Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq9587 461 3e-125 seq10635 315 3e-81 seq2892 95.1 5e-15 seq10271 93.3 2e-14 seq13842 91.5 6e-14 seq9481 87.8 7e-13 seq13715 84.2 9e-12 seq11045 82.4 3e-11 seq8237 82.4 3e-11 >seq9587 Length=50143 Score = 461 bits (510), Expect = 3e-125 Identities = 821/1176 (70%), Gaps = 54/1176 (5%) Strand=Plus/Minus Query 24136 TGCCCTTCCGGCCGAACCGCGCGCAGCGCCGGCTCCTGCGCCGCCTCTGGCACCGCAACG 24195 ||||||||||||| || ||||||||| || || | |||| ||||||||||||||| Sbjct 14416 TGCCCTTCCGGCCCAATCGCGCGCAGAAGCGTTTCATCAGCCGGCTCTGGCACCGCAACA 14357 Query 24196 TCATCCTGAAGGCCCGCCAGCTCGGCTTTACCACGCTCATCTGCATCATCTGGCTCGACC 24255 ||||||||||||| || ||||| ||||| ||||| || ||| |||| | ||||| |||| Sbjct 14356 TCATCCTGAAGGCGCGGCAGCTGGGCTTCACCACCCTGATCGCCATCCTGTGGCTGGACC 14297 Query 24256 ACGCGCTGTTCAACGCCAA-CAGCCGGTGCGGCATCATCGCGCAGGACCGCGAGACGGCC 24314 | ||||||||||| || | |||| | ||||||||||||||||| || ||||| | ||| Sbjct 14296 ATGCGCTGTTCAATGCGGATCAGC-GCTGCGGCATCATCGCGCACGATCGCGATTCAGCC 14238 Query 24315 GAGGCGATCTTTCGCGACAAGGTGAAGTTCGCCTACGACAACCTGCCCGAGGCGCTGNNN 24374 ||||| ||||| || ||||||||||||| ||||||||| ||||||||||||| | | Sbjct 14237 GAGGCCATCTTCCGGGACAAGGTGAAGTACGCCTACGAGAACCTGCCCGAGGAGAT---- 14182 Query 24375 NNNNNNATGCCGCT--CGCCAACTGCACGA-AGTCT----GAGATGTTGTTCGGCCACAN 24427 | ||||| | || || ||| ||| ||| || |||||| ||||| Sbjct 14181 ---TCGAGACCGCTTCCCCCTGGAGCGCGACAGTGCCGTGGAGCTGCTGTTCGCCCACAA 14125 Query 24428 NNNNNNNNNNNTCCGCGTCGCGACGTCCGTGCGCGGCGGCACGATCCACCGCCTGCACAT 24487 | ||||| || |||||| |||| ||||||||||| || || ||| | Sbjct 14124 CAACAGCAGCGTGCGCGTGGCTACGTCCATGCGGTCGGGCACGATCCATCGGCTCCACGT 14065 Query 24488 CTCCGAGTTCGGAAAGATCTGTGCGAAGTACCCGGACAAGGCCAAGGAGGTCGTGACCGG 24547 |||||| | || ||||||| || | |||| | |||||||||||||| ||||||| Sbjct 14064 CTCCGAACTGGGCAAGATCTCGGCACGCTTCCCGCATAAGGCCAAGGAGGTGATGACCGG 14005 Query 24548 CTCCATCCCGGCCGTGCCGAAGTCGGGCATTCTGGTCATCGAGTCGACGGCCGAGGGCCG 24607 |||||| ||||||||||| | | ||||| ||||| |||||| |||||||||||| Sbjct 14004 CTCCATTCCGGCCGTGCCCACCACCGGCATCCTGGTAATCGAGAGCACGGCCGAGGGCGC 13945 Query 24608 CGAGGGCGAGTTCTACGAGATCACGAAGCGGGCCGAGGC---GCTCGACCAGCAGAAGGA 24664 | | |||||||||||| | | | ||||||||||||| || | || ||| ||| | Sbjct 13944 CAACGGCGAGTTCTACCACCTGTCCCAGCGGGCCGAGGCCCTGCACTACACGCACAAGAA 13885 Query 24665 CCGGCCGCTGTCGCCGCGCGACTACCGGTTCCACTTTTATCCGTGGTTCGAGGAGCCGAA 24724 |||| ||||||||||| || |||||||| || |||||| ||||||| || Sbjct 13884 ------GCTGAGCCCGCGCGACTATCGCTTCCACTTCTACGCGTGGTGGCAGGAGCCCAA 13831 Query 24725 CTACCGCATGGACCCCGCCGGCGTC---GTCGTGACCGAGAAGGACGCCGAGTATTTCAC 24781 ||||||||||||| | | | ||| |||| | |||| || | ||| |||||| Sbjct 13830 CTACCGCATGGACGCGGGCCTGGTCCATGTCGCGCGCGAGCAGCA---CGACTATTTCGA 13774 Query 24782 GCAGGTCGAGG-CGCGCATGGGCGTG-ACGCTCGATGCCGAGCAGCGTGCTTGGTACGTC 24839 |||||||||| || | || | ||| || ||||| || ||||| || ||||| || Sbjct 13773 CCAGGTCGAGGTCGAG-AT-GCAGTGCACCATCGATCTGGAACAGCGGGCCTGGTATGTG 13716 Query 24840 GCCACGCGCGACGCAGACTTTTCCGGCAGCG-AGGAGCGTATGTGGCAGGAATACCCGTC 24898 ||||| | || || ||||| |||| ||| ||||| ||||||||||| ||||| || Sbjct 13715 GCCACCCAGGAGGCTGACTTCCCCGG-TGCGCCTGAGCGCATGTGGCAGGAGTACCCCTC 13657 Query 24899 CACCCCTGAAGAACCGTTCATGGTGTCGACCGAGGGCACCTACTACGCGCAGCAGCTCGC 24958 ||| || | || | ||| | ||| | || |||| |||||||| || | | Sbjct 13656 CACGCCGGCCGAGGCATTCCAGCAGTCCAGCGCGGGCCGGTACTACGCCAAGGCCATGGT 13597 Query 24959 CGCG-GCGCGCAAGCAAGGCCGCATCAAGCCGTCCCTGCCCGTGCTGTTCAACGTGCCGT 25017 ||| | || |||| ||| |||||| | || |||||| |||| | ||||| Sbjct 13596 TGCGCTCACG-AAGCGCGGCGGCATCA---CCTCGGTGCCCGAGCTG---GATCTGCCGG 13544 Query 25018 GCTTCACGTTCTGGGACATCGGCAACAGCGACGGCACGGCGATCTGGGTGTTCCAG-CGC 25076 || ||| |||||||| ||||| | ||||| ||||| |||||| | | ||| | | Sbjct 13543 TCTACACATTCTGGGATATCGGGCGCGCGGACGGGACGGCCATCTGGTTCATGCAGTCCC 13484 Query 25077 ATCGAGCACGAGTGGCGCTGCATCCGATTCAAGGAGG-GCTGGGGCGAGCCGTACAGCTT 25135 || | |||| |||| |||| | | | |||| || | | || | | | || Sbjct 13483 TGCGCG-GCGAGGACCGCTTCATCAACTACTACGAGGAGCACGAGGAAGACCTGCGGC-A 13426 Query 25136 CTACGTGAAGTGGCTCCAGGAGCTCGGCCTCGTGTGGGACACGATGTTCCTGCCGCACGA 25195 ||||||| || |||| |||||| ||||| | | | ||||||||||| || Sbjct 13425 CTACGTGCGCCACCTGCAGGGCCTCGGCTACGTGTTCGGCGGGCACTTCCTGCCGCATGA 13366 Query 25196 CGCCGACCACGTGCGTCAGGGTCAGACGACCAACAAGAGCC-CGAAGCAGATGCTCGAGG 25254 ||| | ||| ||| | | | | |||||| || || | |||||| ||| ||| Sbjct 13365 CGCGAATCACAAGCGCCTGAGCGA---TACCAAC-CGATCCACAAAGCAGCAGCTGCAGG 13310 Query 25255 AGCTGATGCCGGGCGTGCGCTTCGAGGTCGTGCCGC 25290 ||||||||||||| |||||| | ||| || |||| Sbjct 13309 CGCTGATGCCGGGCCAGCGCTTTGTGGTGGTTCCGC 13274 >seq10635 Length=172665 Score = 315 bits (348), Expect = 3e-81 Identities = 1351/2087 (65%), Gaps = 118/2087 (6%) Strand=Plus/Plus Query 53021 CTGGATTTGGACGGACACGAAGCGCGCCGACCGGCTCGTCAACTACTACAACGAGAACTT 53080 |||||| ||||| ||| | | ||| |||| ||||| | || || || ||| Sbjct 170426 CTGGATCTGGACCGACCCCGATCGCACCGATCGGCTGGGGCGGGTGTATAAAGACCCCTT 170485 Query 53081 C-AACAACATCGCGCCGCGCCAGTTCGACGGCTCGCACCTGACGCTGCCGGGCGTATCGC 53139 | |||||||||| ||||||| |||||||||||||| |||| ||||||||||| ||| | Sbjct 170486 CTAACAACATCGTGCCGCGCGCCTTCGACGGCTCGCATCTGAAGCTGCCGGGCGCATC-C 170544 Query 53140 TGCG-CTTCGACCTGCGCGAGAACCAGAAGCGCGCCATCTGGCGCGGCATTCAGGAAGGC 53198 ||| ||||| || ||| |||||||||||| |||||||||| ||| | ||| Sbjct 170545 GGCGCCTTCGTGCTCTACGATCACCAGAAGCGCGGCATCTGGCGCATCATCGCCGCGGGC 170604 Query 53199 GATATGTACCTCGCGCACGCTGTCGGCGCGGGCAAGACGTTCACGATGATCGCGACGGGC 53258 | | |||||||| ||||| |||||||| ||||| || | |||||| || | | Sbjct 170605 GCGACCTACCTCGCCCACGCCGTCGGCGCCGGCAAAACCATGACGATGGCGGCCGCCATC 170664 Query 53259 ATGGAGGAGCGTCGGCTCGGCCTGTCCAACAAGCCGATGTACGCGGTGCCGAACCACATG 53318 |||||| |||| ||||| |||||| | |||| ||||| | |||||| || Sbjct 170665 ATGGAGCAGCGCCGGCTTGGCCTGATCGCCAAGGCGATGCTTGTGGTGCCCGGTCATTGC 170724 Query 53319 CTCGCGCAATTCGCGCGCGAGTTCCTTGAGCTGTACCCGGCCGCGAACATCATGGTCGCG 53378 || ||||| ||||||||| || || | ||| || ||| ||| |||| | ||||| Sbjct 170725 CTGGCGCAGGCCGCGCGCGAATTTCTGGCGCTCTATCCGAACGCCCGCATCCTCGTCGCC 170784 Query 53379 GACGAGCAGAATTTCCACACCCACAACCGCCGCCGGTTCGTCGCGCAGGCCGCGCTCAAC 53438 |||||| || ||| || |||| || | || ||| | ||| ||| ||| | Sbjct 170785 GACGAGACCAACTTCAGCAAGGACAAGCGGCAGCGCTTCTTATCGCGGGCGGCGACCGCG 170844 Query 53439 AACCCGGACGCGATCATCATCACGCACTCGGCGTTCGGCCGCATCGGCATGTCCGACGAG 53498 | | ||||||||||||||||||||||||||| ||| || ||||||| || ||| Sbjct 170845 ACCTGGGACGCGATCATCATCACGCACTCGGCCTTCCGCTTCATCGGCGTG-CCG----- 170898 Query 53499 TACGCCTCGGCGTTC-ATCCGCGACCAGATC---GACGAG-TGGAAAGCCGCGCTCGACG 53553 ||||| ||| | | || | |||| |||||| |||| |||| ||| Sbjct 170899 ------TCGGCTTTCGAGCAGC-AGATGATCCAGGACGAGCTGGA-------GCTCTACG 170944 Query 53554 AGACG-----GA-CAAGG------GCGAC---CGCATCACGCGCAAGCAGATCGAGCGCC 53598 ||||| || ||||| ||||| ||| || ||||||||| |||| || | Sbjct 170945 AGACGCTGTTGACCAAGGTCGAAAGCGACGATCGCGTCTCGCGCAAGCGCCTCGAACGGC 171004 Query 53599 GCATCGNNNNNNNNNNNNNNNNGCTGGAGGCGAAACAGGGCGGCGAGAAGAAGGACAAGG 53658 | | |||||| | | || | | ||||| | Sbjct 171005 TGAAGGAGGGTCTGAAAGAGCGCCTGGAGTC------GCTCGCCACGCGCAAGGATGATC 171058 Query 53659 TGCTGTCGTTCGAGGAGCTGGGCGTCGACCGCCTGTTCGTCGACGAGTTCCACGAGTTCC 53718 | || | || |||| | |||||||||| | ||||||||||| || || |||| Sbjct 171059 TCCTCACCATCTCGGAGATCGGCGTCGACCAGATCATCGTCGACGAGGCGCAGGAATTCC 171118 Query 53719 GAAAACTCGACTTCGCGACGCAGCAGAGCAACATCAAGGGCATCGACCCGGCGGGCTCGC 53778 | || || |||||| ||| | | | | |||||| |||| || ||||||| Sbjct 171119 GCAAGCTGTCCTTCGCCACGAATATGTCGACGCTGAAGGGCGTCGATCCCAACGGCTCGC 171178 Query 53779 AGCGCGCGATGGACCTGTTCATGAAGGTCCAATACCTGCGCAGC-AAGAAGCCGGGCCGC 53837 |||| || |||||| | ||||| || || | | || | | ||||| || |||||| Sbjct 171179 AGCGTGCCTGGGACCTCTATGTGAAGTCCCGATTCAT-CGAAACGAAGAATCCCGGCCGC 171237 Query 53838 GCGCTCGTGGCCGCGTCCGGCACGCCGGTCACGAACACGATGGGCGAGCTCTACACCGCA 53897 ||||||||| ||||| ||||||||| |||| |||||| | |||||| | || | | Sbjct 171238 GCGCTCGTGCTGGCGTCTGGCACGCCGATCACCAACACGCTCGGCGAGATGTATTCGGTG 171297 Query 53898 CAACGCT-TCTTCCAGC-CCGAGCAGCTTGCCGAGGATGGTCTGGATACGTTCGACGCGT 53955 || |||| ||| | || || || |||| || || | ||||||||| | Sbjct 171298 CAGCGCTATCT--CGGCTACGCCGCCCTCCGCGAGCGGGGCTTGCACGAGTTCGACGCCT 171355 Query 53956 GGGC--CAACCAATACGGTGACATCGTTG--CGGGCTTCGAGCAGAACGCCGCCGGCGGC 54011 |||| ||||| | ||| ||| || | | || || |||||| | || ||||| | Sbjct 171356 GGGCCTCAACC--TTCGGCGACGTC-TCGACCGAGC-TCGAGCTTCAGCCCTCCGGCAGA 171411 Query 54012 TACGAGGTCGTGAGCCGGTTCGCGAAGTTCCAGAACGTGCCCGAGCTGATGCGCCGCG-T 54070 ||| || || | || ||||||| ||| || || ||||||||||| |||| | | Sbjct 171412 TACAAGCCGGTCACGCGCTTCGCGACCTTCGTCAATGTCCCCGAGCTGAT-CGCCATGTT 171470 Query 54071 GCGCTCGTTCATGGACATCCTGACGAGCCAGCAGCTCTCGCAG-TACGTGGATCGTCCGG 54129 || || ||| ||| | | | | || | || ||| | |||||| | ||||| Sbjct 171471 CCGGTCCTTCGCCGACGTGGTCATGGCGGAGGACCT-GCGCCGATACGTGAAGATTCCGG 171529 Query 54130 CGATCGAGGGCGGCGGCCGTCAGATCATGGTCACGCCGGAGC---CGTTCGGATACAAGG 54186 ||||| | |||| || ||||||||| ||| || ||| || || | |||| Sbjct 171530 CGATCTCGACCGGCAAGCGCCAGATCATG---ACGGCGAAGCCGACGGCCGCCTTCAAGC 171586 Query 54187 CGTACCAGAAGGCGCTCGAGCAGCGCATCACCGCGATCCGCAACCGCAAGGGGCCGCCGC 54246 |||||| |||||| |||||||| |||||| | ||| | | |||||| Sbjct 171587 GTTACCAGGTCCAGCTCGATGCGCGCATCAAGGCGATCGAGATGCGCGACCGTCCGCCGG 171646 Query 54247 AGAAGGGGCAGGACATCATCCTGAACGTGATCGCGGACGGCCGTTTCTCCGCGATCGACA 54306 || || | |||||| | || ||| ||| | |||||||| ||||||||||| Sbjct 171647 AGCCAGGCGACGACATCCTGCTCTCCGTCATCACCGACGGCCGCCATGCCGCGATCGACC 171706 Query 54307 TGCGCTTCGTCGA-CCCGACCGCGCCGAGCGACCCGAGCAGCAAGCTGAACCAGATGATC 54365 | ||| | ||||| || ||| | ||| ||| || || ||||||||||| ||||||| Sbjct 171707 TTCGCCTTGTCGATCCGGACAATGACGA-CGAGGCGGACAACAAGCTGAACCTGATGATC 171765 Query 54366 GACGCCGTGATCGCCGACTACCATGCGG----CGTCCGACTTCGAGTATTCG---ACGAA 54418 | || || ||| | | | |||| || ||||| || ||| | | | Sbjct 171766 G--GCAATG--CGCTGCGCATCTGGCGGGAAACGGCCGACAACGCCTATGTGCGTGCCGA 171821 Query 54419 CGGCAAGGTCGACCCGATCAAGGGCGCGTCGCACATCATCTTTACCGACATCGGGCTCGG 54478 ||||||| | | | | ||||| |||| || ||||| |||| ||||| | Sbjct 171822 CGGCAAGCCCTATGAGCTGCCCGGCGCCGCGCAGATGATCTTCTCCGATCTCGGGACC-- 171879 Query 54479 CGAGCAGTCGGCGAAGAACCGCGG--TTTCGACATGAAGGCGTGGATC-GAGAAGCGTCT 54535 | || || ||||| |||||| | ||| | | | || |||||| | || | | || Sbjct 171880 ATTTCCGT-GGAGAAGAGCCGCGGCTTCTCGGCCT-ATCGC-TGGATCAGGGACGAG-CT 171935 Query 54536 GGTCGACGGCGGCATCCCGCGCGAGC-AGATCGCGTTCATGCGCGACAACAAGGAGCATG 54594 | || | ||| | ||| ||| | ||||||| ||||||| ||| ||||| || | Sbjct 171936 GATCCGCATGGGCGTGCCG-GCGTCCGAGATCGCCTTCATGCAGGACTACAAGAAGTCGG 171994 Query 54595 CCAAGAAAGAGCGCCTGTTCGCGGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCG 54654 ||| |||||||||||| ||| |||||| ||||| ||| | ||||||||| Sbjct 171995 AGGCGAAGCAGCGCCTGTTCGGCGACGTGCGCGCCGGCAAGGTTCGCTTCCTGATCGGCT 172054 Query 54655 GCAAGGA---CATGGAAACCGGCGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATC 54711 | || |||| ||||||||||||| |||| ||||| | | | | || | Sbjct 172055 CCTCCGATACGATGGGCACCGGCGTCAACGCGCAGCTCCGCCTGAAGGCGCTGCATCACC 172114 Query 54712 TGGACGCGCCGTGGTTCCCGGCATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGG 54771 | |||| ||| ||| |||| | ||| ||||||||||| || ||| || |||| Sbjct 172115 TCGACGTGCCCTGGCTCCCCTCGCAGATCGCCCAGCGCGAGGGGCGGATCGAGCGCCAGG 172174 Query 54772 GCAACCAGAACAAGCAGGTGCGCATCCGCGCCTGGGCGA-CGAAGGGCAGCTACGACTCC 54830 |||| ||| || | | | || ||||| |||| |||||| || |||| || Sbjct 172175 GCAATCAGCACGACGTCATCGACGTCTTCGCCTATGCGACCGAAGGCTCACT-CGACGCC 172233 Query 54831 ACCATGTGGGGGATGAACGCCCGCAAGGCGCGGTTCATCGAACAGGCGCTCAACGGCGAC 54890 || |||||| || || | |||||||| || ||||||| ||||| |||||| Sbjct 172234 ACGATGTGGCAGAACAATGAGCGCAAGGCACGCTTCATCGCGGCCGCGCTTTCGGGCGAC 172293 Query 54891 GACAGCG-TGCGCTCGCTCGAGGACGT-GTCCGAGGCATCGGCA-----TTCGACATGGC 54943 || || | ||| || |||||| | | | |||| | || |||| ||||| Sbjct 172294 -ACCTCGATCCGCCGTCTGGAGGACCTCGGCGAAGGCCAGGCCAACCAGTTCGCGATGGC 172352 Query 54944 CGCCGCGCTGGCGTCGGGCGACGAGCGCTACATGAAGCT----GGCGGGCCTGAAGGCCG 54999 ||| | || ||||||||| |||| ||| ||| | ||||| ||| |||| Sbjct 172353 GAAGGCGATCGCATCGGGCGACCAGCG---TCTGATGCTCAAAGCCGGGCTCGAA-GCCG 172408 Query 55000 ACGTCGAGCGGCTGGAGCGCCTGAGCTACGCGCACCACGACGACCAG 55046 || ||| |||||| || || || || |||||| |||||| ||| Sbjct 172409 ACATCGCGCGGCTCGAACGGCTCCGCGCCGCGCATATCGACGATCAG 172455 Score = 82.4 bits (90), Expect = 3e-11 Identities = 195/286 (68%), Gaps = 13/286 (5%) Strand=Plus/Plus Query 52513 AGGAGGTCATCGACGCGCTCGGCACCGCGATCTACGAGGACCCGGCGAAGGGCT---GGC 52569 |||| || |||| || |||||||| ||| |||| | || ||| || | |||| ||| Sbjct 169892 AGGACGTGATCGCCGAGCTCGGCAGCGCCATCTTCCGCGATCCGTCGGACGGCTCCTGGC 169951 Query 52570 AGACGTCCGACGCGTACCTGTCGGGTAACGTCGTGCGCAAA-CTCGCCGAGGCGCAGGCC 52628 ||| ||||||| || || || || ||| || |||| |||| || ||| ||||| Sbjct 169952 AGAGCGCCGACGCCTATCTCTCCGGCGCGGTCC-GCTCAAAGCTCGTCGCGGCCGAGGCC 170010 Query 52629 GCGGC-GCGCAGCGACCGCAAGTACCAGCGCAACGTCGAGGCACTGCTGGCCGTGCAGCC 52687 |||| || | ||| | ||| ||||||| |||| ||| |||| | |||||||| Sbjct 170011 GCGGTAGCTCT-CGATCCAGCCTACGAGCGCAATGTCGCGGCGCTGCGCGATGTGCAGCC 170069 Query 52688 GAAGCCGCTC---GGCCCGAGCGACATCACGGTGAAGCTGGGCCAGAACTGGATTCCGGC 52744 |||| || ||||| | |||||||||| | ||| ||| | ||||||||||| Sbjct 170070 C--GCCGATCTCAGGCCCTCG-GACATCACGGCGCGGCTCGGCGCGCCGTGGATTCCGGC 170126 Query 52745 GGCCGACGTCGCCGTGTTCGCGAGCGAGGCGCTGAACGAGAACATC 52790 | |||| || || |||| | ||| || || || | ||||| Sbjct 170127 CGACGACATCATCGCCTTCGTCAAGGAGACGATGGGCGCGGACATC 170172 >seq2892 Length=791 Score = 95.1 bits (104), Expect = 5e-15 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 31033 AACAACCCGATCTTCAAGGGCGGCCTCGGCATGATCAACAACGTCGTGCTGCACAAGCAC 31092 || ||||||||||||| ||||| | ||| | |||| ||||| | |||||||||||| Sbjct 436 AAGAACCCGATCTTCACGGGCGCGATGGGCCTCTACAACGACGTCATCCTGCACAAGCAC 377 Query 31093 CGCAACGTGATCCGCTTCAACGATTACGGCGCGGGCGCCAACGTC 31137 ||||||||||| |||||| ||| ||||| || ||||| ||| || Sbjct 376 CGCAACGTGATTCGCTTCGGCGACTACGGTGCCGGCGCAAACCTC 332 >seq10271 Length=310985 Score = 93.3 bits (102), Expect = 2e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321 |||| |||||||||||||| |||||| || | | ||||| || ||||| ||| || ||| Sbjct 222560 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 222619 Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTT 8357 ||||| ||||||||| |||| |||||||| || || Sbjct 222620 TCGTGGGTTCGAATCCCACCCTCTCCGCCATTTGTT 222655 >seq13842 Length=4973 Score = 91.5 bits (100), Expect = 6e-14 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321 |||| |||||||||||||| |||||| || | | ||||| || ||||| ||| || ||| Sbjct 407 GGAGAGGTGGCAGAGTGGTCGAATGCACCGCACTCGAAATGCGGCATACCTGCAAGGGTA 348 Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCA 8351 ||||| ||||||||| |||| |||||||| Sbjct 347 TCGTGGGTTCGAATCCCACCCTCTCCGCCA 318 >seq9481 Length=228138 Score = 87.8 bits (96), Expect = 7e-13 Identities = 213/318 (67%), Gaps = 11/318 (3%) Strand=Plus/Minus Query 54560 GCAGATCGCGTTCATGCGCGACAACAAGGAGC---ATGCCAAGAAAGAGCGCCTGTTCGC 54616 ||||||||| ||||||| || |||| | | |||||| | ||| ||||||| Sbjct 6689 GCAGATCGCATTCATGCAGGATTACAAAAAAACCGAGGCCAAGCA---GCGTCTGTTCGG 6633 Query 54617 GGACATGCGCGAGGGCAAAAAGCGCGTGCTGATCGGCGGCAAGGA---CATGGAAACCGG 54673 || | |||| ||||| ||| | || ||||| | ||| ||||| ||||| Sbjct 6632 CGATGTCCGCGCCGGCAAGGTGCGTTTTCTCATCGGTTCCTCGGAAACCATGGGCACCGG 6573 Query 54674 CGTCAACGTGCAGAAGCGCCTCTACACCGAGGAGCATCTGGACGCGCCGTGGTTCCCGGC 54733 |||||| | ||| || | | | | ||||| |||| ||| ||| | ||| | Sbjct 6572 CGTCAATGCGCAACTTCGGTTGAAGGCGCTCCACCATCTCGACGTGCCATGGCTGCCGTC 6513 Query 54734 ATCCGTCGAGCAGCGCGAGGGCCGCATCATCCGTCAGGGCAACCAGAACAAGCAGGTGCG 54793 ||||||||||||||||| | ||| | || || ||||||||| | || |||| Sbjct 6512 GCAGATCGAGCAGCGCGAGGGCAGGATCGTTCGCCAAGGCAACCAGCATGAGGAGGTCGA 6453 Query 54794 CATCCGCGCCTGGGCGACGAAGGGCA-GCTACGACTCCACCATGTGGGGGATGAACGCCC 54852 ||| ||||| || ||| | ||| ||| ||| || |||||||| || |||| | Sbjct 6452 TATCTACGCCTATGCCACGGAAGGCTCGCTG-GACGCCTCCATGTGGCAGAGCAACGAGC 6394 Query 54853 GCAAGGCGCGGTTCATCG 54870 |||||||||| ||||||| Sbjct 6393 GCAAGGCGCGATTCATCG 6376 >seq13715 Length=7744 Score = 84.2 bits (92), Expect = 9e-12 Identities = 118/159 (74%), Gaps = 10/159 (6%) Strand=Plus/Plus Query 49044 GGCACGCTCGGCATTCCGCGCGATCAGATGCCGCAGGTGCCGACGCA----ATCGCACGG 49099 || || || ||| | ||||||| ||||||||||||| | ||| ||| ||||| || Sbjct 926 GGTACCCTGGGCGTGCCGCGCGCTCAGATGCCGCAGAT-CCG-CGCTGAGCATCGC--GG 981 Query 49100 CGGGCTCGTCAATCACCTGAACGCGCAGGGCATCGAGCACGAAACGA-AGATGGTGCCGG 49158 | || |||||| |||||| |||| ||||||||| | | || ||| | |||| | Sbjct 982 TGCCCTGGTCAATTTCCTGAAGGCGCGGGGCATCGACAGCAAGGCGGCAGA-GATGCCAG 1040 Query 49159 CGGCCGACCTGAAGCCGACGCAGGCCGAGTTCTCGCCCG 49197 | | |||||| || ||||||||||| || |||||||||| Sbjct 1041 CTGGCGACCTAAAACCGACGCAGGCGGAATTCTCGCCCG 1079 >seq11045 Length=10013 Score = 82.4 bits (90), Expect = 3e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 8262 GGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATACGTGCGAGCGTA 8321 |||| ||||||||||||| |||||| || | | ||||| || |||| |||| ||| || Sbjct 21 GGAGAGGTGGCAGAGTGGTTGAATGCACCGCACTCGAAATGCGGCATAGGTGCAAGCCTA 80 Query 8322 TCGTGAGTTCGAATCTCACCGCCTCCGCCAGTT 8354 ||| | ||||||||| | || ||||||||||| Sbjct 81 TCGGGGGTTCGAATCCCTCCCTCTCCGCCAGTT 113 >seq8237 Length=506431 Score = 82.4 bits (90), Expect = 3e-11 Identities = 85/110 (77%), Gaps = 1/110 (1%) Strand=Plus/Minus Query 8250 CTTGACGAACATGGAGGCGTGGCAGAGTGGTCTAATGCAGCGGATTTGAAATCCGTCATA 8309 |||| || ||||||| ||||||||||| ||| ||||||| ||| |||||| | | | Sbjct 133646 CTTG-CGCACATGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACGGACGAG 133588 Query 8310 CGTGCGAGCGTATCGTGAGTTCGAATCTCACCGCCTCCGCCAGTTTTTTA 8359 ||| ||| ||||||||||||||||||||| ||||||| | |||| Sbjct 133587 GGTGTGAGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCAAATATTTA 133538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197753430294222