Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_018452.1
Length=61847
Score E
Sequences producing significant alignments: (Bits) Value
seq9587 461 3e-125
seq10635 315 3e-81
seq2892 95.1 5e-15
seq10271 93.3 2e-14
seq13842 91.5 6e-14
seq9481 87.8 7e-13
seq13715 84.2 9e-12
seq11045 82.4 3e-11
seq8237 82.4 3e-11
>seq9587
Length=50143
Score = 461 bits (510), Expect = 3e-125
Identities = 821/1176 (70%), Gaps = 54/1176 (5%)
Strand=Plus/Minus
Query 24136 TGCCCTTCCGGCCGAACCGCGCGCAGCGCCGGCTCCTGCGCCGCCTCTGGCACCGCAACG 24195
||||||||||||| || ||||||||| || || | |||| |||||||||||||||
Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357
Query 24196 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACGCTCATCTGCATCATCTGGCTCGACC 24255
||||||||||||| || ||||| ||||| ||||| || ||| |||| | ||||| ||||
Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297
Query 24256 ACGCGCTGTTCAACGCCAA-CAGCCGGTGCGGCATCATCGCGCAGGACCGCGAGACGGCC 24314
| ||||||||||| || | |||| | ||||||||||||||||| || ||||| | |||
Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238
Query 24315 GAGGCGATCTTTCGCGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGNNN 24374
||||| ||||| || ||||||||||||| ||||||||| ||||||||||||| | |
Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGAT---- 14182
Query 24375 NNNNNNATGCCGCT--CGCCAACTGCACGA-AGTCT----GAGATGTTGTTCGGCCACAN 24427
| ||||| | || || ||| ||| ||| || |||||| |||||
Sbjct 14181 ---TCGAGACCGCTTCCCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAA 14125
Query 24428 NNNNNNNNNNNTCCGCGTCGCGACGTCCGTGCGCGGCGGCACGATCCACCGCCTGCACAT 24487
| ||||| || |||||| |||| ||||||||||| || || ||| |
Sbjct 14124 CAACAGCAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGT 14065
Query 24488 CTCCGAGTTCGGAAAGATCTGTGCGAAGTACCCGGACAAGGCCAAGGAGGTCGTGACCGG 24547
|||||| | || ||||||| || | |||| | |||||||||||||| |||||||
Sbjct 14064 CTCCGAACTGGGCAAGATCTCGGCACGCTTCCCGCATAAGGCCAAGGAGGTGATGACCGG 14005
Query 24548 CTCCATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCG 24607
|||||| ||||||||||| | | ||||| ||||| |||||| ||||||||||||
Sbjct 14004 CTCCATTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGC 13945
Query 24608 CGAGGGCGAGTTCTACGAGATCACGAAGCGGGCCGAGGC---GCTCGACCAGCAGAAGGA 24664
| | |||||||||||| | | | ||||||||||||| || | || ||| ||| |
Sbjct 13944 CAACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGCCCTGCACTACACGCACAAGAA 13885
Query 24665 CCGGCCGCTGTCGCCGCGCGACTACCGGTTCCACTTTTATCCGTGGTTCGAGGAGCCGAA 24724
|||| ||||||||||| || |||||||| || |||||| ||||||| ||
Sbjct 13884 ------GCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAA 13831
Query 24725 CTACCGCATGGACCCCGCCGGCGTC---GTCGTGACCGAGAAGGACGCCGAGTATTTCAC 24781
||||||||||||| | | | ||| |||| | |||| || | ||| ||||||
Sbjct 13830 CTACCGCATGGACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCA---CGACTATTTCGA 13774
Query 24782 GCAGGTCGAGG-CGCGCATGGGCGTG-ACGCTCGATGCCGAGCAGCGTGCTTGGTACGTC 24839
|||||||||| || | || | ||| || ||||| || ||||| || ||||| ||
Sbjct 13773 CCAGGTCGAGGTCGAG-AT-GCAGTGCACCATCGATCTGGAACAGCGGGCCTGGTATGTG 13716
Query 24840 GCCACGCGCGACGCAGACTTTTCCGGCAGCG-AGGAGCGTATGTGGCAGGAATACCCGTC 24898
||||| | || || ||||| |||| ||| ||||| ||||||||||| ||||| ||
Sbjct 13715 GCCACCCAGGAGGCTGACTTCCCCGG-TGCGCCTGAGCGCATGTGGCAGGAGTACCCCTC 13657
Query 24899 CACCCCTGAAGAACCGTTCATGGTGTCGACCGAGGGCACCTACTACGCGCAGCAGCTCGC 24958
||| || | || | ||| | ||| | || |||| |||||||| || | |
Sbjct 13656 CACGCCGGCCGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAGGCCATGGT 13597
Query 24959 CGCG-GCGCGCAAGCAAGGCCGCATCAAGCCGTCCCTGCCCGTGCTGTTCAACGTGCCGT 25017
||| | || |||| ||| |||||| | || |||||| |||| | |||||
Sbjct 13596 TGCGCTCACG-AAGCGCGGCGGCATCA---CCTCGGTGCCCGAGCTG---GATCTGCCGG 13544
Query 25018 GCTTCACGTTCTGGGACATCGGCAACAGCGACGGCACGGCGATCTGGGTGTTCCAG-CGC 25076
|| ||| |||||||| ||||| | ||||| ||||| |||||| | | ||| | |
Sbjct 13543 TCTACACATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCC 13484
Query 25077 ATCGAGCACGAGTGGCGCTGCATCCGATTCAAGGAGG-GCTGGGGCGAGCCGTACAGCTT 25135
|| | |||| |||| |||| | | | |||| || | | || | | | ||
Sbjct 13483 TGCGCG-GCGAGGACCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-A 13426
Query 25136 CTACGTGAAGTGGCTCCAGGAGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGA 25195
||||||| || |||| |||||| ||||| | | | ||||||||||| ||
Sbjct 13425 CTACGTGCGCCACCTGCAGGGCCTCGGCTACGTGTTCGGCGGGCACTTCCTGCCGCATGA 13366
Query 25196 CGCCGACCACGTGCGTCAGGGTCAGACGACCAACAAGAGCC-CGAAGCAGATGCTCGAGG 25254
||| | ||| ||| | | | | |||||| || || | |||||| ||| |||
Sbjct 13365 CGCGAATCACAAGCGCCTGAGCGA---TACCAAC-CGATCCACAAAGCAGCAGCTGCAGG 13310
Query 25255 AGCTGATGCCGGGCGTGCGCTTCGAGGTCGTGCCGC 25290
||||||||||||| |||||| | ||| || ||||
Sbjct 13309 CGCTGATGCCGGGCCAGCGCTTTGTGGTGGTTCCGC 13274
>seq10635
Length=172665
Score = 315 bits (348), Expect = 3e-81
Identities = 1351/2087 (65%), Gaps = 118/2087 (6%)
Strand=Plus/Plus
Query 53021 CTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTT 53080
|||||| ||||| ||| | | ||| |||| ||||| | || || || |||
Sbjct 170426 CTGGATCTGGACCGACCCCGATCGCACCGATCGGCTGGGGCGGGTGTATAAAGACCCCTT 170485
Query 53081 C-AACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTATCGC 53139
| |||||||||| ||||||| |||||||||||||| |||| ||||||||||| ||| |
Sbjct 170486 CTAACAACATCGTGCCGCGCGCCTTCGACGGCTCGCATCTGAAGCTGCCGGGCGCATC-C 170544
Query 53140 TGCG-CTTCGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGC 53198
||| ||||| || ||| |||||||||||| |||||||||| ||| | |||
Sbjct 170545 GGCGCCTTCGTGCTCTACGATCACCAGAAGCGCGGCATCTGGCGCATCATCGCCGCGGGC 170604
Query 53199 GATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGGC 53258
| | |||||||| ||||| |||||||| ||||| || | |||||| || | |
Sbjct 170605 GCGACCTACCTCGCCCACGCCGTCGGCGCCGGCAAAACCATGACGATGGCGGCCGCCATC 170664
Query 53259 ATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATG 53318
|||||| |||| ||||| |||||| | |||| ||||| | |||||| ||
Sbjct 170665 ATGGAGCAGCGCCGGCTTGGCCTGATCGCCAAGGCGATGCTTGTGGTGCCCGGTCATTGC 170724
Query 53319 CTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCG 53378
|| ||||| ||||||||| || || | ||| || ||| ||| |||| | |||||
Sbjct 170725 CTGGCGCAGGCCGCGCGCGAATTTCTGGCGCTCTATCCGAACGCCCGCATCCTCGTCGCC 170784
Query 53379 GACGAGCAGAATTTCCACACCCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAAC 53438
|||||| || ||| || |||| || | || ||| | ||| ||| ||| |
Sbjct 170785 GACGAGACCAACTTCAGCAAGGACAAGCGGCAGCGCTTCTTATCGCGGGCGGCGACCGCG 170844
Query 53439 AACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATGTCCGACGAG 53498
| | ||||||||||||||||||||||||||| ||| || ||||||| || |||
Sbjct 170845 ACCTGGGACGCGATCATCATCACGCACTCGGCCTTCCGCTTCATCGGCGTG-CCG----- 170898
Query 53499 TACGCCTCGGCGTTC-ATCCGCGACCAGATC---GACGAG-TGGAAAGCCGCGCTCGACG 53553
||||| ||| | | || | |||| |||||| |||| |||| |||
Sbjct 170899 ------TCGGCTTTCGAGCAGC-AGATGATCCAGGACGAGCTGGA-------GCTCTACG 170944
Query 53554 AGACG-----GA-CAAGG------GCGAC---CGCATCACGCGCAAGCAGATCGAGCGCC 53598
||||| || ||||| ||||| ||| || ||||||||| |||| || |
Sbjct 170945 AGACGCTGTTGACCAAGGTCGAAAGCGACGATCGCGTCTCGCGCAAGCGCCTCGAACGGC 171004
Query 53599 GCATCGNNNNNNNNNNNNNNNNGCTGGAGGCGAAACAGGGCGGCGAGAAGAAGGACAAGG 53658
| | |||||| | | || | | ||||| |
Sbjct 171005 TGAAGGAGGGTCTGAAAGAGCGCCTGGAGTC------GCTCGCCACGCGCAAGGATGATC 171058
Query 53659 TGCTGTCGTTCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCC 53718
| || | || |||| | |||||||||| | ||||||||||| || || ||||
Sbjct 171059 TCCTCACCATCTCGGAGATCGGCGTCGACCAGATCATCGTCGACGAGGCGCAGGAATTCC 171118
Query 53719 GAAAACTCGACTTCGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCGGGCTCGC 53778
| || || |||||| ||| | | | | |||||| |||| || |||||||
Sbjct 171119 GCAAGCTGTCCTTCGCCACGAATATGTCGACGCTGAAGGGCGTCGATCCCAACGGCTCGC 171178
Query 53779 AGCGCGCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGC-AAGAAGCCGGGCCGC 53837
|||| || |||||| | ||||| || || | | || | | ||||| || ||||||
Sbjct 171179 AGCGTGCCTGGGACCTCTATGTGAAGTCCCGATTCAT-CGAAACGAAGAATCCCGGCCGC 171237
Query 53838 GCGCTCGTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCA 53897
||||||||| ||||| ||||||||| |||| |||||| | |||||| | || | |
Sbjct 171238 GCGCTCGTGCTGGCGTCTGGCACGCCGATCACCAACACGCTCGGCGAGATGTATTCGGTG 171297
Query 53898 CAACGCT-TCTTCCAGC-CCGAGCAGCTTGCCGAGGATGGTCTGGATACGTTCGACGCGT 53955
|| |||| ||| | || || || |||| || || | ||||||||| |
Sbjct 171298 CAGCGCTATCT--CGGCTACGCCGCCCTCCGCGAGCGGGGCTTGCACGAGTTCGACGCCT 171355
Query 53956 GGGC--CAACCAATACGGTGACATCGTTG--CGGGCTTCGAGCAGAACGCCGCCGGCGGC 54011
|||| ||||| | ||| ||| || | | || || |||||| | || ||||| |
Sbjct 171356 GGGCCTCAACC--TTCGGCGACGTC-TCGACCGAGC-TCGAGCTTCAGCCCTCCGGCAGA 171411
Query 54012 TACGAGGTCGTGAGCCGGTTCGCGAAGTTCCAGAACGTGCCCGAGCTGATGCGCCGCG-T 54070
||| || || | || ||||||| ||| || || ||||||||||| |||| | |
Sbjct 171412 TACAAGCCGGTCACGCGCTTCGCGACCTTCGTCAATGTCCCCGAGCTGAT-CGCCATGTT 171470
Query 54071 GCGCTCGTTCATGGACATCCTGACGAGCCAGCAGCTCTCGCAG-TACGTGGATCGTCCGG 54129
|| || ||| ||| | | | | || | || ||| | |||||| | |||||
Sbjct 171471 CCGGTCCTTCGCCGACGTGGTCATGGCGGAGGACCT-GCGCCGATACGTGAAGATTCCGG 171529
Query 54130 CGATCGAGGGCGGCGGCCGTCAGATCATGGTCACGCCGGAGC---CGTTCGGATACAAGG 54186
||||| | |||| || ||||||||| ||| || ||| || || | ||||
Sbjct 171530 CGATCTCGACCGGCAAGCGCCAGATCATG---ACGGCGAAGCCGACGGCCGCCTTCAAGC 171586
Query 54187 CGTACCAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGGCCGCCGC 54246
|||||| |||||| |||||||| |||||| | ||| | | ||||||
Sbjct 171587 GTTACCAGGTCCAGCTCGATGCGCGCATCAAGGCGATCGAGATGCGCGACCGTCCGCCGG 171646
Query 54247 AGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATCGACA 54306
|| || | |||||| | || ||| ||| | |||||||| |||||||||||
Sbjct 171647 AGCCAGGCGACGACATCCTGCTCTCCGTCATCACCGACGGCCGCCATGCCGCGATCGACC 171706
Query 54307 TGCGCTTCGTCGA-CCCGACCGCGCCGAGCGACCCGAGCAGCAAGCTGAACCAGATGATC 54365
| ||| | ||||| || ||| | ||| ||| || || ||||||||||| |||||||
Sbjct 171707 TTCGCCTTGTCGATCCGGACAATGACGA-CGAGGCGGACAACAAGCTGAACCTGATGATC 171765
Query 54366 GACGCCGTGATCGCCGACTACCATGCGG----CGTCCGACTTCGAGTATTCG---ACGAA 54418
| || || ||| | | | |||| || ||||| || ||| | | |
Sbjct 171766 G--GCAATG--CGCTGCGCATCTGGCGGGAAACGGCCGACAACGCCTATGTGCGTGCCGA 171821
Query 54419 CGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACATCGGGCTCGG 54478
||||||| | | | | ||||| |||| || ||||| |||| ||||| |
Sbjct 171822 CGGCAAGCCCTATGAGCTGCCCGGCGCCGCGCAGATGATCTTCTCCGATCTCGGGACC-- 171879
Query 54479 CGAGCAGTCGGCGAAGAACCGCGG--TTTCGACATGAAGGCGTGGATC-GAGAAGCGTCT 54535
| || || ||||| |||||| | ||| | | | || |||||| | || | | ||
Sbjct 171880 ATTTCCGT-GGAGAAGAGCCGCGGCTTCTCGGCCT-ATCGC-TGGATCAGGGACGAG-CT 171935
Query 54536 GGTCGACGGCGGCATCCCGCGCGAGC-AGATCGCGTTCATGCGCGACAACAAGGAGCATG 54594
| || | ||| | ||| ||| | ||||||| ||||||| ||| ||||| || |
Sbjct 171936 GATCCGCATGGGCGTGCCG-GCGTCCGAGATCGCCTTCATGCAGGACTACAAGAAGTCGG 171994
Query 54595 CCAAGAAAGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCG 54654
||| |||||||||||| ||| |||||| ||||| ||| | |||||||||
Sbjct 171995 AGGCGAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTCCTGATCGGCT 172054
Query 54655 GCAAGGA---CATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATC 54711
| || |||| ||||||||||||| |||| ||||| | | | | || |
Sbjct 172055 CCTCCGATACGATGGGCACCGGCGTCAACGCGCAGCTCCGCCTGAAGGCGCTGCATCACC 172114
Query 54712 TGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGG 54771
| |||| ||| ||| |||| | ||| ||||||||||| || ||| || ||||
Sbjct 172115 TCGACGTGCCCTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGATCGAGCGCCAGG 172174
Query 54772 GCAACCAGAACAAGCAGGTGCGCATCCGCGCCTGGGCGA-CGAAGGGCAGCTACGACTCC 54830
|||| ||| || | | | || ||||| |||| |||||| || |||| ||
Sbjct 172175 GCAATCAGCACGACGTCATCGACGTCTTCGCCTATGCGACCGAAGGCTCACT-CGACGCC 172233
Query 54831 ACCATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCTCAACGGCGAC 54890
|| |||||| || || | |||||||| || ||||||| ||||| ||||||
Sbjct 172234 ACGATGTGGCAGAACAATGAGCGCAAGGCACGCTTCATCGCGGCCGCGCTTTCGGGCGAC 172293
Query 54891 GACAGCG-TGCGCTCGCTCGAGGACGT-GTCCGAGGCATCGGCA-----TTCGACATGGC 54943
|| || | ||| || |||||| | | | |||| | || |||| |||||
Sbjct 172294 -ACCTCGATCCGCCGTCTGGAGGACCTCGGCGAAGGCCAGGCCAACCAGTTCGCGATGGC 172352
Query 54944 CGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCT----GGCGGGCCTGAAGGCCG 54999
||| | || ||||||||| |||| ||| ||| | ||||| ||| ||||
Sbjct 172353 GAAGGCGATCGCATCGGGCGACCAGCG---TCTGATGCTCAAAGCCGGGCTCGAA-GCCG 172408
Query 55000 ACGTCGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAG 55046
|| ||| |||||| || || || || |||||| |||||| |||
Sbjct 172409 ACATCGCGCGGCTCGAACGGCTCCGCGCCGCGCATATCGACGATCAG 172455
Score = 82.4 bits (90), Expect = 3e-11
Identities = 195/286 (68%), Gaps = 13/286 (5%)
Strand=Plus/Plus
Query 52513 AGGAGGTCATCGACGCGCTCGGCACCGCGATCTACGAGGACCCGGCGAAGGGCT---GGC 52569
|||| || |||| || |||||||| ||| |||| | || ||| || | |||| |||
Sbjct 169892 AGGACGTGATCGCCGAGCTCGGCAGCGCCATCTTCCGCGATCCGTCGGACGGCTCCTGGC 169951
Query 52570 AGACGTCCGACGCGTACCTGTCGGGTAACGTCGTGCGCAAA-CTCGCCGAGGCGCAGGCC 52628
||| ||||||| || || || || ||| || |||| |||| || ||| |||||
Sbjct 169952 AGAGCGCCGACGCCTATCTCTCCGGCGCGGTCC-GCTCAAAGCTCGTCGCGGCCGAGGCC 170010
Query 52629 GCGGC-GCGCAGCGACCGCAAGTACCAGCGCAACGTCGAGGCACTGCTGGCCGTGCAGCC 52687
|||| || | ||| | ||| ||||||| |||| ||| |||| | ||||||||
Sbjct 170011 GCGGTAGCTCT-CGATCCAGCCTACGAGCGCAATGTCGCGGCGCTGCGCGATGTGCAGCC 170069
Query 52688 GAAGCCGCTC---GGCCCGAGCGACATCACGGTGAAGCTGGGCCAGAACTGGATTCCGGC 52744
|||| || ||||| | |||||||||| | ||| ||| | |||||||||||
Sbjct 170070 C--GCCGATCTCAGGCCCTCG-GACATCACGGCGCGGCTCGGCGCGCCGTGGATTCCGGC 170126
Query 52745 GGCCGACGTCGCCGTGTTCGCGAGCGAGGCGCTGAACGAGAACATC 52790
| |||| || || |||| | ||| || || || | |||||
Sbjct 170127 CGACGACATCATCGCCTTCGTCAAGGAGACGATGGGCGCGGACATC 170172
>seq2892
Length=791
Score = 95.1 bits (104), Expect = 5e-15
Identities = 84/105 (80%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 31033 AACAACCCGATCTTCAAGGGCGGCCTCGGCATGATCAACAACGTCGTGCTGCACAAGCAC 31092
|| ||||||||||||| ||||| | ||| | |||| ||||| | ||||||||||||
Sbjct 436 AAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTGCACAAGCAC 377
Query 31093 CGCAACGTGATCCGCTTCAACGATTACGGCGCGGGCGCCAACGTC 31137
||||||||||| |||||| ||| ||||| || ||||| ||| ||
Sbjct 376 CGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332
>seq10271
Length=310985
Score = 93.3 bits (102), Expect = 2e-14
Identities = 78/96 (81%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321
|||| |||||||||||||| |||||| || | | ||||| || ||||| ||| || |||
Sbjct 222560 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 222619
Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTT 8357
||||| ||||||||| |||| |||||||| || ||
Sbjct 222620 TCGTGGGTTCGAATCCCACCCTCTCCGCCATTTGTT 222655
>seq13842
Length=4973
Score = 91.5 bits (100), Expect = 6e-14
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321
|||| |||||||||||||| |||||| || | | ||||| || ||||| ||| || |||
Sbjct 407 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 348
Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCA 8351
||||| ||||||||| |||| ||||||||
Sbjct 347 TCGTGGGTTCGAATCCCACCCTCTCCGCCA 318
>seq9481
Length=228138
Score = 87.8 bits (96), Expect = 7e-13
Identities = 213/318 (67%), Gaps = 11/318 (3%)
Strand=Plus/Minus
Query 54560 GCAGATCGCGTTCATGCGCGACAACAAGGAGC---ATGCCAAGAAAGAGCGCCTGTTCGC 54616
||||||||| ||||||| || |||| | | |||||| | ||| |||||||
Sbjct 6689 GCAGATCGCATTCATGCAGGATTACAAAAAAACCGAGGCCAAGCA---GCGTCTGTTCGG 6633
Query 54617 GGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATGGAAACCGG 54673
|| | |||| ||||| ||| | || ||||| | ||| ||||| |||||
Sbjct 6632 CGATGTCCGCGCCGGCAAGGTGCGTTTTCTCATCGGTTCCTCGGAAACCATGGGCACCGG 6573
Query 54674 CGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGC 54733
|||||| | ||| || | | | | ||||| |||| ||| ||| | ||| |
Sbjct 6572 CGTCAATGCGCAACTTCGGTTGAAGGCGCTCCACCATCTCGACGTGCCATGGCTGCCGTC 6513
Query 54734 ATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCG 54793
||||||||||||||||| | ||| | || || ||||||||| | || ||||
Sbjct 6512 GCAGATCGAGCAGCGCGAGGGCAGGATCGTTCGCCAAGGCAACCAGCATGAGGAGGTCGA 6453
Query 54794 CATCCGCGCCTGGGCGACGAAGGGCA-GCTACGACTCCACCATGTGGGGGATGAACGCCC 54852
||| ||||| || ||| | ||| ||| ||| || |||||||| || |||| |
Sbjct 6452 TATCTACGCCTATGCCACGGAAGGCTCGCTG-GACGCCTCCATGTGGCAGAGCAACGAGC 6394
Query 54853 GCAAGGCGCGGTTCATCG 54870
|||||||||| |||||||
Sbjct 6393 GCAAGGCGCGATTCATCG 6376
>seq13715
Length=7744
Score = 84.2 bits (92), Expect = 9e-12
Identities = 118/159 (74%), Gaps = 10/159 (6%)
Strand=Plus/Plus
Query 49044 GGCACGCTCGGCATTCCGCGCGATCAGATGCCGCAGGTGCCGACGCA----ATCGCACGG 49099
|| || || ||| | ||||||| ||||||||||||| | ||| ||| ||||| ||
Sbjct 926 GGTACCCTGGGCGTGCCGCGCGCTCAGATGCCGCAGAT-CCG-CGCTGAGCATCGC--GG 981
Query 49100 CGGGCTCGTCAATCACCTGAACGCGCAGGGCATCGAGCACGAAACGA-AGATGGTGCCGG 49158
| || |||||| |||||| |||| ||||||||| | | || ||| | |||| |
Sbjct 982 TGCCCTGGTCAATTTCCTGAAGGCGCGGGGCATCGACAGCAAGGCGGCAGA-GATGCCAG 1040
Query 49159 CGGCCGACCTGAAGCCGACGCAGGCCGAGTTCTCGCCCG 49197
| | |||||| || ||||||||||| || ||||||||||
Sbjct 1041 CTGGCGACCTAAAACCGACGCAGGCGGAATTCTCGCCCG 1079
>seq11045
Length=10013
Score = 82.4 bits (90), Expect = 3e-11
Identities = 74/93 (80%), Gaps = 0/93 (0%)
Strand=Plus/Plus
Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321
|||| ||||||||||||| |||||| || | | ||||| || |||| |||| ||| ||
Sbjct 21 GGAGAGGTGGCAGAGTGGTTGAATGCACCGCACTCGAAATGCGGCATAGGTGCAAGCCTA 80
Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTT 8354
||| | ||||||||| | || |||||||||||
Sbjct 81 TCGGGGGTTCGAATCCCTCCCTCTCCGCCAGTT 113
>seq8237
Length=506431
Score = 82.4 bits (90), Expect = 3e-11
Identities = 85/110 (77%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 8250 CTTGACGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATA 8309
|||| || ||||||| ||||||||||| ||| ||||||| ||| |||||| | | |
Sbjct 133646 CTTG-CGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACGGACGAG 133588
Query 8310 CGTGCGAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTTTA 8359
||| ||| ||||||||||||||||||||| ||||||| | ||||
Sbjct 133587 GGTGTGAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCAAATATTTA 133538
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 197753430294222
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