Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_018860.1
Length=156176
Score E
Sequences producing significant alignments: (Bits) Value
seq11739 100 3e-16
>seq11739
Length=237542
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 17699 ATCCTAAAAGAAGGTAATCACAAAGGAGATCGTACTGGAACAGGTACTCGATCATTATTC 17758
|||||| | || || | ||||||| ||||||||||| ||||||||||| || ||||
Sbjct 9448 ATCCTAGACGATGGCGGTGACAAAGGTGATCGTACTGGTACAGGTACTCGTTCTGTATTT 9389
Query 17759 GGAGCACAAATGCGCTTTGATTTATCTAAAGGGTTCCCGATGCTAACAACAAAGAAACTC 17818
|| |||||||| ||||| || || |||||||| ||| | ||||| || || ||| |
Sbjct 9388 GGTCATCAAATGCGTTTTGACTTGTCAAAAGGGTTTCCGCTACTAACCACTAAAAAAATT 9329
Query 17819 CCGTTCCGAGTGATTGTGGAAGAGCTATTATGGTTTATTAGTGGAAGTACGAACGTTAAA 17878
| ||||| |||||| || || | ||||| | | || || |||||| ||
Sbjct 9328 CATTTCCGCTCCATTGTGATTGAACTGCTGTGGTTCCTAAAAGGCGACACCAACGTTCAA 9269
Query 17879 GATTTATTGGACAAGAATGTTCATATTTGGGATGA 17913
|| | ||||| || ||| |||||||||||
Sbjct 9268 TATCTTAAAGACAATAAAGTTTCGATTTGGGATGA 9234
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499541149919040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |