Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_016767.1
Length=60714
Score E
Sequences producing significant alignments: (Bits) Value
seq11091 403 7e-108
seq9587 291 3e-74
seq9576 187 1e-42
seq11465 111 6e-20
seq10635 104 9e-18
seq1205 102 3e-17
seq9481 91.5 6e-14
seq823 86.0 2e-12
seq9795 82.4 3e-11
>seq11091
Length=75312
Score = 403 bits (446), Expect = 7e-108
Identities = 784/1152 (68%), Gaps = 18/1152 (2%)
Strand=Plus/Minus
Query 43894 CCAGCATGGCCCGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGT 43953
||||||||| || ||||| ||||||| | ||||| | | |||||||| |||||||
Sbjct 74649 CCAGCATGGTGCGGGCGAACTTGTCCCAGCGCGCCATGCCAGCTCGCTTCTCTGGCATGT 74590
Query 43954 AGCTGTAGCGGTCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGT 44013
|| | ||||||| ||| | ||||| ||||| ||| | ||||||||||| || |
Sbjct 74589 AGTTCCAGCGGTCGTAGCTCTTGGAGCTAACGTCCTGCAGCGCATGGTTCTGAATGCGAT 74530
Query 44014 CCCCTTATCTCCTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGG 44073
| | || |||| || || || |||||||||| |||||| |||||||| ||||||| |
Sbjct 74529 CGCGG-ATTTCCTTCGGCACGCCAGCCTTGCCTGACAGCGTCTTCCACGTTCGCCGCAAG 74471
Query 44074 TCGCGGTTCGTGATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAG 44133
||||| || || | | |||| | ||||| ||||| || || ||||| | | || |||
Sbjct 74470 TCGCGATTGGTCACGACCGGGATGACGCCGCGGTCGCGCTGGCGCCACATGAAGGCATAA 74411
Query 44134 AGGGTGCCGTGACTGACGGGCTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGC 44193
|| || || || |||||||||||| |||||| || ||||||||||||||| || ||
Sbjct 74410 AGCGTCCCATGGCTGACGGGCTTCGATGGATCCTTCGCCGAGGGGAAGAACCACCCATGT 74351
Query 44194 TCGTTCGTGCCGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGA 44253
||||||| || || || ||||| || | ||||| | |||| || |||
Sbjct 74350 TCGTTCGGCTTAATGGAATCGAGAAGCTCCGCCGCCAAGGACGGAACAGGGACCGCATGA 74291
Query 44254 GGCTTCCCGTTCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTGTCGTACTGGTCC 44313
||||| | |||||| || |||||||||||||| | | ||| || |||| |||
Sbjct 74290 GGCTTGCTGTTCTTGGTTTTTGACCAGTCGAGAATTCGTTCGCGGGAATCCCACTGATCC 74231
Query 44314 CGGTGCAGGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCATGGCG 44373
||| ||| || |||||||| || ||||| || ||||||||||| | | | |||
Sbjct 74230 TTGTGAAGGCGCGCGATTTCCTCGACCCGCTGGCCCGTGAGCATCAGGATCTGAACGGCC 74171
Query 44374 TCAAGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAG 44433
|| || || || | ||| ||| ||| | | ||||| ||| | ||
Sbjct 74170 CGCAGATAGGGCGGGTGCACCGGCACGTCGGGGCATTCGAGCCATCGCCAGAGCTGGACA 74111
Query 44434 TAGTCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCC 44493
| || | || ||||| || | || || ||||||||||| || ||||| |||
Sbjct 74110 AACTCATCTTCGTCCAGCCACCGGGACCCGACGACCTTAGGCTCAGTCGGGATACCTGCC 74051
Query 44494 GCCGGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGAT 44553
||||| |||| | || || |||||||| || || ||||| ||||||||
Sbjct 74050 GCCGGATTGTAGACCAGTCGAAATCGGCGCGGCGACGTGTTTCGATAGTCGTGCTCCGAT 73991
Query 44554 TTCAGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTT 44613
|||| ||||| | | || || ||||||||| |||| ||||||||||||||||
Sbjct 73990 TTCATTCCCCAGCTGTAAGCTGCGCGGATGTAGCAGCGGACGTGGTCCGCCATGGCAGGG 73931
Query 44614 TTGCCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGG 44673
|| ||||| ||||| || |||||||| | | ||| || || |||||||| || |||
Sbjct 73930 GCCCCACGCTCAAAGATCGGGCGGAGCACCTCCGTCACCTCGTCCGGCTCGATCTCCCGG 73871
Query 44674 GCGAGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTC 44729
|| |||||||| || || ||| || | | || | ||| || |||| || ||||
Sbjct 73870 GCAAGGCGGTTGCGCCCAAGAGTGTCGGCTACCTTGTTCAGTCCTTTCTCCGTTTCCTTC 73811
Query 44730 CACGA-AGCT--CATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTC 44786
|| || ||| | | | | ||||| ||| | |||||||| ||||| |||||
Sbjct 73810 CAGGACGGCTTACCTGCTTCTTTGAGC---GAGG----CGACGTAGGCTTCGAAAAGGTC 73758
Query 44787 GCCAACGGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGAT 44846
| | ||||| || ||||| || || | | |||||| |||||| | |||
Sbjct 73757 GGCGACGGTTCCGGGCCG---AGCATCGGTGACGATCTTGATGCTCCGACCCTTCTGGAT 73701
Query 44847 GGCCGTGGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGCCAGCGTCATGTGGGGGTA 44906
|| | ||||||||| ||| ||||| ||||| || |||| ||| || ||
Sbjct 73700 CGCGTCCGCGAAGTCGCGCTTGAAAACCTCTCGGGCTGCGGCGAGCGACATCGATGGATA 73641
Query 44907 GTCGCCCATCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTCGT 44966
|||||| | |||| | | |||||| ||||||||| ||||| || ||| ||
Sbjct 73640 GTCGCCGAGTTTCGCCTTGATCCGCTTACCGTCGCGCCATTGCTGGGCCATCCATTCCGC 73581
Query 44967 CGTGACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTTC 45026
| || || ||||||| ||| | || ||| || |||||||| |||||||| || ||
Sbjct 73580 CAGCACCCGCTTAGGCATCGGCCGCACGACGAGGACCAGGCGGCCCACGCCGCGTCCCTC 73521
Query 45027 ACCATCGGCCAG 45038
|| ||||||||
Sbjct 73520 GCCGTCGGCCAG 73509
>seq9587
Length=50143
Score = 291 bits (322), Expect = 3e-74
Identities = 663/980 (68%), Gaps = 38/980 (4%)
Strand=Plus/Minus
Query 1398 CCGTTCAAGCCCAACAGAGCGCAGCGCCGGCTCATCAAGCGGAT---GCACAGCCGCAAC 1454
|| ||| |||||| | |||||| || |||||| ||| | |||| ||||||
Sbjct 14414 CCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCAC---CGCAAC 14358
Query 1455 ATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGTTCCTATGTATCTTCTTCCTCGAC 1514
|||||||||||||| || ||||| ||||| || || | | ||| | | || |||
Sbjct 14357 ATCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGAC 14298
Query 1515 TGCACCCTGTTCCGGCCGAACGTGCGCGCCGGCATCATCGCCCACGAAGAGGACGCGGCG 1574
| |||||| || | |||| |||||||||||| ||||| || | ||
Sbjct 14297 CATGCGCTGTTCAATGCGGATCAGCGCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238
Query 1575 AAGGCCATCTTCCGAGACAAGGTGAAGTTCGCCTACCTCAACCTGCCGGCTCACCTGCGC 1634
||||||||||||| ||||||||||||| ||||||| |||||||| | | | ||
Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGATTCGA 14178
Query 1635 GAGGTGATGCCCCTGAAGCGTGACGCAGCTGAAGAGCTTCTGTTCGCCCACAACAACAGC 1694
|| | |||||| |||| ||| || | ||||| |||||||||||||||||||||
Sbjct 14177 GACCGCTTCCCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAACAACAGC 14118
Query 1695 TCGATCCGCGTCTCCACGTCGATGCGTTCGGGCACCATGCAGTACCTGCACATTTCCGAG 1754
| ||||| | ||||| ||||| |||||||| || || || ||| | |||||
Sbjct 14117 AGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGTCTCCGAA 14058
Query 1755 TTCGGGAAGATATGCGCCAAGCGT-CCGGACAGGGCCGAAGAGGT--TGTCCGAGGCTCT 1811
| || ||||| | || || || | ||| | | |||| | ||||| || || |||||
Sbjct 14057 CTGGGCAAGATCT-CGGCACGCTTCCCGCATAAGGCCAAGGAGGTGATGACC--GGCTCC 14001
Query 1812 ATCCCTACCGTTCCCACCCGAGGCGGGATGCTCTTCATTGAGAGCACGGCAGAAGGCCGG 1871
|| || |||| |||||| ||| || || | || ||||||||||| || |||
Sbjct 14000 ATTCCGGCCGTGCCCACC---ACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGCC 13944
Query 1872 GACGGTCACTTCTACAAGATGACCACGAAGGCCGAACAGCTCGCGC-AGCTGGGCCGCAG 1930
|||| | |||||| | || || | |||||| || || | | | | |
Sbjct 13943 AACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGCCCT-GCACTACACGCACAAGAA 13885
Query 1931 GCTCACCCCCAAGGAGTACCGCTTCCACTTCTTCCCATGGTGGCAGGAGTCGAACTACCG 1990
||| | ||| || || ||||||||||||| | | |||||||||||| | ||||||||
Sbjct 13884 GCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAACTACCG 13825
Query 1991 CATGGACCCGGAAGGCGTGGT-CATCAGCCGGGC-AG-ACCATGAGTATTTCGACAAGGT 2047
||||||| || ||| |||| ||| || || || | || || ||||||||| ||||
Sbjct 13824 CATGGACGCG---GGCCTGGTCCATGTCGCGCGCGAGCAGCACGACTATTTCGACCAGGT 13768
Query 2048 AGAGGGCATCATGGGATGCTCGATCGACATCGAGCAGCGCGCATGGTGGATAGCGACCCG 2107
|||| | ||| ||| | ||||| | || ||||| || |||| | || ||||
Sbjct 13767 CGAGGTCGAGATGCAGTGCACCATCGATCTGGAACAGCGGGCCTGGTATGTGGCCACCCA 13708
Query 2108 CGACAACGACTTCTCCGGAGAGGAAGAGTCGATGTGGCAGGAGTACCCATCCACACCGGC 2167
|| |||||| |||| | | ||| ||||||||||||||||| ||||| |||||
Sbjct 13707 GGAGGCTGACTTCCCCGGTGCGCCTGAGCGCATGTGGCAGGAGTACCCCTCCACGCCGGC 13648
Query 2168 CGAAGCCTTTCAGGTGTCCAATAAGGGCTGCTACTATGCGGTCCAGATGGCGAAGG-TGC 2226
||| || || ||| ||||| |||| | ||||| || | ||| | || |||
Sbjct 13647 CGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGC------CAAGGCCATGGTTGC 13594
Query 2227 G----CAAAGAGAAGC-GCCTCACGCGGGTACCGTTCGAGCCGGGCTATCCGGTTAACAC 2281
| | ||| | || || |||| ||| || ||||| || ||||| ||||
Sbjct 13593 GCTCACGAAGCGCGGCGGCATCACCTCGGTGCC---CGAGCTGGATCTGCCGGTCTACAC 13537
Query 2282 CTTCTGGGACATCGGGGCAGGCGACGGCACGGCCATCTGGTTCCACCAGCAGGTTGGCGT 2341
|||||||| |||||| | ||||| ||||||||||||||| ||| | |||
Sbjct 13536 ATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCCTGCGCGG 13477
Query 2342 GCAGCATCGCTTCATCAACT 2361
|| | |||||||||||||
Sbjct 13476 CGAGGACCGCTTCATCAACT 13457
>seq9576
Length=119252
Score = 187 bits (206), Expect = 1e-42
Identities = 787/1223 (64%), Gaps = 36/1223 (3%)
Strand=Plus/Minus
Query 43905 CGCACGAACCTGTCCCATATCTCCATGGCCTCGCGCTTCTCGGGCATGTAGCTGTAGCGG 43964
|| ||||| |||||||| || ||| || | || ||||| ||||||||||| | ||
Sbjct 116563 CGGACGAAGTTGTCCCATTGCTTCATCGCGGCACGTTTCTCAGGCATGTAGCTCCACCGA 116504
Query 43965 TCATAGTGCCGCGAGCTGACGTCGTGCCGGCTATGGTTCTGAAGCCGGTCCCCTTATCTC 44024
|| || ||| || || || || | | |||||||||| || || | || ||
Sbjct 116503 TCGTACGCTTTCGAACTCACATCCTGGAGCGTGTGGTTCTGAATGCGATCGCGG-ATTTC 116445
Query 44025 CTGCGTCAGCCCGGCCTTGCCTGCCAGCGTTTTCCACGTCCGCCGCAGGTCGCGGTTCGT 44084
|| | | || || || || || ||||| ||||| |||||||| ||||| || || ||
Sbjct 116444 CTTTGATAAACCCGCTTTCCCGGCAAGCGTCTTCCAGGTCCGCCGTAGGTCCCGATTGGT 116385
Query 44085 GATGTCCGGCAGCACGCCCCGGTCCCGTTGCCGCCAAAGGGCGGAATAGAGGGTGCCGTG 44144
| || | || | || ||||| || ||||| | | | ||||| || |||
Sbjct 116384 CACTATGGGGATGACCTCGCGCTCCCGCTGGCGCCAGATGAAGCTGTAGAGCGTCTGGTG 116325
Query 44145 ACTGACGGG-CTTCTCGGGATCCATCTGCGAGGGGAAGAACCAGCCGTGCTCGTTCGTGC 44203
||||| || | || ||| |||||| || ||| |||| |||||||| |||||
Sbjct 116324 GCTGACAGGTCGGCTAGGG-TCCATCGCCGGGGGAAAGAGCCAGCCGTAACTGTTCGGCT 116266
Query 44204 CGATTTCGTCCAGCAGCTCGATGGCGAGCGACGGCAGCGGGATCGTGTGAGGCTTCCCGT 44263
|| |||||| || || || | || | || || | ||| ||||| || |
Sbjct 116265 TAATCGCGTCCAAGAGTTCAGCCGCAACATTGGGTACGGGAATAGCGTGTGGCTTGCCAT 116206
Query 44264 TCTTCGTCTTTGACCAGTCGAGCAGCCCTTCAGCCTTGTCGTAC---TGGTCCCGGTGCA 44320
|||| ||||| ||||| ||||| | || ||| |||| ||| | ||||| ||| |
Sbjct 116205 TCTTGGTCTTCGACCAATCGAGGATCCTTTC---CTTGGCGTCCCATTGGTCGACGTGTA 116149
Query 44321 GGGCGGCAATTTCCTCCACGCGCTGCCCGGTGAGCATCAGCAGGCGCA-TG---GCGTCA 44376
|| || || || || |||||||| || || | ||| | |||||| | || ||||
Sbjct 116148 GGCGCGCGATCTCGTCGACGCGCTGACCTGTCAACATGATCAGGCGAACTGCACGCGT-- 116091
Query 44377 AGGTACGGGCCATGGATGGGCCTGTCCGGGTTTCCCAGCCAGTCCCACATGCGGCAGTAG 44436
|||||| || | ||| |||||||| | ||||||| | | ||| | | |
Sbjct 116090 --GTACGGCGGGTGCACCGGCGTGTCCGGGCATTCCAGCCAACGATAGAGGCGACGGAAC 116033
Query 44437 TCCGCCTCACTGAGCCAGCGCGTGCCAACCACCTTAGGCTCGGTGGGGATCGAGGCCGCC 44496
||| | || |||||| || ||| || | |||||| || || || ||| ||
Sbjct 116032 TCCTCTTCGTCGAGCCATCGGTTGCTGGGAACATAAGGCTCAGTTGGAATGCTGGCGGCA 115973
Query 44497 GGGTTGTGAATGAGCTTGAACCGGCGCGGGCTGCTGGAGCGGTAGTCCAGCTCCGATTTC 44556
|| || || | || ||| || ||||| | || |||||||| | || || ||
Sbjct 115972 GGATTATGCACTAGACCGAAGCGCCGCGGCGTTGTGCTTCGGTAGTCGTGTTCTGACTTG 115913
Query 44557 AGCCCCCACGCGAAGGCCGCCCGGATGTAGGAGCGAACGTGGTCCGCCATGGAGTTTTTG 44616
|| ||||| ||| |||| |||||| || | |||||||| ||||| ||
Sbjct 115912 AGGCCCCAACTGAACGCCGACCGGATATATCCTCTGACGTGGTCGGCCATCGAACGGGCC 115853
Query 44617 CCGCGCTCGAAGATGGGCCGGAGCACGTTCAGCACGTCCTCTGGCTCGATGTCGCGGGCG 44676
|| || || | || || |||| || | | | || | ||| ||||||||| |||
Sbjct 115852 CCACGATCATATATCGGACGGATGACATCGACGATCTCGACCGGCGTGATGTCGCGCGCG 115793
Query 44677 AGGCGGTTCCGGCCGAGACCATCCGTGATTTTATCCAGCCCCTTCTTCG----CTTCCAC 44732
|||| | ||||| || || | || || | || ||||| | || ||||||
Sbjct 115792 GGGCGATGGCGGCCCAGCGTGTCAGCAATCTTGTTCAATCCCTTTTCCGTCTCCTTCCAA 115733
Query 44733 GAAGCTCATTTTCCCCTGAGCCTTCAGGTTATCAACGTAGGCGTCGAACAGGTCGCCAAC 44792
|| || |||||| | ||| |||| | ||||| ||||| ||||| | ||
Sbjct 115732 GATGCC----TTCCCCGATGACTTAAGGTGGCCCGTATAGGCCTCGAAGAGGTCAGCGAC 115677
Query 44793 GGTGCCCGGCCGGCTGTCACCGCCTGCCACCTTGATCGAGGCACCCTTGTTGATGGCCGT 44852
|||||| | || |||| ||| |||| ||||| | || |||| ||| || ||
Sbjct 115676 GGTGCCGGCGCGCGTGTC---GCCCACCACTTTGAT-GCTGCGTCCTTTTTGGATGCTGT 115621
Query 44853 -GGAGAAGTCGCGGCCGAACACCTCGCGGGCGCTCGC-CAGCGTCATGTGGGGGTAGTCG 44910
|| ||||| || || | ||||| | ||| |||| ||| | ||| || || |
Sbjct 115620 CGGCAAAGTCACGCTCGTAGACCTCCCTGGCT-TCGCGCAGAGACATCGACGGATAAGTG 115562
Query 44911 CCCATCTTCGAGAGGGTGCGCTTATTGTCGCGCCACTGCTGCGCGTACCACGTCGTC-GT 44969
|| ||||| | || ||| | ||||||||||| ||||| ||| ||| | ||
Sbjct 115561 CCGATCTTTCGCCGAGTACGCCTGCCATCGCGCCACTGTTGCGCCATCCA-ATCGGCGGT 115503
Query 44970 GACGCGGGTAGGCATGGGCTTGATGATGAGCACGAGGCGGCCGACGCCGCGCCCTTCACC 45029
|||||| || ||||| ||| | || |||| | | |||||| ||| ||||| || ||
Sbjct 115502 GACGCGAGTTGGCATCGGCCTAATCATGATGATCAACCGGCCGGTGCCACGCCCCTCTCC 115443
Query 45030 ATCGGCCAGTGTGGCCTGCTTCCGGCTCTTCTCAACCCGTTTGATAGCGTTCCGGATCTG 45089
||| ||||| | | || |||| || || ||||| |||| ||| |||| |
Sbjct 115442 ATCAGCCAGCGCGACCGCCTTCTGGGACTGTTCAACTTCCTTGAGCGCGCGACGGAGCGC 115383
Query 45090 TCCGTCTGTCAGCGCT-GGCATG 45111
|||||||| || ||| ||||||
Sbjct 115382 GCCGTCTGTGAG-GCTCGGCATG 115361
>seq11465
Length=2819
Score = 111 bits (122), Expect = 6e-20
Identities = 307/459 (67%), Gaps = 30/459 (7%)
Strand=Plus/Minus
Query 1440 ATGCACAGCCGCAACATCATCCTGAAGGCCCGCCAGCTCGGCTTTACGACGTTCCTATGT 1499
||||||| || || | ||||| || || ||||||| |||||| || || ||| |
Sbjct 2727 ATGCACAACCAGAATGTGATCCTCAAAGCGCGCCAGCGCGGCTTCACCACCTTCATCCAG 2668
Query 1500 ATCTTCTTCCTCGACTGCACCCTGTTCCGGCCGAACGTGCGCGCCGGCATCATCGCCCAC 1559
| ||| | |||||| | | | ||| |||| ||||| ||||||||||
Sbjct 2667 CTGTTCATGCTCGACGCCTGCGTCTTC------AACG------CCGGCTCCATCGCCCAC 2620
Query 1560 GAAGAGGACGCG-GCGAAGGCCATCTTCCGAGACAAGGTGAAGTTCGCCTACCTCAACCT 1618
| | | || ||| ||| |||||||| ||||||||| || |||| ||||||
Sbjct 2619 -ACGCTGTCGGACGCGCAGGTGATCTTCCGCGACAAGGTGCGTTTTCCCTATGACAACCT 2561
Query 1619 GCCGGCTCACCTGCGCGA-GGTGATGCCCCTGAAGCGTGA-CG-CAGCTGAAG--AGCTT 1673
||| | | | | || |||| | ||| | ||||| || || | || || |
Sbjct 2560 GCCCGACGGCAT-CAAGACGGTGGTCCCCAT----CGTGAACGACAACGCCAGTGAGTTG 2506
Query 1674 CTGTTCGCCCACAACAACAGCTCGATCCGCGTCTCCACGTCGATGCGTTCGGGCACCATG 1733
||| ||| | ||||| | || ||||||||||| || ||| |||| || ||||| ||
Sbjct 2505 CTGCTCGGCAACAACTCCGGC---ATCCGCGTCTCGACCTCGCTGCGCTCCGGCACGCTG 2449
Query 1734 CAGTACCTGCACATTTCCGAGTTCGGGAAGATATGCGCCAAGCGTCCGGACAGGGCCGAA 1793
|||||||||||| | ||||| | ||| ||||| |||||||| |||||||| |||
Sbjct 2448 CAGTACCTGCACGTCTCCGAATACGGCAAGATCTGCGCCAAATATCCGGACAAGGCGCGC 2389
Query 1794 GAGGTTGTCCGAGGCTCTATCCCTACCGTTCCCACCCGAGGCGGGATGCTCTTCATTGAG 1853
||||| | ||| | || ||||| || || | | || | ||||| |||
Sbjct 2388 GAGGTGCGCTCCGGCGCGCTCAACACCGT--GGACAAGA-ACCAGCTGGTGTTCATCGAG 2332
Query 1854 AGCACGGCAGAAGGCCGGGACGGTCACTTCTACAAGATG 1892
|||||||| || |||| |||||| ||||||| | || ||
Sbjct 2331 AGCACGGCGGAGGGCCAGGACGGCCACTTCTTCGAGCTG 2293
>seq10635
Length=172665
Score = 104 bits (114), Expect = 9e-18
Identities = 176/252 (70%), Gaps = 10/252 (4%)
Strand=Plus/Plus
Query 36020 AGCTCATCGACCGGGGCATCCCAGAGGCCGAGATCGCCTTCATCCACGACGCGAACACCG 36079
|||| ||| | |||| | || | | |||||||||||||||| || ||| || |
Sbjct 171932 AGCTGATCCGCATGGGCGTGCCGGCGTCCGAGATCGCCTTCATGCAGGACTACAAGA--- 171988
Query 36080 AGCTTCAGA----AAGAAGAGC-TGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCT 36134
|| || || ||| || || |||||||| | || ||| ||||| || ||| ||||
Sbjct 171989 AG--TCGGAGGCGAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTCCT 172046
Query 36135 GTTCGGCTCCACGGCTAAGATGGGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCT 36194
| |||||||| | | || |||||| ||||| | |||| ||| | | ||| ||| ||
Sbjct 172047 GATCGGCTCCTCCGATACGATGGGCACCGGCGTCAACGCGCAGCTCCGCCTGAAGGCGCT 172106
Query 36195 CCACCACCTCGACGCACCATGGCGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCAT 36254
|| |||||||||| || |||| ||| || | ||| ||||||||||| || |||
Sbjct 172107 GCATCACCTCGACGTGCCCTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGATCGA 172166
Query 36255 CCGTCAGGGTAA 36266
|| ||||| ||
Sbjct 172167 GCGCCAGGGCAA 172178
>seq1205
Length=48877
Score = 102 bits (112), Expect = 3e-17
Identities = 172/246 (70%), Gaps = 6/246 (2%)
Strand=Plus/Plus
Query 516 CCGACGAACGACGGCGGCTATGGCTTCAACCCTAAGCGCGAGCCTCATCCCGAGTGCCCG 575
||||| |||| |||||||||||||||| | ||| || || || || || ||||||
Sbjct 35337 CCGACCGACGATGGCGGCTATGGCTTCAGCAAGAAGGCTGATCCGCACCCTGACTGCCCG 35396
Query 576 AACTGCGACGGTGACGGCTATGGCCACATGCACGTCGAGGACACGCGCTTCCTCTCCGGA 635
| |||| ||| || || | | | || || | | ||||||||| || ||
Sbjct 35397 ATGTGCGGCGGCGAAGGGTGCGAGGATGTGTTCGCCCACGACACGCGCCAACTGCTGGGC 35456
Query 636 CCTGCGCGGATGCTCTATGCCGGCATGGAAATGACGAAGGAGGGCATCAAGCCCAAGATG 695
| ||||| |||||||||||||| || | || |||||||| ||| | || |||||||
Sbjct 35457 GCCGCGCGCCTGCTCTATGCCGGCGTGAAGATCACGAAGGATGGCCTTGAGATCAAGATG 35516
Query 696 CACGACCAG---ATGGCCGCTGCGCAGATGGTGGCCCGTCACCTCGGCATGTTCAACGAT 752
| || ||| | || |||| | ||| || ||||| ||||| ||||||||||| ||
Sbjct 35517 AAGGATCAGGACAAGG-CGCT--GGAGAATGTCGCCCGGCACCTGGGCATGTTCAAGGAC 35573
Query 753 AAGCTC 758
||| ||
Sbjct 35574 AAGGTC 35579
Score = 96.9 bits (106), Expect = 1e-15
Identities = 194/282 (69%), Gaps = 18/282 (6%)
Strand=Plus/Plus
Query 52183 GCGCTGGGCCGGCTGAAGCAGGGCGAGAAGAACAACACCGAACAGGCCTACGAGGACCAT 52242
||||||||||| || ||| ||||||||||||||| | || ||| || ||||||| |
Sbjct 32983 GCGCTGGGCCGCCTCAAGACGGGCGAGAAGAACAAGTCGGAGCAGCGCTTCGAGGACGAG 33042
Query 52243 CTGGAGTGGC---GAAAGCACGTCGGGGAAATCCTCTGGTACAAGTTCGAGGGCGTGAAG 52299
| | | | | | || | ||||| |||||||||||| ||||||||| | |||
Sbjct 33043 GTCCTGCGCCCCGGCATGCTGGCAGGGGATATCCTCTGGTACCGTTTCGAGGGCATCAAG 33102
Query 52300 CTCCGTCTGGCTGACAACACCTTCTACACCTGCGACTATTTC---GTCATGCTCGCGAAC 52356
|| || ||||| || ||||||||| || || | ||||| |||||| ||| |||
Sbjct 33103 CTGCGCCTGGCCGATAACACCTTCCTGAC---CGTCGATTTCGCGGTCATGGGCGCCAAC 33159
Query 52357 GGC--CAGCTGGA-GGCCCACG---AGGTGA---AAGGCTTCTGGACCGACGATGCCCGC 52407
|| || | || | | ||| ||| | ||| | || || || || |||
Sbjct 33160 AGCATCATCACGATGATCGACGTCAAGGGCAGCGAAGCCGTCATCCAGGAAGACGCGCGC 33219
Query 52408 GTGAAAATCAAGGTCGCGGCCGATCTCTATCCGTTCCGCTTC 52449
||||| || |||||||| ||||| |||||| |||||||||
Sbjct 33220 GTGAAGATGAAGGTCGCCGCCGAAGCCTATCCCTTCCGCTTC 33261
>seq9481
Length=228138
Score = 91.5 bits (100), Expect = 6e-14
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 36097 CTGTTCGGCAAGGTCCGCACCGGCCGCGTCCGCGTCCTGTTCGGCTCCACGGCTAAGATG 36156
||||||||| | |||||| ||||| || || | || |||| ||| ||| | |||
Sbjct 6640 CTGTTCGGCGATGTCCGCGCCGGCAAGGTGCGTTTTCTCATCGGTTCCTCGGAAACCATG 6581
Query 36157 GGTGCCGGCATGAACGTGCAAAACAGGCTGGTGGCTCTCCACCACCTCGACGCACCATGG 36216
|| ||||| | || | |||| || || ||| |||||||| ||||||| ||||||
Sbjct 6580 GGCACCGGCGTCAATGCGCAACTTCGGTTGAAGGCGCTCCACCATCTCGACGTGCCATGG 6521
Query 36217 CGCCCGTCTGACCTCGAACAGCGCGAGGGCCGCATCATCCGTCAGGGTAACGAGC 36271
| ||||| | |||| |||||||||||| | ||| | || || || ||| |||
Sbjct 6520 CTGCCGTCGCAGATCGAGCAGCGCGAGGGCAGGATCGTTCGCCAAGGCAACCAGC 6466
>seq823
Length=9660
Score = 86.0 bits (94), Expect = 2e-12
Identities = 99/131 (76%), Gaps = 2/131 (2%)
Strand=Plus/Minus
Query 30316 GTACCGCGCGAGCAGATGCCGCAGATTAAGACCGAGCACCGGGGCGCGCTGGTGAACTTC 30375
|| ||||||| | ||||||||||||| |||||||||| ||||| |||| ||||||
Sbjct 9594 GTGCCGCGCGCGGAGATGCCGCAGATCCGAGCCGAGCACCGCGGCGCCATGGTCAACTTC 9535
Query 30376 CTGAATGCTCGAGGCATCGAGCACGAGGAAAAGACCGT-CAACCCTGACACCCTGAAGCC 30434
||||||| || ||||| | ||| |||| ||| ||| || ||| || || |||||
Sbjct 9534 ATGAATGCCCGCGGCATTGCTCACCAGGAGGAGAGCGTGCAGGCCT-CCAGTCTCAAGCC 9476
Query 30435 GACGCAGGCGG 30445
|| |||||||
Sbjct 9475 CACCCAGGCGG 9465
>seq9795
Length=220374
Score = 82.4 bits (90), Expect = 3e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 9004 CAGAAGGCGGCCGCAGCTGCTGAAGGCAAGAACAACCCGATCTTTAAGGGCGGGCTGGGC 9063
|| || || || ||||| || |||||| |||||||| ||||||| || || |||||
Sbjct 176667 CAAAAAGCAGCAGCAGCGGCAGAAGGCCGTAACAACCCACTCTTTAAAGGTGGTTTGGGC 176608
Query 9064 ATGATTAACAACGCCGTGCTGCACTCGCACGAGTCCGTCATCCGTATGAACGACTACGGT 9123
||| ||||||| | | |||||||| || | ||| ||| | ||||||||||
Sbjct 176607 ATGTACAACAACGTCATCCTGCACTCACATCAAAGCGTGATCAACTTTGCCGACTACGGT 176548
Query 9124 GCCGGCCAGAACGTGCAGGCAGCTCGCGCGCTGTTCCTCGGCCGTCAGGCAGCTGTCATC 9183
||||| ||| | ||| | || || ||||| | || ||||| |||| ||| ||
Sbjct 176547 GCCGGTGCCAACTTAACGGCTGGCCGTGCCTTGTTCTTAGGTCGTCAAGCAGGTGTGATT 176488
Query 9184 GCCTACGG 9191
||||| ||
Sbjct 176487 GCCTATGG 176480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194128478644408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |