||||||||||||
Sbjct 63003 TCGTTGAATTTGAAGCCGATCCCCAGGAAGACCGCCTTGTGGCAATGGCGCTGGAAGTTG 63062
Query 6287 CAGCCGCTGCCTGCGATCACTGGTTTGGCAGCCAGTTCCTGGAACTCGCCGTCGCTGAAC 6346
||||| ||| |||||||| || ||||| || || | | ||| |||||||||||||
Sbjct 63063 CAGCCTGAGCCGGCGATCACCGGCTTGGCCGCGAGATAGGGAAACCAGCCGTCGCTGAAC 63122
Query 6347 TGGACAATCGCGCGCTCGCGCTCCTCCAGATCCTGGGCGCCGTAGACGCTGATGGCGGTG 6406
|||| ||||| | |||||| |||| |||||||||| |||| | ||||||| | || |
Sbjct 63123 AGGACGATCGCCTGTTCGCGCGCCTCAAGATCCTGGGAGCCGAACACGCTGACGACGTTC 63182
Query 6407 GGGATAGCGGCCTCGATCGCGTGGCGTTCCGCCTCGAGGTCATGCCAGATGATCCGGTGA 6466
|| | ||| ||||||||| || || ||||| || || ||||| | ||| | |
Sbjct 63183 GGCAGGGCGAGCTCGATCGCCGCCCGCTCGGCCTCCAGATCGTGCCACAGGATGTAGCGC 63242
Query 6467 GCATCTGGAGCCTCGGCCCGGATCTCCATCAGTTTGGCGATCCGGGCAGGAAGGCTCTCG 6526
| || || | | || ||||||| || || ||| ||||| ||| | |||
Sbjct 63243 CCCTCGGGGTCGGCCGCGAGGATCTCGCGCATCTTCCGGATGCGGGCCTCCAGGGTGTCG 63302
Query 6527 CGCTT---CTCTGCGGCGGCGTCCTGCACGCCAATGGCGGTGTTGCGAAGCAGGCGGCCC 6583
||||| || | || ||| | |||||| | || || | | |||||||||
Sbjct 63303 CGCTTGACCTTGGACGCCGCGAC---CACGCCGACCGCATCGTCCTGGAATAGGCGGCCC 63359
Query 6584 TGGCCGTTACGCTCATGGCCAGCGTGCGAGTGGTCGGACGGTACTTCGTGCCAGCGGATG 6643
|||||| | || || ||| | ||||| ||| |||||||| || |
Sbjct 63360 TGGCCGCTCTTGTCGGTTCCGGCGGCCCGATGGTCCACCGGCACTTCGTGATAGATCACC 63419
Query 6644 TCCAGTTCCGGTAGCGCGTAGCCTTCGTCGCTGAACCCGAGGTCGCTGGGGCGCTGAACG 6703
| ||| ||| || ||||||| |||||| ||| ||||| ||||| || ||||| |||
Sbjct 63420 TGCAGGGGCGGCAGGTCGTAGCCGTCGTCGGAGAAGCCGAGATCGCTCGGCCGCTGGACG 63479
Query 6704 AAGATCGCCCAGGACGCCACCCACATCCAGAACTCGCCCTCTTTGTGGGCATGGATGGTG 6763
|| | ||||| || ||||| ||||||||||| ||||||||| | || | ||||
Sbjct 63480 AACAGACCCCAGCTTGCGCACCACAGCCAGAACTCGCGCTCTTTGTGCGGGTGCAGGGTG 63539
Query 6764 AGTTGGTCGGCCTTCTCAGAGTTGCGTTTGAAGAACCTGGTCTTGGCCTGGCCGACATCC 6823
|| |||||| | ||| || || ||| |||| |||||||||||| |||||||||
Sbjct 63540 AGGGCGTCGGCGTGCTCGCTGTCTCGCCGGAAAAACCGGGTCTTGGCCTGCCCGACATCC 63599
Query 6824 ATCACGCCGAGGAAGGCCGAGTAAGCCAGTAGCTCGATGTATTCGTTCGGGCTTGGCGTG 6883
|||||||| ||||| ||||| || || || ||||| ||| | ||||| || ||||||
Sbjct 63600 ATCACGCCCAGGAACGCCGAATAGGCGAGCAGCTCTATGAAATCGTTGGGCGACGGCGTG 63659
Query 6884 GCAGTGGCCACGTACCGGTACCGGACGCCATCGCCGCGGACGCCGGCGGCGCGATCGTCA 6943
|| ||||| ||| | || || |||| | | |
Sbjct 63660 GCCGTGGCGACGAAGCGATA------------------------GGCGACCTGGT----- 63690
Query 6944 CCAGCGAACAGAGCCATGAACTCGCGGAACGTCTTGCTGCCGCCGAAGCCGCGAAGGCAA 7003
||||||| |||||||||||| || |||||| |||||||||||| || ||
Sbjct 63691 ----CGAACAGGCGCATGAACTCGCGAAAGGTCTTGGAGCCGCCGAAGCCTCGCAGAACG 63746
Query 7004 CTGGCTTCGTCCAGGCTTGCCACGCTGAACCGGCGAGGGTCGAGCTTGCCGTCGCGGACG 7063
||||| |||||||||| || || ||| | | ||||||||||||||||| || ||
Sbjct 63747 CTGGCCTCGTCCAGGCAGGCGACCGCGAAACAGGATGGGTCGAGCTTGCCGTCCCGAACC 63806
Query 7064 GTCTCGTAATTGGTCAGGTAGATGGTGGTGGGGTCGTCTACCTCGTCGAAACTGCGGATG 7123
|||||||| ||||||||||||| | ||| ||||| |||| |||| | || |||
Sbjct 63807 GTCTCGTAGTTGGTCAGGTAGAGGCCCCCGGGATCGTCCGCCTCCTCGATCCGCCGAATG 63866
Query 7124 AACCGGACGGTGATGCCGAGCATCGCGGCGTCGCGGTAGAACTCCTGGCGCACACCCAGC 7183
||||||||| | ||| ||||| |||||||| || |||||| || ||||| || |||
Sbjct 63867 AACCGGACGCGAACGCCCAGCATGGCGGCGTCCCGCATGAACTCTTGCCGCACGCCGAGC 63926
Query 7184 GGAATGGTGATGAGAGCGTAGCCGCCGGCTAGGTCGCGGGTGACGCGCACCACCTCAAGC 7243
|| ||| ||| || | ||||||| | ||||| ||| ||| | | ||| | |
Sbjct 63927 GGGATGACGATCAGGCCCATCCCGCCGGAGATCTCGCGCATGATCCGCGCAATCTCCAAC 63986
Query 7244 TGCATTACCGACTTGCCCAGGCCGAAGGCCGCGAAACAGGCCGCGCGGCCTTGGCGCACC 7303
|| | || || |||||||||||||| ||||| ||| || ||||| | || |||
Sbjct 63987 TGGACGACGCTTTTCCCCAGGCCGAAGGCGGCGAACAGGGCGGCCCGGCCGAGACGGACC 64046
Query 7304 AGCCAGGTGGCGATGGCGCGCTGGTGCGGCTTGAGCAGGGGGTTGAAGGCCG--AGGGCT 7361
|||| | | ||||| ||||| || |||||| | || |||| ||| |||||
Sbjct 64047 GCCCAGCAGACCATGGCCCGCTGATGGTCCTTGAGGATCGGATTGA--CCCGGTCGGGCT 64104
Query 7362 CCACTTCGAAGCCTTTCGGCTCGGCG-AGGCGG-ACCTTCGCTCGCAAGAAGTCTTCATA 7419
| | |||||||| | || || | ||||| ||||| || || |||||| | |||
Sbjct 64105 CGATCTCGAAGCC--GCAGCGGGGAGCCGGCGGCACCTTGGCCGCCAGGAAGTCGTGATA 64162
Query 7420 GGCG 7423
||||
Sbjct 64163 GGCG 64166
Score = 190 bits (210), Expect = 6e-44
Identities = 250/344 (73%), Gaps = 2/344 (1%)
Strand=Plus/Plus
Query 4899 CACCGTCCAGGAAGTAGCGGGAGTTCAGTTCGTGGGCGCGGGTTCTGCGCTTGAGCTTCA 4958
||||||| || |||||| | |||||| |||| || | | |||| | |||| |
Sbjct 61741 CACCGTCGAGAAAGTAGGCCGGGTTCAGCTCGTTCGCCCAGCCGACGCGCCCGTGCTTGA 61800
Query 4959 GCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTCCA 5018
|||| || || |||||||| | |||||||| |||||||| |||| ||| || |
Sbjct 61801 TGGCGCGATAGGGCACGGTCATCAGGCCGCCGAACGGATCGAACACCACGTCGCCCGGCT 61860
Query 5019 TGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCATTT 5078
||| |||| | ||| |||||||||||| ||||| |||| |||||||||||| |||
Sbjct 61861 CGGAACACTGGATGATCAGCCGGTCGACGATATCGAAGGGCAGGGGGCACAGGTGCTTTT 61920
Query 5079 CCTGGCCCTTGCT-GTACTGCTGGGCGTTGAGCGTCCGCATGCGGGCGACGTCGGTCCAT 5137
|| |||| |||| | ||| || |||||||| | |||| ||||||| ||||||||
Sbjct 61921 CCGCGCCC-TGCTGGGCCTGGACGGTGTTGAGCGACAGCATCTGGGCGACATCGGTCCAG 61979
Query 5138 ACGTCCGGGTGCCAGGACTGCGGTGGCAGCAGCATGAAGCCGGTGGGCAGCTTCCCGGTG 5197
||||| |||||| ||||| ||||||| ||||||| | |||| || || |
Sbjct 61980 ACGTCGTCGTGCCAACTGTGCGGCGGCAGCAACATGAAGGTCGGCGGCAATTTGCCTTTT 62039
Query 5198 ACCTCCAGCGATTCGCCGATGCGGACGTGGTGCTCGAAGTCGTA 5241
| ||||||| |||||| | |||||||||||||||||||||
Sbjct 62040 GCGTCCAGCGCTTCGCCCACCTTGACGTGGTGCTCGAAGTCGTA 62083
>seq6089
Length=13452
Score = 673 bits (746), Expect = 0.0
Identities = 1285/1876 (68%), Gaps = 99/1876 (5%)
Strand=Plus/Plus
Query 5459 GGCTTGGCCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTG 5518
||||| ||||| ||||| | ||| | ||| ||||| |||||| || ||||||
Sbjct 2915 GGCTTTTCCTTGGTGACCGGCACATCGGCATAGCCGTTGCTCCGGTCGGTCGGCGGCTTG 2974
Query 5519 CGGAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGT 5578
||||| | ||||| || ||||||| |||||| ||||| | || | |||||||||||
Sbjct 2975 CGGAACAGTAGCAGATATTCGGGCAGGCCGACGCCCATGCCGCTGGCATCCTTGCACTGC 3034
Query 5579 TCCGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTC 5638
|| ||||| || || || || || ||||||||||| || ||||||||||| |||
Sbjct 3035 TCGGTCCAGCCCAGCCGATAAGTGCCCGCATTCTCGCGAACGACATCGGTGACGATCGTC 3094
Query 5639 TTCATGCCCATATAGGCCCAGCCATGCTTGACGA--AGGCTCGAGTCACTTC-CATGTGG 5695
|||||||| |||||| |||||||| | ||| | | |||| || | |||| |
Sbjct 3095 ACCATGCCCAGATAGGCGAAGCCATGCCGG-CGATAATGATCGATGCAGCGCGCATG--G 3151
Query 5696 AAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTC 5755
|| || | || || ||||||| || || ||||| || |||| | ||||||||||
Sbjct 3152 AACGGCTCGATCGTGCGGAAGCCCAGACCCGTCATGCCCGACGGAACAACGCGATCCTTC 3211
Query 5756 ACGTGGATGCAG-GCCAGACGCCCGG--GGATGGTC-ACGCGCAGCAGTTCCGGGATCAG 5811
|| ||||| ||||| |||| | || || ||||||||||| || || ||||
Sbjct 3212 AC----ATGCACCGCCAGGCGCCGGCCCGGCTGCAAGACGCGCAGCAGCTCGGGCGTCAG 3267
Query 5812 ATAGTCCATCTGCTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTT 5871
||||||||||||| ||||||| || || |||||||| |||||||| || ||| |
Sbjct 3268 ATAGTCCATCTGCGCGAAGAAATGGTCGGCATCGTCGGTATGGCCGAAATCATTATAGCT 3327
Query 5872 CGGCGAGTACTCGTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTT 5931
|||||| || || || ||||||| ||||| | |||||||| ||| ||||||||||
Sbjct 3328 CGGCGAATATTCATATTGGGTGCCAAAGGGCACGCTGGTGACAATCAGGCCGACGCTGCC 3387
Query 5932 GCTTTCCATGCGGCAGGTTTCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCC 5991
||| ||||| ||| ||| | || ||||| ||| | | | || || |||
Sbjct 3388 GCTCTCCATCTGGCCGGTCTGGATGACGGTATCGCCTTCCCATACCTTCCAGCCCG-GCC 3446
Query 5992 CTTGATCTCGACGCGCTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCCAT--------- 6042
| ||| ||| ||||| || || ||||| || | ||||
Sbjct 3447 C-----CTCCGCGCAGTCCACCGCCGGGGCCGTGGTGACCGTTCGCGCCAGCACGTCGCG 3501
Query 6043 ---GGCGGCCACGGACAGGCCGTAC-TGCTTGATGATCTCGGTCATGCGCTGAACCATGG 6098
| |||| | | ||| || || ||| |||||||||| |||| |||| || |
Sbjct 3502 CGCGCCGGCAAGGCCCAGACCATAGGTGCG-GATGATCTCGCTCATCCGCTCGGCCGTCT 3560
Query 6099 TGTTGTGCTGCTGCCACTTCCGTTCGAGTTGGCGGCGGATGTCGCGCTCGGCCTCGGTAT 6158
| |||||| || ||| || ||| || || || | |||| |||||||| | ||
Sbjct 3561 TCTTGTGCCGCGCCCATTTGGCTTCCAGCGACCGCCGCACCGCGCGTTCGGCCTCCGAAT 3620
Query 6159 AGATCAGGTCGATGCGCACACGGCCTGTCTGCAGGAATCGGTGCAGGCGGTGAATGGACT 6218
|||||||||||||||| || || |||||||| || || || | |||||| || | ||
Sbjct 3621 AGATCAGGTCGATGCGGACGCGATGCGTCTGCAGAAACCGCTGGATGCGGTGGATAGCCT 3680
Query 6219 GGATGAAGTCGTTGAACTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCT 6278
| |||||||||||||||||||| |||||||||||| | || ||||| ||| |||||||
Sbjct 3681 GAATGAAGTCGTTGAACTTGAAACCGATGCCCAGGAATATCGCCCAATGGCAATGGCGCT 3740
Query 6279 GGAAGTTGCAGCCGCTGCCTGCGATCACTGGTTTGGCAGCCAGTTCCTGGAACTCGCCGT 6338
|||| ||||||||| ||| || | ||| || ||||||||||| ||||| | | ||||
Sbjct 3741 GGAAATTGCAGCCGGAGCCGGCCAGCACCGGCTTGGCAGCCAGCTCCTGCACATTTCCGT 3800
Query 6339 CGCTGAACTGGACAATCGCGCG-CTCGCGCTCCTCCAGATCCTGGGCGCCGTAGACGCTG 6397
|| || || ||| ||| ||||||||| |||||| |||| || || |||| ||||
Sbjct 3801 CGGAAAAGGCGATGATC-CGCTTCTCGCGCTCGTCCAGACCCTGCGCACCATAGATGCTG 3859
Query 6398 ATGGCGGTGGGGATAGCGGCCTCGATCGCGTGGCGTTCCGCCTCGAGGTCATGCCAGATG 6457
| | |||| | || ||||||||| | ||| || ||| || || |||||||||
Sbjct 3860 GCGACATTGGGCACGGCCCGCTCGATCGCCTCGCGCTCGCGCTCAAGATCGTGCCAGATG 3919
Query 6458 ATCCGGTGAGCATCTGGAGCCTCGGCCCGGATCTCCATCAGTTTGGCGATCCGGGCAGGA 6517
|| ||||| || || | || || ||||| ||||||| |||||||| || ||
Sbjct 3920 ATACGGTGTGCCGTAGGGTCTTCCGCTCGGATATCCATCATCTTGGCGATGCGCGCGTCC 3979
Query 6518 AGGCTCTCGCGCTTCTCTGCGGCGGCGTCCTGCACGCCAATGGCGGTGTTGCGAAGCAGG 6577
|||||||||||||| || || || || | ||| || ||| || |||||
Sbjct 3980 AGGCTCTCGCGCTTTTCGCGGGACGCATCGACGATGCCGATCGCGTCTTTCTTGAGCAGC 4039
Query 6578 CGGCCCTGGCCGTTACGCTCATGGCCAGCGT-GCGAGTGGTCGGACGGTACTTCGTGCCA 6636
| ||||||||| || | ||| ||| || | |||||||| || || || |||||
Sbjct 4040 AGTCCCTGGCCGCCCTTGTCCTCGCCGGCGGCGCTA-TGGTCGGATGGCACCTCATGCCA 4098
Query 6637 GCGGATGTCCAGTTCCGGTAGCGCGTAGCCTTCGTCGCTGAACCCGAGGTCGCTGGGGCG 6696
||| | |||||| || || || | ||||| |||||| || || || ||||| || ||
Sbjct 4099 GCGCACGTCCAGCTCGGGCAGGTCATAGCCCTCGTCGGAAAAACCCAGATCGCTCGGCCG 4158
Query 6697 CTGAACGAAGATCGCCCAGGACGCCACCCACATCCAGAACTCGCCCTCTTTGTGGGCATG 6756
||| ||||| |||||| |||||||| |||||| || | || ||||| | |||
Sbjct 4159 CTGGACGAATGCGGCCCAGCTATTCACCCACAGCCAGAATTCCTCTTCCTTGTGCGGATG 4218
Query 6757 GATGGTGAGTTGGTCGGCCTTCTCAGAGTTGCGTTTGAAGAACCTGGTCTTGGCCTGGCC 6816
|||||| |||| |||||||||||| ||| || |||||||||| |||||||||||||||
Sbjct 4219 GATGGTCAGTTCGTCGGCCTTCTCGCTGTTCCGCTTGAAGAACCGGGTCTTGGCCTGGCC 4278
Query 6817 GACATCCATCACGCCGAGGAAGGCCGAGTAAGCCAGTAGCTCGATGTATTCGTTCGGGCT 6876
||||||||| | | |||||||| | || ||||| |||||||| || ||||||||
Sbjct 4279 GACATCCATGATCTCCAGGAAGGCGGCATAGGCCAGCAGCTCGATATAGTCGTTCGGCGA 4338
Query 6877 TGGCGTGGCAGTGGCCACGTACCGGTACCGGACGCCATCGCCGCGGACGCCGGCGGCGCG 6936
|||||||| ||||| || || || | ||| ||||
Sbjct 4339 CGGCGTGGCCGTGGCGACAAACTTATATTG-----CAT-GCCG----------------- 4375
Query 6937 ATCGTCACCAGCGAACAGAGCCATGAACTCGCGGAACGTCTTGCTGCCGCCGAAGCCGCG 6996
||||||| ||||||||||||||| |||||| ||||||| || |||||
Sbjct 4376 ----------TCGAACAGCCGCATGAACTCGCGGAAGGTCTTGGTGCCGCCAAAACCGCG 4425
Query 6997 AAGGCAACTGGCTTCGTCCAGGCTTGCCACGCTGAACCGGCGAGGGTCGAGCTTGCCGTC 7056
||||| ||||||||||| || | |||| | |||||| |||||| ||
Sbjct 4426 CAGGCACGATGCTTCGTCCAGCGACGCGGCATTGAAATGCGTCAGGTCGATCTTGCCTTC 4485
Query 7057 GCGGACGGTCTCGTAATTGGTCAGGT--AGATGGTGGTGGGGTCG-TC------------ 7101
|||||| | || || |||||||||| || || | || || ||
Sbjct 4486 GCGGACAGATTCATAGTTGGTCAGGTACAGCTGCCCGCTCGGCCGATCCGCATGCAGCGA 4545
Query 7102 TACCTCGTCGAAACTGCGGATG--AACCGGACGGTGATGCCGAGCATCGCGGCGTCGCGG 7159
| |||| | |||||||||| || |||| | ||| |||||| ||||||||
Sbjct 4546 GATCTCGGCCGTACTGCGGATGAAAATCGGA--TCCAGGCCCAGCATCAGCGCGTCGCGC 4603
Query 7160 TAGAACTCCTGGCGCACACCCAGCGGAATGGTGATGAGAGCGTAGCCG-CCGGCTAGGTC 7218
| ||| || |||| |||||| | | ||| || |||| || ||| || |
Sbjct 4604 TTGAATTCGATCAGCACGGTCAGCGGCACGACGATCAGCTGCCGGCCGCCCAGCT-GGGC 4662
Query 7219 GC--GGGTGACGCGCACCACCTCAAGCTGCATTACCGACTTGCCCAGGCCGAAGGCCGCG 7276
|| | || ||||| | ||| |||||||| |||||||||||||||||||| || |||
Sbjct 4663 GCCAAGCTG--GCGCATGATCTCCAGCTGCATGACCGACTTGCCCAGGCCGAACGCAGCG 4720
Query 7277 AAACAGGCCGCGCGGC 7292
| || ||||||||
Sbjct 4721 A---AGATCGCGCGGC 4733
Score = 109 bits (120), Expect = 2e-19
Identities = 166/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 4957 CAGCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTC 5016
|||||||||| || || ||||| | |||||||| ||||| ||| |||||| ||
Sbjct 2370 CAGCGCGCAGG--GGCACCGTCATCAGGCCGCCGAACGGATCATAGATCAGGTCGCCCGG 2427
Query 5017 CATGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCAT 5076
|| | | | |||||| ||||||||||| ||||| |||| ||||| || |||
Sbjct 2428 GTTGCTCCAGTTCGTGATGGCGCGGTCGACGATATCGAAGGGCAGGGGGCATAGATGCTG 2487
Query 5077 TTCCTGGCCCTTGCTGTACTGCTGGGCGTTGAGCGTCCG-CATGCGGGCGACGTCGGTCC 5135
|| |||||||| ||||| | |||| ||| | |||||| ||||| |||||||
Sbjct 2488 CTCGCGGCCCTTGGCCGACTGCATCGTGTTG-GCGCCATACATGCGCGCGACATCGGTCC 2546
Query 5136 ATACGTCCGGGTGCCAGGACTGCGGTGGCAGCAGCATGAAGCCGGTGGGCAGC 5188
| || || || |||||| |||| |||| |||| ||| |||||||||||
Sbjct 2547 AGACATCTGGATGCCAGCTCTGCACCGGCATCAGCGCGAAATCGGTGGGCAGC 2599
>seq7029
Length=148368
Score = 145 bits (160), Expect = 2e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 21287 AAGCTGCTGGCGATGGAGCTTGGTATCCCCG-TGATCGTGCTGTCGCAGCTCAACCGCTC 21345
||| ||||||| | |||| ||| | |||| |||| | ||||| ||||||||||| ||
Sbjct 76564 AAGATGCTGGCCAAGGAG-TTGCAGTGCCCGGTGATTGCCCTGTCCCAGCTCAACCGTTC 76622
Query 21346 CCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGAT 21405
|||||||||| | ||||||| || |||||||| ||||||||||| || || || ||
Sbjct 76623 GGTGGAGCAGCGCACCGACAAGCGCCCCATGATGTCCGACCTGCGCGAATCGGGCGCCAT 76682
Query 21406 CGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATAC 21465
||||||||| ||||| | ||||||||| | |||||||| || |||| || ||| |
Sbjct 76683 CGAGCAGGATGCCGACATCATCATGTTCATCTACCGCGATGACTACTACAACAAGGACAG 76742
Query 21466 CCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514
| || | | | | | || || | ||||||| ||||| || ||||||
Sbjct 76743 CAAGGAGCCCAACATCGCCGAAGTCATCATCGGCAAGCAGCGTAACGGC 76791
>seq12095
Length=15812
Score = 120 bits (132), Expect = 1e-22
Identities = 145/197 (74%), Gaps = 3/197 (2%)
Strand=Plus/Plus
Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCG 21373
|| ||||||| ||| ||||||||||||||||| ||||| ||| | ||||||| |||
Sbjct 1475 CCGGTGATCGCGCTTTCGCAGCTCAACCGCTCGCTGGAAACGCGTACCGACAAGCGCCCG 1534
Query 21374 ATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTC 21433
| ||| | || || ||||| || || || ||||||||||| || || ||||| | |||
Sbjct 1535 GTAATGGCCGATCTTCGCGAATCGGGCGCAATCGAGCAGGATGCGGACATGATCGTCTTC 1594
Query 21434 GTGTACCGCGACGAGGTCTACCACCCGG---ATACCCAGTACCGCGGCGTGGCTGAGTTG 21490
| ||||||||||| |||| || || || | | | || ||| |||| ||| |
Sbjct 1595 ATCTACCGCGACGATTACTACAACAAGGAAAATTCGCCGGACAAGGGCCTGGCCGAGATC 1654
Query 21491 ATCATCGCGAAGCACCG 21507
||||||| ||||||||
Sbjct 1655 ATCATCGGCAAGCACCG 1671
>seq14232
Length=72504
Score = 113 bits (124), Expect = 1e-20
Identities = 204/299 (68%), Gaps = 6/299 (2%)
Strand=Plus/Plus
Query 21155 CTGCGGGCCCTGGCCCGGCGTCACAAGCAGCGCCATGGGTTGAGCCTGCTGGTGGTGGAC 21214
||||| ||| ||||| || | ||||| || |||| | | | | || || |||
Sbjct 61661 CTGCGCACCCGCGCCCGTCGCCTCAAGCGCCGTCATGATGTCGGTTTCATCGTCGTCGAC 61720
Query 21215 TACCTGCAGCTGCTGGAGAGCTCCGGCAAGTCC------ACTCGCACCGAGGACGTCAGC 21268
|| || ||||||||| || || ||||||| | | |||| | | || |
Sbjct 61721 TATCTCCAGCTGCTGCAGGGCAGCGGCAAGGCAGGCGATAGTCGCGTCAACGAAATTTCG 61780
Query 21269 GACATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTG 21328
|| || ||||| | ||| | |||||| ||| ||| | |||||||| | | ||||
Sbjct 61781 GAAATTTCCCGTGGTTTGAAGACGTTGGCGAAGGAACTTCATGTCCCCGTGCTGGCGCTG 61840
Query 21329 TCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTG 21388
|||||||||| ||| | |||| || || | ||||||| ||| | |||| |||||
Sbjct 61841 TCGCAGCTCAGCCGTGCGGTGGAACAACGCGAGGACAAGCGTCCGCAGCTGTCCGACCTT 61900
Query 21389 CGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGA 21447
||||| || || |||||||||||||||| || || || |||||||| |||||| ||
Sbjct 61901 CGCGAATCGGGCTCGATCGAGCAGGACGCGGACATGGTCTGGTTCGTGTTCCGCGAGGA 61959
>seq9587
Length=50143
Score = 102 bits (112), Expect = 3e-17
Identities = 162/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 3390 GCGCCCTTCGAGTCCATCCAGCCGGGCAGCAGAGCGATTGCCTGGCAGGTGAGCAGCTTC 3449
|||||||| ||| | |||||| ||||||| || || | ||| || ||||| |
Sbjct 17424 GCGCCCTTGGAGCCGCGCCAGCCAGGCAGCATGTAGACCGCATCGCATTTGCACAGCTGC 17483
Query 3450 TGCAGGTCGAGCCGCAGGTAGTCGGCCCACTCGAAGCCCGGAATCTCGCCGTGCTCGGCG 3509
|||| | || |||| |||| | ||||| | || || | || || ||||||
Sbjct 17484 GGCAGCGCCAGACGCATGTAGCCAGCCCAACTGCCGCACGCTGGCGCGGGGTTCTCGGCC 17543
Query 3510 GGGTTCTCGACCTGGTACCCGAGGCCTCGCAG-GCGCGCGGCTTCGGCGTGGAACGCGGG 3568
||||||||||| |||| || || | ||||| ||| ||||| || || ||| || ||
Sbjct 17544 GGGTTCTCGACGTGGTGGCCCTGGGCGCGCAGCGCG-GCGGCCGCGCGGTTGAAGGCCGG 17602
Query 3569 GAAGTTGTGTTCGGGCAGGCCAGTCATGGGGCCTGCGAGGTAGATGCGCT 3618
||||| || |||||||| ||||| ||||| |||| |||||||||||
Sbjct 17603 ATAGTTGAACTCTGGCAGGCCTGTCATCGGGCCGGCGATGTAGATGCGCT 17652
>seq8493
Length=118667
Score = 100 bits (110), Expect = 9e-17
Identities = 159/227 (70%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 47779 GTCCGCCAGGCAAAAGCAGAAGCTAAAGACTACACCCTCGCCGACATTGACGGCCTCTCT 47838
|||||||| || ||||| | || | |||||| || | ||||| || || |||||
Sbjct 17000 GTCCGCCAAGCCAAAGCCACCGGCAAGGCCTACACACTTCCAGACATCGATGGTCTCTCC 16941
Query 47839 CTCTTCGTTTCTCACAAGGGCACCAAAAGCTGGCACTTCCG---CTTTTCGCTGAATGGC 47895
|| ||| | || ||||| ||| |||||||||||||| || | | |||| |
Sbjct 16940 CTGGCCGTGACGGCCACGGGCAGCAAGAGCTGGCACTTCCGTTACTACTGGATGAAGG-- 16883
Query 47896 CAGCAGAAGCGAGTGTCGCTTGGGACGTATCCCGAGTTGAGCCTGCGTGATGCCCGGCAG 47955
||| ||||| ||||||| || || ||||||||| || ||| ||||| || ||
Sbjct 16882 -AGCCCAAGCGCATGTCGCTGGGCACCTATCCCGAGGTGTCCCTTCGTGAGGCACGCGCC 16824
Query 47956 CGCCGTGACGAGGCGCGTTCGTTGGTGGCCCAAGGTATCGATCCGCG 48002
| |||||||||||||| | ||||||||| | | ||| | |||||
Sbjct 16823 CTGCGTGACGAGGCGCGCGCCTTGGTGGCCAAGGACATCAACCCGCG 16777
>seq12839
Length=204338
Score = 93.3 bits (102), Expect = 1e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594
|| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 53982 ACTGGATTTAGGTTCCAGCGCCGCAAGGTGTGAGAGTTCGAGTCTCTCCGTCCCCACCA 54040
Score = 93.3 bits (102), Expect = 1e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594
|| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 54218 ACTGGATTTAGGTTCCAGCGCCGCAAGGTGTGAGAGTTCGAGTCTCTCCGTCCCCACCA 54276
Score = 87.8 bits (96), Expect = 6e-13
Identities = 104/141 (74%), Gaps = 0/141 (0%)
Strand=Plus/Minus
Query 21313 CCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372
||| || || | ||||| ||||| ||||| || ||||| | || || || || || ||
Sbjct 81898 CCCTGTTATTGCACTGTCACAGCTTAACCGTTCTCTGGAAAACCGTCCAAATAAACGTCC 81839
Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432
| | ||||| ||| | || || || || || ||||||||||| |||||| | || |||||
Sbjct 81838 GGTAATGTCCGACTTACGTGAATCAGGTGCAATCGAGCAGGATGCCGATTTAATTATGTT 81779
Query 21433 CGTGTACCGCGACGAGGTCTA 21453
| ||||| || ||||| ||
Sbjct 81778 TATTTACCGTGATGAGGTTTA 81758
>seq10981
Length=80740
Score = 89.7 bits (98), Expect = 2e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594
|| ||||||||||||||||||||| |||||||||||||||||||||||| | |||||||
Sbjct 57901 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTGAGAGTTCGAGTCTCTCCTTTCGCACCA 57843
>seq10221
Length=130382
Score = 89.7 bits (98), Expect = 2e-13
Identities = 113/153 (74%), Gaps = 2/153 (1%)
Strand=Plus/Minus
Query 21293 CTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAG 21352
||||| | |||||| | |||| || |||| ||||||||||| || | |||
Sbjct 117908 CTGGCCAAGGAGCTGAGCGTCCCGGTCATCGCCCTGTCGCAGCTGTCGCGTCAGGTCGAG 117849
Query 21353 CAGCG-GCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411
||||| | ||| |||||| ||| | | || |||||||| || ||||| ||||||||||
Sbjct 117848 CAGCGCGACGA-CAAGCGGCCGCAGCTTTCCGACCTGCGTGAATCCGGCTCGATCGAGCA 117790
Query 21412 GGACGCCGATGTGATCATGTTCGTGTACCGCGA 21444
||||||||| || || |||||| || |||||
Sbjct 117789 GGACGCCGACATGGTCTGGTTCGTCTATCGCGA 117757
>seq6988
Length=415921
Score = 86.0 bits (94), Expect = 2e-12
Identities = 112/153 (73%), Gaps = 4/153 (3%)
Strand=Plus/Minus
Query 21294 TGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGC 21353
|||| | ||||||| | |||| || |||| ||||| ||||| | ||| || | |
Sbjct 345962 TGGCCAAGGAGCTTAGCGTCCCGGTCATCGCCCTGTCCCAGCT--ATCGCGCCAGGTCGA 345905
Query 21354 AGCGGCCGA--ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411
|||| ||| | ||||| || ||||||||||||| || || || ||||||||||
Sbjct 345904 AGCGCGCGACGATAAGCGCCCCCAATTGTCGGACCTGCGGGAATCGGGCTCGATCGAGCA 345845
Query 21412 GGACGCCGATGTGATCATGTTCGTGTACCGCGA 21444
||| ||||| || || |||||||||||||||
Sbjct 345844 GGATGCCGACATGGTCTGGTTCGTGTACCGCGA 345812
>seq8050
Length=287393
Score = 82.4 bits (90), Expect = 2e-11
Identities = 102/137 (74%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA-ACAAGCGA 21370
|||| | |||| |||||| |||||| ||| | |||| ||| || | |||||||
Sbjct 96406 TCCCGATCATCGCGCTGTCACAGCTCTCCCGTGCGGTGGAA-AGCCGCGAAGACAAGCGT 96348
Query 21371 CCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATG 21430
||| | | || |||||||| || ||||| | ||||||||||||||||| ||| | ||
Sbjct 96347 CCGCAGCTTTCCGACCTGCGTGAATCCGGCTCCATCGAGCAGGACGCCGACGTGGTGCTG 96288
Query 21431 TTCGTGTACCGCGACGA 21447
||||||| ||| || ||
Sbjct 96287 TTCGTGTTCCGTGAGGA 96271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157082304634526
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |