Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_018856.1 Length=153962 Score E Sequences producing significant alignments: (Bits) Value seq7835 82.4 8e-11 >seq7835 Length=204203 Score = 82.4 bits (90), Expect = 8e-11 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 6762 GCCAT-GGAGGGTTGGCAGAGTGGATTATTGCAGCGGTCTTGAAAACCGCCGAGG--GTA 6818 ||||| ||| | |||||||| || ||| |||| ||||||||||||||| ||||| || Sbjct 60559 GCCATTGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTG 60618 Query 6819 AAACCTCCGTGAGTTCAAATCTCACACCCTCCTCCA 6854 | ||||||||||||| |||||||| | ||| ||| Sbjct 60619 AGTCCTCCGTGAGTTCGAATCTCACCGCTTCCGCCA 60654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492457683544080