Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq12569 848 0.0 seq6089 673 0.0 seq7029 145 2e-30 seq12095 120 1e-22 seq14232 113 1e-20 seq9587 102 3e-17 seq8493 100 9e-17 seq12839 93.3 1e-14 seq10981 89.7 2e-13 seq10221 89.7 2e-13 seq6988 86.0 2e-12 seq8050 82.4 2e-11 >seq12569 Length=80069 Score = 848 bits (940), Expect = 0.0 Identities = 1385/1984 (70%), Gaps = 72/1984 (4%) Strand=Plus/Plus Query 5461 CTTGGCCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTGCG 5520 |||| |||| |||||| |||| |||| ||||||| ||||| ||| |||||||| Sbjct 62234 CTTGTCCTTCGACACCGGCCGGTCGGCGTAACCGTTGGACAGGTCGGAGGGCGGCTTGCG 62293 Query 5521 GAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGTTC 5580 ||| | ||||| | || |||| ||| | ||||| | |||||||||||||| || Sbjct 62294 GAACAGCAGCACCTTTTCCGGCAGGCCCGCGCCCATGCGCGATCCGTCCTTGCACTGCTC 62353 Query 5581 CGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTCTT 5640 |||| || || ||||||||| ||||||||| || |||||||| | | ||||||| Sbjct 62354 GCTCCAGCCCAGCCGATAGGTCTGGTTGTTCTCGCGGACGACGTCGGTCAGGTTGGTCTT 62413 Query 5641 CATGCCCATATAGGCCCAGCCATGCTTGACGAAG---GCTCG--AGTCACTTCCATGTGG 5695 ||| | ||||| |||| |||| |||| || || |||| ||| | Sbjct 62414 TTCGCCGAGGTAGGCGAAGCCGGCCTTGCGGAAGCACGCCCGGCAGTCG--TCCGCG--- 62468 Query 5696 AAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTC 5755 || |||||||||||||| ||||| ||||||||||| || || || | ||| || |||||| Sbjct 62469 AACGGGTAGACGGTCTGAAAGCCGAGGCCGGTCATACCCCCTGGCACGATCCGGTCCTTC 62528 Query 5756 ACGTGGATGCAGGCCAGACGCCCGGGGATGGTCACGCGCAGCAGTTCCGGGATCAGATAG 5815 ||||||||| ||||| || || || | |||||||||||| |||||| ||| || Sbjct 62529 ACGTGGATGGCGGCCACCCGGCCCGGCGCGAGCACGCGCAGCAGCTCCGGGGCGAGAAAG 62588 Query 5816 TCCATCTGCTCG-AAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTTCGG 5874 |||||||| ||| |||| || ||||||||||||||||| ||||| |||||||||||||| Sbjct 62589 TCCATCTG-TCGCCAGAAATGGGCGTTGTCGTCGGTGTGTCCGAAATCGGCGTAGTTCGG 62647 Query 5875 CGAGTACTCGTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTTGCT 5934 ||| ||||||||||| || ||| ||||| ||||| | ||| ||| ||||||| Sbjct 62648 CGAATACTCGTACTGCGTCGAGAACGGGATCGAGGTGACGATCAGGCCCACGCTGTCCGC 62707 Query 5935 TTCCATGCGGCAGGTTTCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCCCTT 5994 ||| || | ||||||| |||||||| | ||| || | | |||| | ||| | Sbjct 62708 CGGCATCCGTCGCGTTTCGACGACGGTGTCTTCGTTCACCAAGCGATAGTTGTCGCCGGT 62767 Query 5995 GATCTCGACGCG---CTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCCATGGCGGCCAC 6051 | ||||| || || ||||||||||| ||||||||| || |||||| |||| Sbjct 62768 CACCTCGATCCGATCCTTCACGCCCATGGCGCGGGTGAGCACCTTCGCCATGTCGGCGTT 62827 Query 6052 GGACAGGCCGTACTGCTTGATGATCTCGGTCATGCGCTGAACCATGGTGTTGTGCTGCTG 6111 |||||||||||| | ||||||| || ||||| || |||| | ||||||| Sbjct 62828 GGACAGGCCGTATTCGCGGATGATCGCGCTCATGGTCTTCGCCATTTCCTCGTGCTGCGC 62887 Query 6112 CCACTTCCGTTCGAGTTGG---CGGCGGATGTCGCGCTCGGCCTCGGTATAGATCAGGTC 6168 ||||||| || || || || | | | |||||||| ||||| ||||||| || Sbjct 62888 CCACTTC---TCCAGCAGGGTCCGCAGCACGGCGCGCTCGCTCTCGGCGTAGATCACGTG 62944 Query 6169 GATGCGCACACGGCCTG--TCTGCAGGAATCGGTGCAGGCGGTGAATGGACTGGATGAAG 6226 ||| | | |||| || |||||||||||| || | |||||| || | |||||||||| Sbjct 62945 GAT-CTC-GACGGGATGCCCCTGCAGGAATCGCTGGATGCGGTGGATCGCCTGGATGAAG 63002 Query 6227 TCGTTGAACTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCTGGAAGTTG 6286 |||||||| ||||||||||| |||||| ||| ||| ||| ||||||||||||||| Sbjct 63003 TCGTTGAATTTGAAGCCGATCCCCAGGAAGACCGCCTTGTGGCAATGGCGCTGGAAGTTG 63062 Query 6287 CAGCCGCTGCCTGCGATCACTGGTTTGGCAGCCAGTTCCTGGAACTCGCCGTCGCTGAAC 6346 ||||| ||| |||||||| || ||||| || || | | ||| ||||||||||||| Sbjct 63063 CAGCCTGAGCCGGCGATCACCGGCTTGGCCGCGAGATAGGGAAACCAGCCGTCGCTGAAC 63122 Query 6347 TGGACAATCGCGCGCTCGCGCTCCTCCAGATCCTGGGCGCCGTAGACGCTGATGGCGGTG 6406 |||| ||||| | |||||| |||| |||||||||| |||| | ||||||| | || | Sbjct 63123 AGGACGATCGCCTGTTCGCGCGCCTCAAGATCCTGGGAGCCGAACACGCTGACGACGTTC 63182 Query 6407 GGGATAGCGGCCTCGATCGCGTGGCGTTCCGCCTCGAGGTCATGCCAGATGATCCGGTGA 6466 || | ||| ||||||||| || || ||||| || || ||||| | ||| | | Sbjct 63183 GGCAGGGCGAGCTCGATCGCCGCCCGCTCGGCCTCCAGATCGTGCCACAGGATGTAGCGC 63242 Query 6467 GCATCTGGAGCCTCGGCCCGGATCTCCATCAGTTTGGCGATCCGGGCAGGAAGGCTCTCG 6526 | || || | | || ||||||| || || ||| ||||| ||| | ||| Sbjct 63243 CCCTCGGGGTCGGCCGCGAGGATCTCGCGCATCTTCCGGATGCGGGCCTCCAGGGTGTCG 63302 Query 6527 CGCTT---CTCTGCGGCGGCGTCCTGCACGCCAATGGCGGTGTTGCGAAGCAGGCGGCCC 6583 ||||| || | || ||| | |||||| | || || | | ||||||||| Sbjct 63303 CGCTTGACCTTGGACGCCGCGAC---CACGCCGACCGCATCGTCCTGGAATAGGCGGCCC 63359 Query 6584 TGGCCGTTACGCTCATGGCCAGCGTGCGAGTGGTCGGACGGTACTTCGTGCCAGCGGATG 6643 |||||| | || || ||| | ||||| ||| |||||||| || | Sbjct 63360 TGGCCGCTCTTGTCGGTTCCGGCGGCCCGATGGTCCACCGGCACTTCGTGATAGATCACC 63419 Query 6644 TCCAGTTCCGGTAGCGCGTAGCCTTCGTCGCTGAACCCGAGGTCGCTGGGGCGCTGAACG 6703 | ||| ||| || ||||||| |||||| ||| ||||| ||||| || ||||| ||| Sbjct 63420 TGCAGGGGCGGCAGGTCGTAGCCGTCGTCGGAGAAGCCGAGATCGCTCGGCCGCTGGACG 63479 Query 6704 AAGATCGCCCAGGACGCCACCCACATCCAGAACTCGCCCTCTTTGTGGGCATGGATGGTG 6763 || | ||||| || ||||| ||||||||||| ||||||||| | || | |||| Sbjct 63480 AACAGACCCCAGCTTGCGCACCACAGCCAGAACTCGCGCTCTTTGTGCGGGTGCAGGGTG 63539 Query 6764 AGTTGGTCGGCCTTCTCAGAGTTGCGTTTGAAGAACCTGGTCTTGGCCTGGCCGACATCC 6823 || |||||| | ||| || || ||| |||| |||||||||||| ||||||||| Sbjct 63540 AGGGCGTCGGCGTGCTCGCTGTCTCGCCGGAAAAACCGGGTCTTGGCCTGCCCGACATCC 63599 Query 6824 ATCACGCCGAGGAAGGCCGAGTAAGCCAGTAGCTCGATGTATTCGTTCGGGCTTGGCGTG 6883 |||||||| ||||| ||||| || || || ||||| ||| | ||||| || |||||| Sbjct 63600 ATCACGCCCAGGAACGCCGAATAGGCGAGCAGCTCTATGAAATCGTTGGGCGACGGCGTG 63659 Query 6884 GCAGTGGCCACGTACCGGTACCGGACGCCATCGCCGCGGACGCCGGCGGCGCGATCGTCA 6943 || ||||| ||| | || || |||| | | | Sbjct 63660 GCCGTGGCGACGAAGCGATA------------------------GGCGACCTGGT----- 63690 Query 6944 CCAGCGAACAGAGCCATGAACTCGCGGAACGTCTTGCTGCCGCCGAAGCCGCGAAGGCAA 7003 ||||||| |||||||||||| || |||||| |||||||||||| || || Sbjct 63691 ----CGAACAGGCGCATGAACTCGCGAAAGGTCTTGGAGCCGCCGAAGCCTCGCAGAACG 63746 Query 7004 CTGGCTTCGTCCAGGCTTGCCACGCTGAACCGGCGAGGGTCGAGCTTGCCGTCGCGGACG 7063 ||||| |||||||||| || || ||| | | ||||||||||||||||| || || Sbjct 63747 CTGGCCTCGTCCAGGCAGGCGACCGCGAAACAGGATGGGTCGAGCTTGCCGTCCCGAACC 63806 Query 7064 GTCTCGTAATTGGTCAGGTAGATGGTGGTGGGGTCGTCTACCTCGTCGAAACTGCGGATG 7123 |||||||| ||||||||||||| | ||| ||||| |||| |||| | || ||| Sbjct 63807 GTCTCGTAGTTGGTCAGGTAGAGGCCCCCGGGATCGTCCGCCTCCTCGATCCGCCGAATG 63866 Query 7124 AACCGGACGGTGATGCCGAGCATCGCGGCGTCGCGGTAGAACTCCTGGCGCACACCCAGC 7183 ||||||||| | ||| ||||| |||||||| || |||||| || ||||| || ||| Sbjct 63867 AACCGGACGCGAACGCCCAGCATGGCGGCGTCCCGCATGAACTCTTGCCGCACGCCGAGC 63926 Query 7184 GGAATGGTGATGAGAGCGTAGCCGCCGGCTAGGTCGCGGGTGACGCGCACCACCTCAAGC 7243 || ||| ||| || | ||||||| | ||||| ||| ||| | | ||| | | Sbjct 63927 GGGATGACGATCAGGCCCATCCCGCCGGAGATCTCGCGCATGATCCGCGCAATCTCCAAC 63986 Query 7244 TGCATTACCGACTTGCCCAGGCCGAAGGCCGCGAAACAGGCCGCGCGGCCTTGGCGCACC 7303 || | || || |||||||||||||| ||||| ||| || ||||| | || ||| Sbjct 63987 TGGACGACGCTTTTCCCCAGGCCGAAGGCGGCGAACAGGGCGGCCCGGCCGAGACGGACC 64046 Query 7304 AGCCAGGTGGCGATGGCGCGCTGGTGCGGCTTGAGCAGGGGGTTGAAGGCCG--AGGGCT 7361 |||| | | ||||| ||||| || |||||| | || |||| ||| ||||| Sbjct 64047 GCCCAGCAGACCATGGCCCGCTGATGGTCCTTGAGGATCGGATTGA--CCCGGTCGGGCT 64104 Query 7362 CCACTTCGAAGCCTTTCGGCTCGGCG-AGGCGG-ACCTTCGCTCGCAAGAAGTCTTCATA 7419 | | |||||||| | || || | ||||| ||||| || || |||||| | ||| Sbjct 64105 CGATCTCGAAGCC--GCAGCGGGGAGCCGGCGGCACCTTGGCCGCCAGGAAGTCGTGATA 64162 Query 7420 GGCG 7423 |||| Sbjct 64163 GGCG 64166 Score = 190 bits (210), Expect = 6e-44 Identities = 250/344 (73%), Gaps = 2/344 (1%) Strand=Plus/Plus Query 4899 CACCGTCCAGGAAGTAGCGGGAGTTCAGTTCGTGGGCGCGGGTTCTGCGCTTGAGCTTCA 4958 ||||||| || |||||| | |||||| |||| || | | |||| | |||| | Sbjct 61741 CACCGTCGAGAAAGTAGGCCGGGTTCAGCTCGTTCGCCCAGCCGACGCGCCCGTGCTTGA 61800 Query 4959 GCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTCCA 5018 |||| || || |||||||| | |||||||| |||||||| |||| ||| || | Sbjct 61801 TGGCGCGATAGGGCACGGTCATCAGGCCGCCGAACGGATCGAACACCACGTCGCCCGGCT 61860 Query 5019 TGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCATTT 5078 ||| |||| | ||| |||||||||||| ||||| |||| |||||||||||| ||| Sbjct 61861 CGGAACACTGGATGATCAGCCGGTCGACGATATCGAAGGGCAGGGGGCACAGGTGCTTTT 61920 Query 5079 CCTGGCCCTTGCT-GTACTGCTGGGCGTTGAGCGTCCGCATGCGGGCGACGTCGGTCCAT 5137 || |||| |||| | ||| || |||||||| | |||| ||||||| |||||||| Sbjct 61921 CCGCGCCC-TGCTGGGCCTGGACGGTGTTGAGCGACAGCATCTGGGCGACATCGGTCCAG 61979 Query 5138 ACGTCCGGGTGCCAGGACTGCGGTGGCAGCAGCATGAAGCCGGTGGGCAGCTTCCCGGTG 5197 ||||| |||||| ||||| ||||||| ||||||| | |||| || || | Sbjct 61980 ACGTCGTCGTGCCAACTGTGCGGCGGCAGCAACATGAAGGTCGGCGGCAATTTGCCTTTT 62039 Query 5198 ACCTCCAGCGATTCGCCGATGCGGACGTGGTGCTCGAAGTCGTA 5241 | ||||||| |||||| | ||||||||||||||||||||| Sbjct 62040 GCGTCCAGCGCTTCGCCCACCTTGACGTGGTGCTCGAAGTCGTA 62083 >seq6089 Length=13452 Score = 673 bits (746), Expect = 0.0 Identities = 1285/1876 (68%), Gaps = 99/1876 (5%) Strand=Plus/Plus Query 5459 GGCTTGGCCTTGACCACCGGAATGTCGCCGTAGGCGTTGGAGTTGTCGGTGGGGGGCTTG 5518 ||||| ||||| ||||| | ||| | ||| ||||| |||||| || |||||| Sbjct 2915 GGCTTTTCCTTGGTGACCGGCACATCGGCATAGCCGTTGCTCCGGTCGGTCGGCGGCTTG 2974 Query 5519 CGGAAGATCAGCAGGTACTCGGGCATGCCGACACCCATCTTGGTGCCGTCCTTGCACTGT 5578 ||||| | ||||| || ||||||| |||||| ||||| | || | ||||||||||| Sbjct 2975 CGGAACAGTAGCAGATATTCGGGCAGGCCGACGCCCATGCCGCTGGCATCCTTGCACTGC 3034 Query 5579 TCCGTCCACGAGAGGCGGTAGGTCTGGGCGTTCTCGCGAACCACGTCGGTGACGATGGTC 5638 || ||||| || || || || || ||||||||||| || ||||||||||| ||| Sbjct 3035 TCGGTCCAGCCCAGCCGATAAGTGCCCGCATTCTCGCGAACGACATCGGTGACGATCGTC 3094 Query 5639 TTCATGCCCATATAGGCCCAGCCATGCTTGACGA--AGGCTCGAGTCACTTC-CATGTGG 5695 |||||||| |||||| |||||||| | ||| | | |||| || | |||| | Sbjct 3095 ACCATGCCCAGATAGGCGAAGCCATGCCGG-CGATAATGATCGATGCAGCGCGCATG--G 3151 Query 5696 AAGGGGTAGACGGTCTGGAAGCCAAGGCCGGTCATTCCGCCGGGAATGATGCGATCCTTC 5755 || || | || || ||||||| || || ||||| || |||| | |||||||||| Sbjct 3152 AACGGCTCGATCGTGCGGAAGCCCAGACCCGTCATGCCCGACGGAACAACGCGATCCTTC 3211 Query 5756 ACGTGGATGCAG-GCCAGACGCCCGG--GGATGGTC-ACGCGCAGCAGTTCCGGGATCAG 5811 || ||||| ||||| |||| | || || ||||||||||| || || |||| Sbjct 3212 AC----ATGCACCGCCAGGCGCCGGCCCGGCTGCAAGACGCGCAGCAGCTCGGGCGTCAG 3267 Query 5812 ATAGTCCATCTGCTCGAAGAAGTGCGCGTTGTCGTCGGTGTGGCCGAAGTCGGCGTAGTT 5871 ||||||||||||| ||||||| || || |||||||| |||||||| || ||| | Sbjct 3268 ATAGTCCATCTGCGCGAAGAAATGGTCGGCATCGTCGGTATGGCCGAAATCATTATAGCT 3327 Query 5872 CGGCGAGTACTCGTACTGGGTGCTGAAGGGGATGCTGGTGATGGTCAAGCCGACGCTGTT 5931 |||||| || || || ||||||| ||||| | |||||||| ||| |||||||||| Sbjct 3328 CGGCGAATATTCATATTGGGTGCCAAAGGGCACGCTGGTGACAATCAGGCCGACGCTGCC 3387 Query 5932 GCTTTCCATGCGGCAGGTTTCGAGCACGGTGTCGTTGTTGACGATGGTGTAGTCCTTGCC 5991 ||| ||||| ||| ||| | || ||||| ||| | | | || || ||| Sbjct 3388 GCTCTCCATCTGGCCGGTCTGGATGACGGTATCGCCTTCCCATACCTTCCAGCCCG-GCC 3446 Query 5992 CTTGATCTCGACGCGCTCCACGCCCATGGAGCGGGTGAGGGTCTGTGCCAT--------- 6042 | ||| ||| ||||| || || ||||| || | |||| Sbjct 3447 C-----CTCCGCGCAGTCCACCGCCGGGGCCGTGGTGACCGTTCGCGCCAGCACGTCGCG 3501 Query 6043 ---GGCGGCCACGGACAGGCCGTAC-TGCTTGATGATCTCGGTCATGCGCTGAACCATGG 6098 | |||| | | ||| || || ||| |||||||||| |||| |||| || | Sbjct 3502 CGCGCCGGCAAGGCCCAGACCATAGGTGCG-GATGATCTCGCTCATCCGCTCGGCCGTCT 3560 Query 6099 TGTTGTGCTGCTGCCACTTCCGTTCGAGTTGGCGGCGGATGTCGCGCTCGGCCTCGGTAT 6158 | |||||| || ||| || ||| || || || | |||| |||||||| | || Sbjct 3561 TCTTGTGCCGCGCCCATTTGGCTTCCAGCGACCGCCGCACCGCGCGTTCGGCCTCCGAAT 3620 Query 6159 AGATCAGGTCGATGCGCACACGGCCTGTCTGCAGGAATCGGTGCAGGCGGTGAATGGACT 6218 |||||||||||||||| || || |||||||| || || || | |||||| || | || Sbjct 3621 AGATCAGGTCGATGCGGACGCGATGCGTCTGCAGAAACCGCTGGATGCGGTGGATAGCCT 3680 Query 6219 GGATGAAGTCGTTGAACTTGAAGCCGATGCCCAGGTAGATGGCCCACGAGCAGTGGCGCT 6278 | |||||||||||||||||||| |||||||||||| | || ||||| ||| ||||||| Sbjct 3681 GAATGAAGTCGTTGAACTTGAAACCGATGCCCAGGAATATCGCCCAATGGCAATGGCGCT 3740 Query 6279 GGAAGTTGCAGCCGCTGCCTGCGATCACTGGTTTGGCAGCCAGTTCCTGGAACTCGCCGT 6338 |||| ||||||||| ||| || | ||| || ||||||||||| ||||| | | |||| Sbjct 3741 GGAAATTGCAGCCGGAGCCGGCCAGCACCGGCTTGGCAGCCAGCTCCTGCACATTTCCGT 3800 Query 6339 CGCTGAACTGGACAATCGCGCG-CTCGCGCTCCTCCAGATCCTGGGCGCCGTAGACGCTG 6397 || || || ||| ||| ||||||||| |||||| |||| || || |||| |||| Sbjct 3801 CGGAAAAGGCGATGATC-CGCTTCTCGCGCTCGTCCAGACCCTGCGCACCATAGATGCTG 3859 Query 6398 ATGGCGGTGGGGATAGCGGCCTCGATCGCGTGGCGTTCCGCCTCGAGGTCATGCCAGATG 6457 | | |||| | || ||||||||| | ||| || ||| || || ||||||||| Sbjct 3860 GCGACATTGGGCACGGCCCGCTCGATCGCCTCGCGCTCGCGCTCAAGATCGTGCCAGATG 3919 Query 6458 ATCCGGTGAGCATCTGGAGCCTCGGCCCGGATCTCCATCAGTTTGGCGATCCGGGCAGGA 6517 || ||||| || || | || || ||||| ||||||| |||||||| || || Sbjct 3920 ATACGGTGTGCCGTAGGGTCTTCCGCTCGGATATCCATCATCTTGGCGATGCGCGCGTCC 3979 Query 6518 AGGCTCTCGCGCTTCTCTGCGGCGGCGTCCTGCACGCCAATGGCGGTGTTGCGAAGCAGG 6577 |||||||||||||| || || || || | ||| || ||| || ||||| Sbjct 3980 AGGCTCTCGCGCTTTTCGCGGGACGCATCGACGATGCCGATCGCGTCTTTCTTGAGCAGC 4039 Query 6578 CGGCCCTGGCCGTTACGCTCATGGCCAGCGT-GCGAGTGGTCGGACGGTACTTCGTGCCA 6636 | ||||||||| || | ||| ||| || | |||||||| || || || ||||| Sbjct 4040 AGTCCCTGGCCGCCCTTGTCCTCGCCGGCGGCGCTA-TGGTCGGATGGCACCTCATGCCA 4098 Query 6637 GCGGATGTCCAGTTCCGGTAGCGCGTAGCCTTCGTCGCTGAACCCGAGGTCGCTGGGGCG 6696 ||| | |||||| || || || | ||||| |||||| || || || ||||| || || Sbjct 4099 GCGCACGTCCAGCTCGGGCAGGTCATAGCCCTCGTCGGAAAAACCCAGATCGCTCGGCCG 4158 Query 6697 CTGAACGAAGATCGCCCAGGACGCCACCCACATCCAGAACTCGCCCTCTTTGTGGGCATG 6756 ||| ||||| |||||| |||||||| |||||| || | || ||||| | ||| Sbjct 4159 CTGGACGAATGCGGCCCAGCTATTCACCCACAGCCAGAATTCCTCTTCCTTGTGCGGATG 4218 Query 6757 GATGGTGAGTTGGTCGGCCTTCTCAGAGTTGCGTTTGAAGAACCTGGTCTTGGCCTGGCC 6816 |||||| |||| |||||||||||| ||| || |||||||||| ||||||||||||||| Sbjct 4219 GATGGTCAGTTCGTCGGCCTTCTCGCTGTTCCGCTTGAAGAACCGGGTCTTGGCCTGGCC 4278 Query 6817 GACATCCATCACGCCGAGGAAGGCCGAGTAAGCCAGTAGCTCGATGTATTCGTTCGGGCT 6876 ||||||||| | | |||||||| | || ||||| |||||||| || |||||||| Sbjct 4279 GACATCCATGATCTCCAGGAAGGCGGCATAGGCCAGCAGCTCGATATAGTCGTTCGGCGA 4338 Query 6877 TGGCGTGGCAGTGGCCACGTACCGGTACCGGACGCCATCGCCGCGGACGCCGGCGGCGCG 6936 |||||||| ||||| || || || | ||| |||| Sbjct 4339 CGGCGTGGCCGTGGCGACAAACTTATATTG-----CAT-GCCG----------------- 4375 Query 6937 ATCGTCACCAGCGAACAGAGCCATGAACTCGCGGAACGTCTTGCTGCCGCCGAAGCCGCG 6996 ||||||| ||||||||||||||| |||||| ||||||| || ||||| Sbjct 4376 ----------TCGAACAGCCGCATGAACTCGCGGAAGGTCTTGGTGCCGCCAAAACCGCG 4425 Query 6997 AAGGCAACTGGCTTCGTCCAGGCTTGCCACGCTGAACCGGCGAGGGTCGAGCTTGCCGTC 7056 ||||| ||||||||||| || | |||| | |||||| |||||| || Sbjct 4426 CAGGCACGATGCTTCGTCCAGCGACGCGGCATTGAAATGCGTCAGGTCGATCTTGCCTTC 4485 Query 7057 GCGGACGGTCTCGTAATTGGTCAGGT--AGATGGTGGTGGGGTCG-TC------------ 7101 |||||| | || || |||||||||| || || | || || || Sbjct 4486 GCGGACAGATTCATAGTTGGTCAGGTACAGCTGCCCGCTCGGCCGATCCGCATGCAGCGA 4545 Query 7102 TACCTCGTCGAAACTGCGGATG--AACCGGACGGTGATGCCGAGCATCGCGGCGTCGCGG 7159 | |||| | |||||||||| || |||| | ||| |||||| |||||||| Sbjct 4546 GATCTCGGCCGTACTGCGGATGAAAATCGGA--TCCAGGCCCAGCATCAGCGCGTCGCGC 4603 Query 7160 TAGAACTCCTGGCGCACACCCAGCGGAATGGTGATGAGAGCGTAGCCG-CCGGCTAGGTC 7218 | ||| || |||| |||||| | | ||| || |||| || ||| || | Sbjct 4604 TTGAATTCGATCAGCACGGTCAGCGGCACGACGATCAGCTGCCGGCCGCCCAGCT-GGGC 4662 Query 7219 GC--GGGTGACGCGCACCACCTCAAGCTGCATTACCGACTTGCCCAGGCCGAAGGCCGCG 7276 || | || ||||| | ||| |||||||| |||||||||||||||||||| || ||| Sbjct 4663 GCCAAGCTG--GCGCATGATCTCCAGCTGCATGACCGACTTGCCCAGGCCGAACGCAGCG 4720 Query 7277 AAACAGGCCGCGCGGC 7292 | || |||||||| Sbjct 4721 A---AGATCGCGCGGC 4733 Score = 109 bits (120), Expect = 2e-19 Identities = 166/233 (71%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 4957 CAGCGCGCAGTACGGGACGGTCATGATCCCGCCGAAGGGATCGAAGACCAGGTCTCCTTC 5016 |||||||||| || || ||||| | |||||||| ||||| ||| |||||| || Sbjct 2370 CAGCGCGCAGG--GGCACCGTCATCAGGCCGCCGAACGGATCATAGATCAGGTCGCCCGG 2427 Query 5017 CATGGAGTACTGCACGATGGCCCGGTCGACGATGTCGAACTGCAGCGGGCACAGGTGCAT 5076 || | | | |||||| ||||||||||| ||||| |||| ||||| || ||| Sbjct 2428 GTTGCTCCAGTTCGTGATGGCGCGGTCGACGATATCGAAGGGCAGGGGGCATAGATGCTG 2487 Query 5077 TTCCTGGCCCTTGCTGTACTGCTGGGCGTTGAGCGTCCG-CATGCGGGCGACGTCGGTCC 5135 || |||||||| ||||| | |||| ||| | |||||| ||||| ||||||| Sbjct 2488 CTCGCGGCCCTTGGCCGACTGCATCGTGTTG-GCGCCATACATGCGCGCGACATCGGTCC 2546 Query 5136 ATACGTCCGGGTGCCAGGACTGCGGTGGCAGCAGCATGAAGCCGGTGGGCAGC 5188 | || || || |||||| |||| |||| |||| ||| ||||||||||| Sbjct 2547 AGACATCTGGATGCCAGCTCTGCACCGGCATCAGCGCGAAATCGGTGGGCAGC 2599 >seq7029 Length=148368 Score = 145 bits (160), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 21287 AAGCTGCTGGCGATGGAGCTTGGTATCCCCG-TGATCGTGCTGTCGCAGCTCAACCGCTC 21345 ||| ||||||| | |||| ||| | |||| |||| | ||||| ||||||||||| || Sbjct 76564 AAGATGCTGGCCAAGGAG-TTGCAGTGCCCGGTGATTGCCCTGTCCCAGCTCAACCGTTC 76622 Query 21346 CCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGAT 21405 |||||||||| | ||||||| || |||||||| ||||||||||| || || || || Sbjct 76623 GGTGGAGCAGCGCACCGACAAGCGCCCCATGATGTCCGACCTGCGCGAATCGGGCGCCAT 76682 Query 21406 CGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGTCTACCACCCGGATAC 21465 ||||||||| ||||| | ||||||||| | |||||||| || |||| || ||| | Sbjct 76683 CGAGCAGGATGCCGACATCATCATGTTCATCTACCGCGATGACTACTACAACAAGGACAG 76742 Query 21466 CCAGTACCGCGGCGTGGCTGAGTTGATCATCGCGAAGCACCGCAACGGC 21514 | || | | | | | || || | ||||||| ||||| || |||||| Sbjct 76743 CAAGGAGCCCAACATCGCCGAAGTCATCATCGGCAAGCAGCGTAACGGC 76791 >seq12095 Length=15812 Score = 120 bits (132), Expect = 1e-22 Identities = 145/197 (74%), Gaps = 3/197 (2%) Strand=Plus/Plus Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCG 21373 || ||||||| ||| ||||||||||||||||| ||||| ||| | ||||||| ||| Sbjct 1475 CCGGTGATCGCGCTTTCGCAGCTCAACCGCTCGCTGGAAACGCGTACCGACAAGCGCCCG 1534 Query 21374 ATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTC 21433 | ||| | || || ||||| || || || ||||||||||| || || ||||| | ||| Sbjct 1535 GTAATGGCCGATCTTCGCGAATCGGGCGCAATCGAGCAGGATGCGGACATGATCGTCTTC 1594 Query 21434 GTGTACCGCGACGAGGTCTACCACCCGG---ATACCCAGTACCGCGGCGTGGCTGAGTTG 21490 | ||||||||||| |||| || || || | | | || ||| |||| ||| | Sbjct 1595 ATCTACCGCGACGATTACTACAACAAGGAAAATTCGCCGGACAAGGGCCTGGCCGAGATC 1654 Query 21491 ATCATCGCGAAGCACCG 21507 ||||||| |||||||| Sbjct 1655 ATCATCGGCAAGCACCG 1671 >seq14232 Length=72504 Score = 113 bits (124), Expect = 1e-20 Identities = 204/299 (68%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 21155 CTGCGGGCCCTGGCCCGGCGTCACAAGCAGCGCCATGGGTTGAGCCTGCTGGTGGTGGAC 21214 ||||| ||| ||||| || | ||||| || |||| | | | | || || ||| Sbjct 61661 CTGCGCACCCGCGCCCGTCGCCTCAAGCGCCGTCATGATGTCGGTTTCATCGTCGTCGAC 61720 Query 21215 TACCTGCAGCTGCTGGAGAGCTCCGGCAAGTCC------ACTCGCACCGAGGACGTCAGC 21268 || || ||||||||| || || ||||||| | | |||| | | || | Sbjct 61721 TATCTCCAGCTGCTGCAGGGCAGCGGCAAGGCAGGCGATAGTCGCGTCAACGAAATTTCG 61780 Query 21269 GACATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTG 21328 || || ||||| | ||| | |||||| ||| ||| | |||||||| | | |||| Sbjct 61781 GAAATTTCCCGTGGTTTGAAGACGTTGGCGAAGGAACTTCATGTCCCCGTGCTGGCGCTG 61840 Query 21329 TCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCGATGATGTCGGACCTG 21388 |||||||||| ||| | |||| || || | ||||||| ||| | |||| ||||| Sbjct 61841 TCGCAGCTCAGCCGTGCGGTGGAACAACGCGAGGACAAGCGTCCGCAGCTGTCCGACCTT 61900 Query 21389 CGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGA 21447 ||||| || || |||||||||||||||| || || || |||||||| |||||| || Sbjct 61901 CGCGAATCGGGCTCGATCGAGCAGGACGCGGACATGGTCTGGTTCGTGTTCCGCGAGGA 61959 >seq9587 Length=50143 Score = 102 bits (112), Expect = 3e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 3390 GCGCCCTTCGAGTCCATCCAGCCGGGCAGCAGAGCGATTGCCTGGCAGGTGAGCAGCTTC 3449 |||||||| ||| | |||||| ||||||| || || | ||| || ||||| | Sbjct 17424 GCGCCCTTGGAGCCGCGCCAGCCAGGCAGCATGTAGACCGCATCGCATTTGCACAGCTGC 17483 Query 3450 TGCAGGTCGAGCCGCAGGTAGTCGGCCCACTCGAAGCCCGGAATCTCGCCGTGCTCGGCG 3509 |||| | || |||| |||| | ||||| | || || | || || |||||| Sbjct 17484 GGCAGCGCCAGACGCATGTAGCCAGCCCAACTGCCGCACGCTGGCGCGGGGTTCTCGGCC 17543 Query 3510 GGGTTCTCGACCTGGTACCCGAGGCCTCGCAG-GCGCGCGGCTTCGGCGTGGAACGCGGG 3568 ||||||||||| |||| || || | ||||| ||| ||||| || || ||| || || Sbjct 17544 GGGTTCTCGACGTGGTGGCCCTGGGCGCGCAGCGCG-GCGGCCGCGCGGTTGAAGGCCGG 17602 Query 3569 GAAGTTGTGTTCGGGCAGGCCAGTCATGGGGCCTGCGAGGTAGATGCGCT 3618 ||||| || |||||||| ||||| ||||| |||| ||||||||||| Sbjct 17603 ATAGTTGAACTCTGGCAGGCCTGTCATCGGGCCGGCGATGTAGATGCGCT 17652 >seq8493 Length=118667 Score = 100 bits (110), Expect = 9e-17 Identities = 159/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 47779 GTCCGCCAGGCAAAAGCAGAAGCTAAAGACTACACCCTCGCCGACATTGACGGCCTCTCT 47838 |||||||| || ||||| | || | |||||| || | ||||| || || ||||| Sbjct 17000 GTCCGCCAAGCCAAAGCCACCGGCAAGGCCTACACACTTCCAGACATCGATGGTCTCTCC 16941 Query 47839 CTCTTCGTTTCTCACAAGGGCACCAAAAGCTGGCACTTCCG---CTTTTCGCTGAATGGC 47895 || ||| | || ||||| ||| |||||||||||||| || | | |||| | Sbjct 16940 CTGGCCGTGACGGCCACGGGCAGCAAGAGCTGGCACTTCCGTTACTACTGGATGAAGG-- 16883 Query 47896 CAGCAGAAGCGAGTGTCGCTTGGGACGTATCCCGAGTTGAGCCTGCGTGATGCCCGGCAG 47955 ||| ||||| ||||||| || || ||||||||| || ||| ||||| || || Sbjct 16882 -AGCCCAAGCGCATGTCGCTGGGCACCTATCCCGAGGTGTCCCTTCGTGAGGCACGCGCC 16824 Query 47956 CGCCGTGACGAGGCGCGTTCGTTGGTGGCCCAAGGTATCGATCCGCG 48002 | |||||||||||||| | ||||||||| | | ||| | ||||| Sbjct 16823 CTGCGTGACGAGGCGCGCGCCTTGGTGGCCAAGGACATCAACCCGCG 16777 >seq12839 Length=204338 Score = 93.3 bits (102), Expect = 1e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 53982 ACTGGATTTAGGTTCCAGCGCCGCAAGGTGTGAGAGTTCGAGTCTCTCCGTCCCCACCA 54040 Score = 93.3 bits (102), Expect = 1e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594 || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| Sbjct 54218 ACTGGATTTAGGTTCCAGCGCCGCAAGGTGTGAGAGTTCGAGTCTCTCCGTCCCCACCA 54276 Score = 87.8 bits (96), Expect = 6e-13 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 21313 CCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACC 21372 ||| || || | ||||| ||||| ||||| || ||||| | || || || || || || Sbjct 81898 CCCTGTTATTGCACTGTCACAGCTTAACCGTTCTCTGGAAAACCGTCCAAATAAACGTCC 81839 Query 21373 GATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTT 21432 | | ||||| ||| | || || || || || ||||||||||| |||||| | || ||||| Sbjct 81838 GGTAATGTCCGACTTACGTGAATCAGGTGCAATCGAGCAGGATGCCGATTTAATTATGTT 81779 Query 21433 CGTGTACCGCGACGAGGTCTA 21453 | ||||| || ||||| || Sbjct 81778 TATTTACCGTGATGAGGTTTA 81758 >seq10981 Length=80740 Score = 89.7 bits (98), Expect = 2e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 47536 ACAGGATTTAGGTTCCAGCGCCGCAAGGCGTGAGAGTTCGAGTCTCTCCGTCCGCACCA 47594 || ||||||||||||||||||||| |||||||||||||||||||||||| | ||||||| Sbjct 57901 ACTGGATTTAGGTTCCAGCGCCGCGAGGCGTGAGAGTTCGAGTCTCTCCTTTCGCACCA 57843 >seq10221 Length=130382 Score = 89.7 bits (98), Expect = 2e-13 Identities = 113/153 (74%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 21293 CTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAG 21352 ||||| | |||||| | |||| || |||| ||||||||||| || | ||| Sbjct 117908 CTGGCCAAGGAGCTGAGCGTCCCGGTCATCGCCCTGTCGCAGCTGTCGCGTCAGGTCGAG 117849 Query 21353 CAGCG-GCCGAACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411 ||||| | ||| |||||| ||| | | || |||||||| || ||||| |||||||||| Sbjct 117848 CAGCGCGACGA-CAAGCGGCCGCAGCTTTCCGACCTGCGTGAATCCGGCTCGATCGAGCA 117790 Query 21412 GGACGCCGATGTGATCATGTTCGTGTACCGCGA 21444 ||||||||| || || |||||| || ||||| Sbjct 117789 GGACGCCGACATGGTCTGGTTCGTCTATCGCGA 117757 >seq6988 Length=415921 Score = 86.0 bits (94), Expect = 2e-12 Identities = 112/153 (73%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 21294 TGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGC 21353 |||| | ||||||| | |||| || |||| ||||| ||||| | ||| || | | Sbjct 345962 TGGCCAAGGAGCTTAGCGTCCCGGTCATCGCCCTGTCCCAGCT--ATCGCGCCAGGTCGA 345905 Query 21354 AGCGGCCGA--ACAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCA 21411 |||| ||| | ||||| || ||||||||||||| || || || |||||||||| Sbjct 345904 AGCGCGCGACGATAAGCGCCCCCAATTGTCGGACCTGCGGGAATCGGGCTCGATCGAGCA 345845 Query 21412 GGACGCCGATGTGATCATGTTCGTGTACCGCGA 21444 ||| ||||| || || ||||||||||||||| Sbjct 345844 GGATGCCGACATGGTCTGGTTCGTGTACCGCGA 345812 >seq8050 Length=287393 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA-ACAAGCGA 21370 |||| | |||| |||||| |||||| ||| | |||| ||| || | ||||||| Sbjct 96406 TCCCGATCATCGCGCTGTCACAGCTCTCCCGTGCGGTGGAA-AGCCGCGAAGACAAGCGT 96348 Query 21371 CCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATG 21430 ||| | | || |||||||| || ||||| | ||||||||||||||||| ||| | || Sbjct 96347 CCGCAGCTTTCCGACCTGCGTGAATCCGGCTCCATCGAGCAGGACGCCGACGTGGTGCTG 96288 Query 21431 TTCGTGTACCGCGACGA 21447 ||||||| ||| || || Sbjct 96287 TTCGTGTTCCGTGAGGA 96271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157082304634526