Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_016767.1 Length=60714 Score E Sequences producing significant alignments: (Bits) Value seq11091 403 7e-108 seq9587 291 3e-74 seq9576 187 1e-42 seq11465 111 6e-20 seq10635 104 9e-18 seq1205 102 3e-17 seq9481 91.5 6e-14 seq823 86.0 2e-12 seq9795 82.4 3e-11 >seq11091 Length=75312 Score = 403 bits (446), Expect = 7e-108 Identities = 784/1152 (68%), Gaps = 18/1152 (2%) Strand=Plus/Minus Query 43894 CCAGCATGGCCCGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGT 43953 ||||||||| || ||||| ||||||| | ||||| | | |||||||| ||||||| Sbjct 74649 CCAGCATGGTGCGGGCGAACTTGTCCCAGCGCGCCATGCCAGCTCGCTTCTCTGGCATGT 74590 Query 43954 AGCTGTAGCGGTCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGT 44013 || | ||||||| ||| | ||||| ||||| ||| | ||||||||||| || | Sbjct 74589 AGTTCCAGCGGTCGTAGCTCTTGGAGCTAACGTCCTGCAGCGCATGGTTCTGAATGCGAT 74530 Query 44014 CCCCTTATCTCCTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGG 44073 | | || |||| || || || |||||||||| |||||| |||||||| ||||||| | Sbjct 74529 CGCGG-ATTTCCTTCGGCACGCCAGCCTTGCCTGACAGCGTCTTCCACGTTCGCCGCAAG 74471 Query 44074 TCGCGGTTCGTGATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAG 44133 ||||| || || | | |||| | ||||| ||||| || || ||||| | | || ||| Sbjct 74470 TCGCGATTGGTCACGACCGGGATGACGCCGCGGTCGCGCTGGCGCCACATGAAGGCATAA 74411 Query 44134 AGGGTGCCGTGACTGACGGGCTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGC 44193 || || || || |||||||||||| |||||| || ||||||||||||||| || || Sbjct 74410 AGCGTCCCATGGCTGACGGGCTTCGATGGATCCTTCGCCGAGGGGAAGAACCACCCATGT 74351 Query 44194 TCGTTCGTGCCGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGA 44253 ||||||| || || || ||||| || | ||||| | |||| || ||| Sbjct 74350 TCGTTCGGCTTAATGGAATCGAGAAGCTCCGCCGCCAAGGACGGAACAGGGACCGCATGA 74291 Query 44254 GGCTTCCCGTTCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTGTCGTACTGGTCC 44313 ||||| | |||||| || |||||||||||||| | | ||| || |||| ||| Sbjct 74290 GGCTTGCTGTTCTTGGTTTTTGACCAGTCGAGAATTCGTTCGCGGGAATCCCACTGATCC 74231 Query 44314 CGGTGCAGGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCATGGCG 44373 ||| ||| || |||||||| || ||||| || ||||||||||| | | | ||| Sbjct 74230 TTGTGAAGGCGCGCGATTTCCTCGACCCGCTGGCCCGTGAGCATCAGGATCTGAACGGCC 74171 Query 44374 TCAAGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAG 44433 || || || || | ||| ||| ||| | | ||||| ||| | || Sbjct 74170 CGCAGATAGGGCGGGTGCACCGGCACGTCGGGGCATTCGAGCCATCGCCAGAGCTGGACA 74111 Query 44434 TAGTCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCC 44493 | || | || ||||| || | || || ||||||||||| || ||||| ||| Sbjct 74110 AACTCATCTTCGTCCAGCCACCGGGACCCGACGACCTTAGGCTCAGTCGGGATACCTGCC 74051 Query 44494 GCCGGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGAT 44553 ||||| |||| | || || |||||||| || || ||||| |||||||| Sbjct 74050 GCCGGATTGTAGACCAGTCGAAATCGGCGCGGCGACGTGTTTCGATAGTCGTGCTCCGAT 73991 Query 44554 TTCAGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTT 44613 |||| ||||| | | || || ||||||||| |||| |||||||||||||||| Sbjct 73990 TTCATTCCCCAGCTGTAAGCTGCGCGGATGTAGCAGCGGACGTGGTCCGCCATGGCAGGG 73931 Query 44614 TTGCCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGG 44673 || ||||| ||||| || |||||||| | | ||| || || |||||||| || ||| Sbjct 73930 GCCCCACGCTCAAAGATCGGGCGGAGCACCTCCGTCACCTCGTCCGGCTCGATCTCCCGG 73871 Query 44674 GCGAGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTC 44729 || |||||||| || || ||| || | | || | ||| || |||| || |||| Sbjct 73870 GCAAGGCGGTTGCGCCCAAGAGTGTCGGCTACCTTGTTCAGTCCTTTCTCCGTTTCCTTC 73811 Query 44730 CACGA-AGCT--CATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTC 44786 || || ||| | | | | ||||| ||| | |||||||| ||||| ||||| Sbjct 73810 CAGGACGGCTTACCTGCTTCTTTGAGC---GAGG----CGACGTAGGCTTCGAAAAGGTC 73758 Query 44787 GCCAACGGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGAT 44846 | | ||||| || ||||| || || | | |||||| |||||| | ||| Sbjct 73757 GGCGACGGTTCCGGGCCG---AGCATCGGTGACGATCTTGATGCTCCGACCCTTCTGGAT 73701 Query 44847 GGCCGTGGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGCCAGCGTCATGTGGGGGTA 44906 || | ||||||||| ||| ||||| ||||| || |||| ||| || || Sbjct 73700 CGCGTCCGCGAAGTCGCGCTTGAAAACCTCTCGGGCTGCGGCGAGCGACATCGATGGATA 73641 Query 44907 GTCGCCCATCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTCGT 44966 |||||| | |||| | | |||||| ||||||||| ||||| || ||| || Sbjct 73640 GTCGCCGAGTTTCGCCTTGATCCGCTTACCGTCGCGCCATTGCTGGGCCATCCATTCCGC 73581 Query 44967 CGTGACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTTC 45026 | || || ||||||| ||| | || ||| || |||||||| |||||||| || || Sbjct 73580 CAGCACCCGCTTAGGCATCGGCCGCACGACGAGGACCAGGCGGCCCACGCCGCGTCCCTC 73521 Query 45027 ACCATCGGCCAG 45038 || |||||||| Sbjct 73520 GCCGTCGGCCAG 73509 >seq9587 Length=50143 Score = 291 bits (322), Expect = 3e-74 Identities = 663/980 (68%), Gaps = 38/980 (4%) Strand=Plus/Minus Query 1398 CCGTTCAAGCCCAACAGAGCGCAGCGCCGGCTCATCAAGCGGAT---GCACAGCCGCAAC 1454 || ||| |||||| | |||||| || |||||| ||| | |||| |||||| Sbjct 14414 CCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCAC---CGCAAC 14358 Query 1455 ATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGTTCCTATGTATCTTCTTCCTCGAC 1514 |||||||||||||| || ||||| ||||| || || | | ||| | | || ||| Sbjct 14357 ATCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGAC 14298 Query 1515 TGCACCCTGTTCCGGCCGAACGTGCGCGCCGGCATCATCGCCCACGAAGAGGACGCGGCG 1574 | |||||| || | |||| |||||||||||| ||||| || | || Sbjct 14297 CATGCGCTGTTCAATGCGGATCAGCGCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238 Query 1575 AAGGCCATCTTCCGAGACAAGGTGAAGTTCGCCTACCTCAACCTGCCGGCTCACCTGCGC 1634 ||||||||||||| ||||||||||||| ||||||| |||||||| | | | || Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCGA 14178 Query 1635 GAGGTGATGCCCCTGAAGCGTGACGCAGCTGAAGAGCTTCTGTTCGCCCACAACAACAGC 1694 || | |||||| |||| ||| || | ||||| ||||||||||||||||||||| Sbjct 14177 GACCGCTTCCCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAACAACAGC 14118 Query 1695 TCGATCCGCGTCTCCACGTCGATGCGTTCGGGCACCATGCAGTACCTGCACATTTCCGAG 1754 | ||||| | ||||| ||||| |||||||| || || || ||| | ||||| Sbjct 14117 AGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGTCTCCGAA 14058 Query 1755 TTCGGGAAGATATGCGCCAAGCGT-CCGGACAGGGCCGAAGAGGT--TGTCCGAGGCTCT 1811 | || ||||| | || || || | ||| | | |||| | ||||| || || ||||| Sbjct 14057 CTGGGCAAGATCT-CGGCACGCTTCCCGCATAAGGCCAAGGAGGTGATGACC--GGCTCC 14001 Query 1812 ATCCCTACCGTTCCCACCCGAGGCGGGATGCTCTTCATTGAGAGCACGGCAGAAGGCCGG 1871 || || |||| |||||| ||| || || | || ||||||||||| || ||| Sbjct 14000 ATTCCGGCCGTGCCCACC---ACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGCC 13944 Query 1872 GACGGTCACTTCTACAAGATGACCACGAAGGCCGAACAGCTCGCGC-AGCTGGGCCGCAG 1930 |||| | |||||| | || || | |||||| || || | | | | | Sbjct 13943 AACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGCCCT-GCACTACACGCACAAGAA 13885 Query 1931 GCTCACCCCCAAGGAGTACCGCTTCCACTTCTTCCCATGGTGGCAGGAGTCGAACTACCG 1990 ||| | ||| || || ||||||||||||| | | |||||||||||| | |||||||| Sbjct 13884 GCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTACCG 13825 Query 1991 CATGGACCCGGAAGGCGTGGT-CATCAGCCGGGC-AG-ACCATGAGTATTTCGACAAGGT 2047 ||||||| || ||| |||| ||| || || || | || || ||||||||| |||| Sbjct 13824 CATGGACGCG---GGCCTGGTCCATGTCGCGCGCGAGCAGCACGACTATTTCGACCAGGT 13768 Query 2048 AGAGGGCATCATGGGATGCTCGATCGACATCGAGCAGCGCGCATGGTGGATAGCGACCCG 2107 |||| | ||| ||| | ||||| | || ||||| || |||| | || |||| Sbjct 13767 CGAGGTCGAGATGCAGTGCACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCCACCCA 13708 Query 2108 CGACAACGACTTCTCCGGAGAGGAAGAGTCGATGTGGCAGGAGTACCCATCCACACCGGC 2167 || |||||| |||| | | ||| ||||||||||||||||| ||||| ||||| Sbjct 13707 GGAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACGCCGGC 13648 Query 2168 CGAAGCCTTTCAGGTGTCCAATAAGGGCTGCTACTATGCGGTCCAGATGGCGAAGG-TGC 2226 ||| || || ||| ||||| |||| | ||||| || | ||| | || ||| Sbjct 13647 CGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGC------CAAGGCCATGGTTGC 13594 Query 2227 G----CAAAGAGAAGC-GCCTCACGCGGGTACCGTTCGAGCCGGGCTATCCGGTTAACAC 2281 | | ||| | || || |||| ||| || ||||| || ||||| |||| Sbjct 13593 GCTCACGAAGCGCGGCGGCATCACCTCGGTGCC---CGAGCTGGATCTGCCGGTCTACAC 13537 Query 2282 CTTCTGGGACATCGGGGCAGGCGACGGCACGGCCATCTGGTTCCACCAGCAGGTTGGCGT 2341 |||||||| |||||| | ||||| ||||||||||||||| ||| | ||| Sbjct 13536 ATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTGCGCGG 13477 Query 2342 GCAGCATCGCTTCATCAACT 2361 || | ||||||||||||| Sbjct 13476 CGAGGACCGCTTCATCAACT 13457 >seq9576 Length=119252 Score = 187 bits (206), Expect = 1e-42 Identities = 787/1223 (64%), Gaps = 36/1223 (3%) Strand=Plus/Minus Query 43905 CGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGTAGCTGTAGCGG 43964 || ||||| |||||||| || ||| || | || ||||| ||||||||||| | || Sbjct 116563 CGGACGAAGTTGTCCCATTGCTTCATCGCGGCACGTTTCTCAGGCATGTAGCTCCACCGA 116504 Query 43965 TCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGTCCCCTTATCTC 44024 || || ||| || || || || | | |||||||||| || || | || || Sbjct 116503 TCGTACGCTTTCGAACTCACATCCTGGAGCGTGTGGTTCTGAATGCGATCGCGG-ATTTC 116445 Query 44025 CTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGGTCGCGGTTCGT 44084 || | | || || || || || ||||| ||||| |||||||| ||||| || || || Sbjct 116444 CTTTGATAAACCCGCTTTCCCGGCAAGCGTCTTCCAGGTCCGCCGTAGGTCCCGATTGGT 116385 Query 44085 GATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAGAGGGTGCCGTG 44144 | || | || | || ||||| || ||||| | | | ||||| || ||| Sbjct 116384 CACTATGGGGATGACCTCGCGCTCCCGCTGGCGCCAGATGAAGCTGTAGAGCGTCTGGTG 116325 Query 44145 ACTGACGGG-CTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGCTCGTTCGTGC 44203 ||||| || | || ||| |||||| || ||| |||| |||||||| ||||| Sbjct 116324 GCTGACAGGTCGGCTAGGG-TCCATCGCCGGGGGAAAGAGCCAGCCGTAACTGTTCGGCT 116266 Query 44204 CGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGAGGCTTCCCGT 44263 || |||||| || || || | || | || || | ||| ||||| || | Sbjct 116265 TAATCGCGTCCAAGAGTTCAGCCGCAACATTGGGTACGGGAATAGCGTGTGGCTTGCCAT 116206 Query 44264 TCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTGTCGTAC---TGGTCCCGGTGCA 44320 |||| ||||| ||||| ||||| | || ||| |||| ||| | ||||| ||| | Sbjct 116205 TCTTGGTCTTCGACCAATCGAGGATCCTTTC---CTTGGCGTCCCATTGGTCGACGTGTA 116149 Query 44321 GGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCA-TG---GCGTCA 44376 || || || || || |||||||| || || | ||| | |||||| | || |||| Sbjct 116148 GGCGCGCGATCTCGTCGACGCGCTGACCTGTCAACATGATCAGGCGAACTGCACGCGT-- 116091 Query 44377 AGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAGTAG 44436 |||||| || | ||| |||||||| | ||||||| | | ||| | | | Sbjct 116090 --GTACGGCGGGTGCACCGGCGTGTCCGGGCATTCCAGCCAACGATAGAGGCGACGGAAC 116033 Query 44437 TCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCCGCC 44496 ||| | || |||||| || ||| || | |||||| || || || ||| || Sbjct 116032 TCCTCTTCGTCGAGCCATCGGTTGCTGGGAACATAAGGCTCAGTTGGAATGCTGGCGGCA 115973 Query 44497 GGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGATTTC 44556 || || || | || ||| || ||||| | || |||||||| | || || || Sbjct 115972 GGATTATGCACTAGACCGAAGCGCCGCGGCGTTGTGCTTCGGTAGTCGTGTTCTGACTTG 115913 Query 44557 AGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTTTTG 44616 || ||||| ||| |||| |||||| || | |||||||| ||||| || Sbjct 115912 AGGCCCCAACTGAACGCCGACCGGATATATCCTCTGACGTGGTCGGCCATCGAACGGGCC 115853 Query 44617 CCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGGGCG 44676 || || || | || || |||| || | | | || | ||| ||||||||| ||| Sbjct 115852 CCACGATCATATATCGGACGGATGACATCGACGATCTCGACCGGCGTGATGTCGCGCGCG 115793 Query 44677 AGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTCCAC 44732 |||| | ||||| || || | || || | || ||||| | || |||||| Sbjct 115792 GGGCGATGGCGGCCCAGCGTGTCAGCAATCTTGTTCAATCCCTTTTCCGTCTCCTTCCAA 115733 Query 44733 GAAGCTCATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTCGCCAAC 44792 || || |||||| | ||| |||| | ||||| ||||| ||||| | || Sbjct 115732 GATGCC----TTCCCCGATGACTTAAGGTGGCCCGTATAGGCCTCGAAGAGGTCAGCGAC 115677 Query 44793 GGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGATGGCCGT 44852 |||||| | || |||| ||| |||| ||||| | || |||| ||| || || Sbjct 115676 GGTGCCGGCGCGCGTGTC---GCCCACCACTTTGAT-GCTGCGTCCTTTTTGGATGCTGT 115621 Query 44853 -GGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGC-CAGCGTCATGTGGGGGTAGTCG 44910 || ||||| || || | ||||| | ||| |||| ||| | ||| || || | Sbjct 115620 CGGCAAAGTCACGCTCGTAGACCTCCCTGGCT-TCGCGCAGAGACATCGACGGATAAGTG 115562 Query 44911 CCCATCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTCGTC-GT 44969 || ||||| | || ||| | ||||||||||| ||||| ||| ||| | || Sbjct 115561 CCGATCTTTCGCCGAGTACGCCTGCCATCGCGCCACTGTTGCGCCATCCA-ATCGGCGGT 115503 Query 44970 GACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTTCACC 45029 |||||| || ||||| ||| | || |||| | | |||||| ||| ||||| || || Sbjct 115502 GACGCGAGTTGGCATCGGCCTAATCATGATGATCAACCGGCCGGTGCCACGCCCCTCTCC 115443 Query 45030 ATCGGCCAGTGTGGCCTGCTTCCGGCTCTTCTCAACCCGTTTGATAGCGTTCCGGATCTG 45089 ||| ||||| | | || |||| || || ||||| |||| ||| |||| | Sbjct 115442 ATCAGCCAGCGCGACCGCCTTCTGGGACTGTTCAACTTCCTTGAGCGCGCGACGGAGCGC 115383 Query 45090 TCCGTCTGTCAGCGCT-GGCATG 45111 |||||||| || ||| |||||| Sbjct 115382 GCCGTCTGTGAG-GCTCGGCATG 115361 >seq11465 Length=2819 Score = 111 bits (122), Expect = 6e-20 Identities = 307/459 (67%), Gaps = 30/459 (7%) Strand=Plus/Minus Query 1440 ATGCACAGCCGCAACATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGTTCCTATGT 1499 ||||||| || || | ||||| || || ||||||| |||||| || || ||| | Sbjct 2727 ATGCACAACCAGAATGTGATCCTCAAAGCGCGCCAGCGCGGCTTCACCACCTTCATCCAG 2668 Query 1500 ATCTTCTTCCTCGACTGCACCCTGTTCCGGCCGAACGTGCGCGCCGGCATCATCGCCCAC 1559 | ||| | |||||| | | | ||| |||| ||||| |||||||||| Sbjct 2667 CTGTTCATGCTCGACGCCTGCGTCTTC------AACG------CCGGCTCCATCGCCCAC 2620 Query 1560 GAAGAGGACGCG-GCGAAGGCCATCTTCCGAGACAAGGTGAAGTTCGCCTACCTCAACCT 1618 | | | || ||| ||| |||||||| ||||||||| || |||| |||||| Sbjct 2619 -ACGCTGTCGGACGCGCAGGTGATCTTCCGCGACAAGGTGCGTTTTCCCTATGACAACCT 2561 Query 1619 GCCGGCTCACCTGCGCGA-GGTGATGCCCCTGAAGCGTGA-CG-CAGCTGAAG--AGCTT 1673 ||| | | | | || |||| | ||| | ||||| || || | || || | Sbjct 2560 GCCCGACGGCAT-CAAGACGGTGGTCCCCAT----CGTGAACGACAACGCCAGTGAGTTG 2506 Query 1674 CTGTTCGCCCACAACAACAGCTCGATCCGCGTCTCCACGTCGATGCGTTCGGGCACCATG 1733 ||| ||| | ||||| | || ||||||||||| || ||| |||| || ||||| || Sbjct 2505 CTGCTCGGCAACAACTCCGGC---ATCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTG 2449 Query 1734 CAGTACCTGCACATTTCCGAGTTCGGGAAGATATGCGCCAAGCGTCCGGACAGGGCCGAA 1793 |||||||||||| | ||||| | ||| ||||| |||||||| |||||||| ||| Sbjct 2448 CAGTACCTGCACGTCTCCGAATACGGCAAGATCTGCGCCAAATATCCGGACAAGGCGCGC 2389 Query 1794 GAGGTTGTCCGAGGCTCTATCCCTACCGTTCCCACCCGAGGCGGGATGCTCTTCATTGAG 1853 ||||| | ||| | || ||||| || || | | || | ||||| ||| Sbjct 2388 GAGGTGCGCTCCGGCGCGCTCAACACCGT--GGACAAGA-ACCAGCTGGTGTTCATCGAG 2332 Query 1854 AGCACGGCAGAAGGCCGGGACGGTCACTTCTACAAGATG 1892 |||||||| || |||| |||||| ||||||| | || || Sbjct 2331 AGCACGGCGGAGGGCCAGGACGGCCACTTCTTCGAGCTG 2293 >seq10635 Length=172665 Score = 104 bits (114), Expect = 9e-18 Identities = 176/252 (70%), Gaps = 10/252 (4%) Strand=Plus/Plus Query 36020 AGCTCATCGACCGGGGCATCCCAGAGGCCGAGATCGCCTTCATCCACGACGCGAACACCG 36079 |||| ||| | |||| | || | | |||||||||||||||| || ||| || | Sbjct 171932 AGCTGATCCGCATGGGCGTGCCGGCGTCCGAGATCGCCTTCATGCAGGACTACAAGA--- 171988 Query 36080 AGCTTCAGA----AAGAAGAGC-TGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCT 36134 || || || ||| || || |||||||| | || ||| ||||| || ||| |||| Sbjct 171989 AG--TCGGAGGCGAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTCCT 172046 Query 36135 GTTCGGCTCCACGGCTAAGATGGGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCT 36194 | |||||||| | | || |||||| ||||| | |||| ||| | | ||| ||| || Sbjct 172047 GATCGGCTCCTCCGATACGATGGGCACCGGCGTCAACGCGCAGCTCCGCCTGAAGGCGCT 172106 Query 36195 CCACCACCTCGACGCACCATGGCGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCAT 36254 || |||||||||| || |||| ||| || | ||| ||||||||||| || ||| Sbjct 172107 GCATCACCTCGACGTGCCCTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGATCGA 172166 Query 36255 CCGTCAGGGTAA 36266 || ||||| || Sbjct 172167 GCGCCAGGGCAA 172178 >seq1205 Length=48877 Score = 102 bits (112), Expect = 3e-17 Identities = 172/246 (70%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 516 CCGACGAACGACGGCGGCTATGGCTTCAACCCTAAGCGCGAGCCTCATCCCGAGTGCCCG 575 ||||| |||| |||||||||||||||| | ||| || || || || || |||||| Sbjct 35337 CCGACCGACGATGGCGGCTATGGCTTCAGCAAGAAGGCTGATCCGCACCCTGACTGCCCG 35396 Query 576 AACTGCGACGGTGACGGCTATGGCCACATGCACGTCGAGGACACGCGCTTCCTCTCCGGA 635 | |||| ||| || || | | | || || | | ||||||||| || || Sbjct 35397 ATGTGCGGCGGCGAAGGGTGCGAGGATGTGTTCGCCCACGACACGCGCCAACTGCTGGGC 35456 Query 636 CCTGCGCGGATGCTCTATGCCGGCATGGAAATGACGAAGGAGGGCATCAAGCCCAAGATG 695 | ||||| |||||||||||||| || | || |||||||| ||| | || ||||||| Sbjct 35457 GCCGCGCGCCTGCTCTATGCCGGCGTGAAGATCACGAAGGATGGCCTTGAGATCAAGATG 35516 Query 696 CACGACCAG---ATGGCCGCTGCGCAGATGGTGGCCCGTCACCTCGGCATGTTCAACGAT 752 | || ||| | || |||| | ||| || ||||| ||||| ||||||||||| || Sbjct 35517 AAGGATCAGGACAAGG-CGCT--GGAGAATGTCGCCCGGCACCTGGGCATGTTCAAGGAC 35573 Query 753 AAGCTC 758 ||| || Sbjct 35574 AAGGTC 35579 Score = 96.9 bits (106), Expect = 1e-15 Identities = 194/282 (69%), Gaps = 18/282 (6%) Strand=Plus/Plus Query 52183 GCGCTGGGCCGGCTGAAGCAGGGCGAGAAGAACAACACCGAACAGGCCTACGAGGACCAT 52242 ||||||||||| || ||| ||||||||||||||| | || ||| || ||||||| | Sbjct 32983 GCGCTGGGCCGCCTCAAGACGGGCGAGAAGAACAAGTCGGAGCAGCGCTTCGAGGACGAG 33042 Query 52243 CTGGAGTGGC---GAAAGCACGTCGGGGAAATCCTCTGGTACAAGTTCGAGGGCGTGAAG 52299 | | | | | | || | ||||| |||||||||||| ||||||||| | ||| Sbjct 33043 GTCCTGCGCCCCGGCATGCTGGCAGGGGATATCCTCTGGTACCGTTTCGAGGGCATCAAG 33102 Query 52300 CTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTC---GTCATGCTCGCGAAC 52356 || || ||||| || ||||||||| || || | ||||| |||||| ||| ||| Sbjct 33103 CTGCGCCTGGCCGATAACACCTTCCTGAC---CGTCGATTTCGCGGTCATGGGCGCCAAC 33159 Query 52357 GGC--CAGCTGGA-GGCCCACG---AGGTGA---AAGGCTTCTGGACCGACGATGCCCGC 52407 || || | || | | ||| ||| | ||| | || || || || ||| Sbjct 33160 AGCATCATCACGATGATCGACGTCAAGGGCAGCGAAGCCGTCATCCAGGAAGACGCGCGC 33219 Query 52408 GTGAAAATCAAGGTCGCGGCCGATCTCTATCCGTTCCGCTTC 52449 ||||| || |||||||| ||||| |||||| ||||||||| Sbjct 33220 GTGAAGATGAAGGTCGCCGCCGAAGCCTATCCCTTCCGCTTC 33261 >seq9481 Length=228138 Score = 91.5 bits (100), Expect = 6e-14 Identities = 125/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 36097 CTGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGATG 36156 ||||||||| | |||||| ||||| || || | || |||| ||| ||| | ||| Sbjct 6640 CTGTTCGGCGATGTCCGCGCCGGCAAGGTGCGTTTTCTCATCGGTTCCTCGGAAACCATG 6581 Query 36157 GGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCTCCACCACCTCGACGCACCATGG 36216 || ||||| | || | |||| || || ||| |||||||| ||||||| |||||| Sbjct 6580 GGCACCGGCGTCAATGCGCAACTTCGGTTGAAGGCGCTCCACCATCTCGACGTGCCATGG 6521 Query 36217 CGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCATCCGTCAGGGTAACGAGC 36271 | ||||| | |||| |||||||||||| | ||| | || || || ||| ||| Sbjct 6520 CTGCCGTCGCAGATCGAGCAGCGCGAGGGCAGGATCGTTCGCCAAGGCAACCAGC 6466 >seq823 Length=9660 Score = 86.0 bits (94), Expect = 2e-12 Identities = 99/131 (76%), Gaps = 2/131 (2%) Strand=Plus/Minus Query 30316 GTACCGCGCGAGCAGATGCCGCAGATTAAGACCGAGCACCGGGGCGCGCTGGTGAACTTC 30375 || ||||||| | ||||||||||||| |||||||||| ||||| |||| |||||| Sbjct 9594 GTGCCGCGCGCGGAGATGCCGCAGATCCGAGCCGAGCACCGCGGCGCCATGGTCAACTTC 9535 Query 30376 CTGAATGCTCGAGGCATCGAGCACGAGGAAAAGACCGT-CAACCCTGACACCCTGAAGCC 30434 ||||||| || ||||| | ||| |||| ||| ||| || ||| || || ||||| Sbjct 9534 ATGAATGCCCGCGGCATTGCTCACCAGGAGGAGAGCGTGCAGGCCT-CCAGTCTCAAGCC 9476 Query 30435 GACGCAGGCGG 30445 || ||||||| Sbjct 9475 CACCCAGGCGG 9465 >seq9795 Length=220374 Score = 82.4 bits (90), Expect = 3e-11 Identities = 131/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 9004 CAGAAGGCGGCCGCAGCTGCTGAAGGCAAGAACAACCCGATCTTTAAGGGCGGGCTGGGC 9063 || || || || ||||| || |||||| |||||||| ||||||| || || ||||| Sbjct 176667 CAAAAAGCAGCAGCAGCGGCAGAAGGCCGTAACAACCCACTCTTTAAAGGTGGTTTGGGC 176608 Query 9064 ATGATTAACAACGCCGTGCTGCACTCGCACGAGTCCGTCATCCGTATGAACGACTACGGT 9123 ||| ||||||| | | |||||||| || | ||| ||| | |||||||||| Sbjct 176607 ATGTACAACAACGTCATCCTGCACTCACATCAAAGCGTGATCAACTTTGCCGACTACGGT 176548 Query 9124 GCCGGCCAGAACGTGCAGGCAGCTCGCGCGCTGTTCCTCGGCCGTCAGGCAGCTGTCATC 9183 ||||| ||| | ||| | || || ||||| | || ||||| |||| ||| || Sbjct 176547 GCCGGTGCCAACTTAACGGCTGGCCGTGCCTTGTTCTTAGGTCGTCAAGCAGGTGTGATT 176488 Query 9184 GCCTACGG 9191 ||||| || Sbjct 176487 GCCTATGG 176480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 194128478644408