Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28] 15,059 sequences; 2,696,886,330 total letters Query= NC_018860.1 Length=156176 Score E Sequences producing significant alignments: (Bits) Value seq11739 100 3e-16 >seq11739 Length=237542 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 17699 ATCCTAAAAGAAGGTAATCACAAAGGAGATCGTACTGGAACAGGTACTCGATCATTATTC 17758 |||||| | || || | ||||||| ||||||||||| ||||||||||| || |||| Sbjct 9448 ATCCTAGACGATGGCGGTGACAAAGGTGATCGTACTGGTACAGGTACTCGTTCTGTATTT 9389 Query 17759 GGAGCACAAATGCGCTTTGATTTATCTAAAGGGTTCCCGATGCTAACAACAAAGAAACTC 17818 || |||||||| ||||| || || |||||||| ||| | ||||| || || ||| | Sbjct 9388 GGTCATCAAATGCGTTTTGACTTGTCAAAAGGGTTTCCGCTACTAACCACTAAAAAAATT 9329 Query 17819 CCGTTCCGAGTGATTGTGGAAGAGCTATTATGGTTTATTAGTGGAAGTACGAACGTTAAA 17878 | ||||| |||||| || || | ||||| | | || || |||||| || Sbjct 9328 CATTTCCGCTCCATTGTGATTGAACTGCTGTGGTTCCTAAAAGGCGACACCAACGTTCAA 9269 Query 17879 GATTTATTGGACAAGAATGTTCATATTTGGGATGA 17913 || | ||||| || ||| ||||||||||| Sbjct 9268 TATCTTAAAGACAATAAAGTTTCGATTTGGGATGA 9234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499541149919040