Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pantholops_20hodgsonii_20[refseq_20GCF_5F000400835.1_202013-05-28]
15,059 sequences; 2,696,886,330 total letters
Query= NC_019401.1
Length=358663
Score E
Sequences producing significant alignments: (Bits) Value
seq11739 107 4e-18
>seq11739
Length=237542
Score = 107 bits (118), Expect = 4e-18
Identities = 159/222 (72%), Gaps = 4/222 (2%)
Strand=Plus/Minus
Query 133957 TGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTC-AATTCTTCGTAAATG 134015
|||| || |||| | | || || ||||| || ||||| || |||| || || | |
Sbjct 9023 TGAAGCAGGTAAAGTTGCCTTACCGCCATGCCACA-CTTTATTCCAATTTTTTGTTCAGG 8965
Query 134016 ACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATTCTTAGGAGTACCAT 134075
| || ||||| || || || ||||||||||| ||| | |||||||| || ||||
Sbjct 8964 ATGGAAAGTTGTCTTGCCAACTTTATCAACGTAGTGCAGATGTTTTCTTAGGGGTGCCAT 8905
Query 134076 TCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGTTTGTGGGTTAGAAG 134135
| || ||||| ||| | |||| ||||||||| | || ||||||||||| |||| |
Sbjct 8904 TTAATATTGCCAGCTATGCTCTACTGACTCATATGGTTGCTCAAGTTTGTGGTTTAGGCG 8845
Query 134136 TTGGTGAGTTTGTATGGATGGGTGGAGATGTTCACATTTATA 134177
| ||||| ||||| |||| || || || | ||||||||||
Sbjct 8844 TAGGTGATTTTGTCTGGACTGGCGGTGA--TACACATTTATA 8805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1147368979963382
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |