Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_018279.1
Length=49116
Score E
Sequences producing significant alignments: (Bits) Value
seq2893 86.0 2e-12
>seq2893
Length=1360
Score = 86.0 bits (94), Expect = 2e-12
Identities = 103/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 47560 TTCGGAAGGGTGGAATTTGAAATGCGACCCTTTCAAACCGATGGAGGCATGCAGAAGCAG 47619
||||||||||| | || |||| || ||||||| |||| | || |||| ||| |||
Sbjct 938 TTCGGAAGGGTCGCGTTCGAAACGCAACCCTTTGAAACAGCCGGCGGCAAGCAACAGCGT 879
Query 47620 GAAATAGCACTGCTAAACGAACAGCAAACCACGCTGTTGATCACCTACATGCGAAACAAT 47679
||| | || ||||| || || ||||| || | || ||||| |||||||||| ||||
Sbjct 878 GAAGTTGCCCTGCTCAATGAGCAGCAGTCCGCCCTTGTGATCGCCTACATGCGCAACAGC 819
Query 47680 GAAGTTGTGCGTGAATTCAA 47699
||| | ||||| | |||||
Sbjct 818 GAAATCGTGCGCCAGTTCAA 799
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 157021515507124
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |